RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 SNURFQ9Y675 71 aa2.81□□□□□ -1.96
NEDD4-209ENST00000508871 MED12LQ86YW9 2145 aa2.81□□□□□ -1.96
NEDD4-209ENST00000508871 IGHV3-43A0A0B4J1X8 118 aa2.81□□□□□ -1.96
NEDD4-209ENST00000508871 IGHV3-35A0A0C4DH35 117 aa2.81□□□□□ -1.96
NEDD4-209ENST00000508871 E7EQL1 145 aa2.81□□□□□ -1.96
NEDD4-209ENST00000508871 PPP1R17O96001 155 aa2.81□□□□□ -1.96
NEDD4-209ENST00000508871 C7orf33Q8WU49 177 aa2.81□□□□□ -1.96
NEDD4-209ENST00000508871 TIMM21Q9BVV7 248 aa2.81□□□□□ -1.96
NEDD4-209ENST00000508871 WFDC10AQ9H1F0 79 aa2.81□□□□□ -1.96
NEDD4-209ENST00000508871 IGHV3-23P01764 117 aa2.81□□□□□ -1.96
NEDD4-209ENST00000508871 SYCNQ0VAF6 134 aa2.81□□□□□ -1.96
NEDD4-209ENST00000508871 C20orf197Q8N268 126 aa2.81□□□□□ -1.96
NEDD4-209ENST00000508871 SCRT1Q9BWW7 348 aa2.81□□□□□ -1.96
NEDD4-209ENST00000508871 MUC21A0A140T8X8 626 aa2.81□□□□□ -1.96
NEDD4-209ENST00000508871 A8MWP4 228 aa2.81□□□□□ -1.96
NEDD4-209ENST00000508871 RHOHQ15669 191 aa2.81□□□□□ -1.96
NEDD4-209ENST00000508871 RNF185Q96GF1 192 aa2.81□□□□□ -1.96
NEDD4-209ENST00000508871 TRAV21A0A0B4J279 112 aa2.8□□□□□ -1.96
NEDD4-209ENST00000508871 H3BQ85 93 aa2.8□□□□□ -1.96
NEDD4-209ENST00000508871 IGLV2-8P01709 118 aa2.8□□□□□ -1.96
NEDD4-209ENST00000508871 Q8N976 141 aa2.8□□□□□ -1.96
NEDD4-209ENST00000508871 ZNF702PQ9H963 129 aa2.8□□□□□ -1.96
NEDD4-209ENST00000508871 TP73-AS1Q9UF72 201 aa2.8□□□□□ -1.96
NEDD4-209ENST00000508871 DEFB108AA8MXU0 73 aa2.8□□□□□ -1.96
NEDD4-209ENST00000508871 IGKV1-16P04430 117 aa2.8□□□□□ -1.96
NEDD4-209ENST00000508871 RNASE13Q5GAN3 156 aaKnown RBP2.8□□□□□ -1.96
NEDD4-209ENST00000508871 NOTCH2NLQ7Z3S9 236 aa2.8□□□□□ -1.96
NEDD4-209ENST00000508871 SPAG11BQ08648 103 aa2.8□□□□□ -1.96
NEDD4-209ENST00000508871 SPAG11AQ6PDA7 123 aa2.8□□□□□ -1.96
NEDD4-209ENST00000508871 HEPN1Q6WQI6 88 aa2.8□□□□□ -1.96
NEDD4-209ENST00000508871 WFDC9Q8NEX5 89 aa2.8□□□□□ -1.96
NEDD4-209ENST00000508871 PRR15LQ9BU68 103 aa2.8□□□□□ -1.96
NEDD4-209ENST00000508871 ORMDL1Q9P0S3 153 aa2.8□□□□□ -1.96
NEDD4-209ENST00000508871 BRWD1Q9NSI6 2320 aa2.8□□□□□ -1.96
NEDD4-209ENST00000508871 C20orf78Q9BR46 151 aa2.8□□□□□ -1.96
NEDD4-209ENST00000508871 NMBP08949 121 aa2.79□□□□□ -1.96
NEDD4-209ENST00000508871 HILPDAQ9Y5L2 63 aa2.79□□□□□ -1.96
NEDD4-209ENST00000508871 IGLV1-47P01700 117 aa2.79□□□□□ -1.96
NEDD4-209ENST00000508871 SERF2P84101 59 aa2.79□□□□□ -1.96
NEDD4-209ENST00000508871 PSENENQ9NZ42 101 aa2.79□□□□□ -1.96
NEDD4-209ENST00000508871 MRPL36Q9P0J6 103 aaKnown RBP2.79□□□□□ -1.96
NEDD4-209ENST00000508871 TRAV40A0A0B4J280 105 aa2.79□□□□□ -1.96
NEDD4-209ENST00000508871 C15orf32Q32M92 178 aa2.79□□□□□ -1.96
NEDD4-209ENST00000508871 C1orf134Q5TEV5 83 aa2.79□□□□□ -1.96
NEDD4-209ENST00000508871 TRGV9Q99603 122 aa2.79□□□□□ -1.96
NEDD4-209ENST00000508871 MDKP21741 143 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-209ENST00000508871 ZFAND2AQ8N6M9 145 aa2.79□□□□□ -1.96
NEDD4-209ENST00000508871 DIRC1Q969H9 104 aa2.79□□□□□ -1.96
NEDD4-209ENST00000508871 PLXNB1O43157 2135 aa2.79□□□□□ -1.96
NEDD4-209ENST00000508871 SH2D6Q7Z4S9 175 aa2.79□□□□□ -1.96
NEDD4-209ENST00000508871 LINC00643Q86TS7 51 aa2.79□□□□□ -1.96
NEDD4-209ENST00000508871 TMEM14BQ9NUH8 114 aa2.79□□□□□ -1.96
NEDD4-209ENST00000508871 MED13Q9UHV7 2174 aa2.79□□□□□ -1.96
NEDD4-209ENST00000508871 PLGLAQ15195 96 aa2.78□□□□□ -1.96
