RNA–Protein interactions for RNA: ENST00000511896.5

APBB3-219, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 2

Gene APBB3, Length 2,032 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-219	ENST00000511896	C3orf56	Q8N813	242 aa		13.64	□□□□□ -0.23
APBB3-219	ENST00000511896		X6R8D5	127 aa		13.64	□□□□□ -0.23
APBB3-219	ENST00000511896	EMP1	P54849	157 aa		13.64	□□□□□ -0.23
APBB3-219	ENST00000511896	PMVK	Q15126	192 aa		13.64	□□□□□ -0.23
APBB3-219	ENST00000511896	SLC25A29	Q8N8R3	303 aa		13.64	□□□□□ -0.23
APBB3-219	ENST00000511896	TRBV10-1	A0A0K0K1A3	114 aa		13.63	□□□□□ -0.23
APBB3-219	ENST00000511896		K7EQD1	137 aa		13.63	□□□□□ -0.23
APBB3-219	ENST00000511896	NMU	P48645	174 aa		13.63	□□□□□ -0.23
APBB3-219	ENST00000511896	TRBV7-3	A0A075B6L6	115 aa		13.63	□□□□□ -0.23
APBB3-219	ENST00000511896	IGKV2D-26	A0A0A0MRZ7	120 aa		13.63	□□□□□ -0.23
APBB3-219	ENST00000511896	BOD1L2	Q8IYS8	172 aa		13.63	□□□□□ -0.23
APBB3-219	ENST00000511896	ZNRF2	Q8NHG8	242 aa		13.63	□□□□□ -0.23
APBB3-219	ENST00000511896	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.63	□□□□□ -0.23
APBB3-219	ENST00000511896	CST9L	Q9H4G1	147 aa		13.63	□□□□□ -0.23
APBB3-219	ENST00000511896	IGHV3-38	A0A0C4DH36	116 aa		13.62	□□□□□ -0.23
APBB3-219	ENST00000511896	SMIM9	A6NGZ8	99 aa		13.62	□□□□□ -0.23
APBB3-219	ENST00000511896	OPRPN	Q99935	248 aa	Predicted RBP	13.62	□□□□□ -0.23
APBB3-219	ENST00000511896	CIDEA	O60543	219 aa		13.61	□□□□□ -0.23
APBB3-219	ENST00000511896	APOC4	P55056	127 aa		13.61	□□□□□ -0.23
APBB3-219	ENST00000511896	PCP2	Q8IVA1	136 aa		13.61	□□□□□ -0.23
APBB3-219	ENST00000511896	CHCHD7	Q9BUK0	85 aa		13.61	□□□□□ -0.23
APBB3-219	ENST00000511896	MAST4	O15021	2626 aa		13.61	□□□□□ -0.23
APBB3-219	ENST00000511896	RPL36A	P83881	106 aa	Known RBP	13.61	□□□□□ -0.23
APBB3-219	ENST00000511896	COTL1	Q14019	142 aa		13.61	□□□□□ -0.23
APBB3-219	ENST00000511896	BATF	Q16520	125 aa		13.61	□□□□□ -0.23
APBB3-219	ENST00000511896	SHISA2	Q6UWI4	295 aa		13.61	□□□□□ -0.23
APBB3-219	ENST00000511896	RPL36AL	Q969Q0	106 aa	Known RBP	13.61	□□□□□ -0.23
APBB3-219	ENST00000511896	OXLD1	Q5BKU9	147 aa		13.6	□□□□□ -0.23
APBB3-219	ENST00000511896	DLEU1	O43261	78 aa		13.59	□□□□□ -0.23
APBB3-219	ENST00000511896	DEFB135	Q30KP9	77 aa		13.59	□□□□□ -0.23
APBB3-219	ENST00000511896	C2orf91	Q6ZV80	131 aa		13.59	□□□□□ -0.23
APBB3-219	ENST00000511896	PYGO1	Q9Y3Y4	419 aa		13.59	□□□□□ -0.23
APBB3-219	ENST00000511896	IGLV4-69	A0A075B6H9	119 aa		13.59	□□□□□ -0.23
APBB3-219	ENST00000511896	IGLV4-3	A0A075B6K6	122 aa		13.58	□□□□□ -0.24
APBB3-219	ENST00000511896	HINT1	P49773	126 aa	Predicted RBP	13.58	□□□□□ -0.24
APBB3-219	ENST00000511896	LINC00612	Q8N6U2	182 aa		13.58	□□□□□ -0.24
APBB3-219	ENST00000511896	TRBV6-4	A0A1B0GX49	114 aa		13.57	□□□□□ -0.24
APBB3-219	ENST00000511896	IGHV4-30-4	P0DP06	118 aa		13.57	□□□□□ -0.24
APBB3-219	ENST00000511896	FAM104A	Q969W3	186 aa		13.57	□□□□□ -0.24
APBB3-219	ENST00000511896	TRGV4	A0A0C4DH28	118 aa		13.57	□□□□□ -0.24
APBB3-219	ENST00000511896	DEFB130B	P0DP73	79 aa		13.57	□□□□□ -0.24
APBB3-219	ENST00000511896	DEFB130A	P0DP74	79 aa		13.57	□□□□□ -0.24
APBB3-219	ENST00000511896	UBE2D3	P61077	147 aa		13.57	□□□□□ -0.24
APBB3-219	ENST00000511896	UBE2D2	P62837	147 aa		13.57	□□□□□ -0.24
APBB3-219	ENST00000511896	C12orf54	Q6X4T0	127 aa		13.57	□□□□□ -0.24
APBB3-219	ENST00000511896	TTTY13	Q9BZ97	58 aa		13.57	□□□□□ -0.24
APBB3-219	ENST00000511896	C11orf86	A6NJI1	115 aa		13.56	□□□□□ -0.24
APBB3-219	ENST00000511896	FHL2	Q14192	279 aa		13.56	□□□□□ -0.24
APBB3-219	ENST00000511896	MPV17L2	Q567V2	206 aa		13.56	□□□□□ -0.24
APBB3-219	ENST00000511896	PAPPA-AS1	Q5QFB9	102 aa		13.56	□□□□□ -0.24
APBB3-219	ENST00000511896	DAZ4	Q86SG3	579 aa	Known RBP	13.56	□□□□□ -0.24
APBB3-219	ENST00000511896	DAZ3	Q9NR90	486 aa	Known RBP	13.56	□□□□□ -0.24
APBB3-219	ENST00000511896	COL6A5	A8TX70	2615 aa		13.56	□□□□□ -0.24
APBB3-219	ENST00000511896	GAGE12J	A6NER3	117 aa		13.56	□□□□□ -0.24
APBB3-219	ENST00000511896	GAGE1	Q13065	139 aa		13.56	□□□□□ -0.24
APBB3-219	ENST00000511896	GAGE4	Q13068	117 aa		13.56	□□□□□ -0.24
APBB3-219	ENST00000511896	GAGE5	Q13069	117 aa		13.56	□□□□□ -0.24
APBB3-219	ENST00000511896	GAGE13	Q4V321	117 aa		13.56	□□□□□ -0.24
APBB3-219	ENST00000511896	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.56	□□□□□ -0.24
APBB3-219	ENST00000511896	VCX2	Q9H322	139 aa		13.56	□□□□□ -0.24
APBB3-219	ENST00000511896	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.55	□□□□□ -0.24
APBB3-219	ENST00000511896	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.55	□□□□□ -0.24
APBB3-219	ENST00000511896	OR11H2	Q8NH07	326 aa		13.55	□□□□□ -0.24
APBB3-219	ENST00000511896	UBE2D4	Q9Y2X8	147 aa		13.55	□□□□□ -0.24
APBB3-219	ENST00000511896	PKD1L1	Q8TDX9	2849 aa		13.55	□□□□□ -0.24
APBB3-219	ENST00000511896		A0A1B0GV90	55 aa		13.54	□□□□□ -0.24
APBB3-219	ENST00000511896	SPANXA1	Q9NS26	97 aa		13.54	□□□□□ -0.24
APBB3-219	ENST00000511896	SIVA1	O15304	175 aa		13.54	□□□□□ -0.24
APBB3-219	ENST00000511896	NPS	P0C0P6	89 aa		13.54	□□□□□ -0.24
APBB3-219	ENST00000511896	LOC100131303	A0A0U1RQF7	123 aa		13.53	□□□□□ -0.24
APBB3-219	ENST00000511896	CRYBA4	P53673	196 aa		13.53	□□□□□ -0.24
APBB3-219	ENST00000511896	KRTAP10-11	P60412	298 aa		13.53	□□□□□ -0.24
APBB3-219	ENST00000511896	AMELX	Q99217	191 aa		13.53	□□□□□ -0.24
APBB3-219	ENST00000511896	TRAV8-6	A0A0B4J262	113 aa		13.52	□□□□□ -0.24
APBB3-219	ENST00000511896	COL5A1-AS1	Q5SY13	56 aa		13.52	□□□□□ -0.24
APBB3-219	ENST00000511896	NTM-AS1	Q6ZSK4	140 aa		13.52	□□□□□ -0.24
APBB3-219	ENST00000511896	FAM222A	Q5U5X8	452 aa		13.52	□□□□□ -0.25
APBB3-219	ENST00000511896	NFE4	Q86UQ8	179 aa		13.52	□□□□□ -0.25
APBB3-219	ENST00000511896		E9PLD3	99 aa		13.51	□□□□□ -0.25
APBB3-219	ENST00000511896	EGFEM1P	Q0D2K5	195 aa		13.51	□□□□□ -0.25
APBB3-219	ENST00000511896	LYRM9	A8MSI8	78 aa		13.51	□□□□□ -0.25
APBB3-219	ENST00000511896	TMEM97	Q5BJF2	176 aa		13.51	□□□□□ -0.25
APBB3-219	ENST00000511896	MAPKAPK5-AS1	Q8N8E1	139 aa		13.51	□□□□□ -0.25
APBB3-219	ENST00000511896	PRADC1	Q9BSG0	188 aa		13.51	□□□□□ -0.25
APBB3-219	ENST00000511896	IGHV4-28	A0A0C4DH34	117 aa		13.5	□□□□□ -0.25
APBB3-219	ENST00000511896	DEFB4A	O15263	64 aa		13.5	□□□□□ -0.25
APBB3-219	ENST00000511896	BVES-AS1	Q5T3Y7	98 aa		13.5	□□□□□ -0.25
APBB3-219	ENST00000511896	RNF183	Q96D59	192 aa		13.5	□□□□□ -0.25
APBB3-219	ENST00000511896	TMEM170B	Q5T4T1	132 aa		13.49	□□□□□ -0.25
APBB3-219	ENST00000511896	CHAC1	Q9BUX1	264 aa		13.49	□□□□□ -0.25
APBB3-219	ENST00000511896	TRBV25-1	A0A075B6N4	114 aa		13.49	□□□□□ -0.25
APBB3-219	ENST00000511896	MIF	P14174	115 aa		13.49	□□□□□ -0.25
APBB3-219	ENST00000511896	RNASE13	Q5GAN3	156 aa	Known RBP	13.49	□□□□□ -0.25
APBB3-219	ENST00000511896		Q8NAQ8	132 aa		13.49	□□□□□ -0.25
APBB3-219	ENST00000511896	TIMM21	Q9BVV7	248 aa		13.49	□□□□□ -0.25
APBB3-219	ENST00000511896	GTSF1L	Q9H1H1	148 aa		13.49	□□□□□ -0.25
APBB3-219	ENST00000511896		A0A0J9YXV3	536 aa		13.48	□□□□□ -0.25
APBB3-219	ENST00000511896	LINC00694	P0DN24	101 aa		13.47	□□□□□ -0.25
APBB3-219	ENST00000511896		Q6ZUT4	128 aa		13.47	□□□□□ -0.25
APBB3-219	ENST00000511896	HIGD1B	Q9P298	99 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 229 ms