NEDD4-209ENST00000508871 SPRNQ5BIV9 151 aa2.78□□□□□ -1.96
NEDD4-209ENST00000508871 MINOS1Q5TGZ0 78 aa2.78□□□□□ -1.96
NEDD4-209ENST00000508871 CTSGP08311 255 aa2.78□□□□□ -1.96
NEDD4-209ENST00000508871 SAA2P0DJI9 122 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-209ENST00000508871 ATXN8Q156A1 80 aa2.78□□□□□ -1.96
NEDD4-209ENST00000508871 LINC00337Q8N6G1 96 aa2.78□□□□□ -1.96
NEDD4-209ENST00000508871 CDH23Q9H251 3354 aa2.78□□□□□ -1.96
NEDD4-209ENST00000508871 IGKV2D-24A0A075B6R9 120 aa2.78□□□□□ -1.96
NEDD4-209ENST00000508871 IGLV2-23P01705 113 aa2.78□□□□□ -1.96
NEDD4-209ENST00000508871 TXNDC17Q9BRA2 123 aa2.78□□□□□ -1.96
NEDD4-209ENST00000508871 DSCAML1Q8TD84 2053 aa2.78□□□□□ -1.96
NEDD4-209ENST00000508871 TRIOBPQ9H2D6 2365 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 IGKV2-24A0A0C4DH68 120 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 IGLC7A0M8Q6 106 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 ODF3BA8MYP8 253 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 HCG22E2RYF7 251 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 EFNA4P52798 201 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 PRCDQ00LT1 54 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 Q0VG73 95 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 KLK9Q2XQG4 91 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 C2orf83Q53S99 150 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 C9orf116Q5BN46 136 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-209ENST00000508871 UNQ9165/PRO28630Q6UXU0 137 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 TMEM167AQ8TBQ9 72 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 IGHV3-64A0A075B6Q5 118 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 TRAV12-3A0A0B4J271 114 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 IGKV3D-20A0A0C4DH25 116 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 LY6LH3BQJ8 138 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 LIMD2Q9BT23 127 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 ZNF580Q9UK33 172 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 C5orf42Q9H799 3197 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 SYS1-DBNDD2H3BUS1 97 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 M0R3E3 92 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 IGLC2P0DOY2 106 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 IGLC3P0DOY3 106 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 BRWD1-AS2P59051 145 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 CIRBP-AS1Q8TBR5 109 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 CACNA1GO43497 2377 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 XIRP2A4UGR9 3374 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 IGKV3-20P01619 116 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 ZNF22P17026 224 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-209ENST00000508871 C18orf65Q6ZTR6 163 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 B9D2Q9BPU9 175 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 ESPL1Q14674 2120 aa2.77□□□□□ -1.97
NEDD4-209ENST00000508871 HEATR1Q9H583 2144 aaKnown RBP2.76□□□□□ -1.97
NEDD4-209ENST00000508871 CFC1BP0CG36 223 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms