RNA–Protein interactions for RNA: ENST00000503080.1

UBE2B-203, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-203ENST00000503080 SPCS1Q9Y6A9 102 aa-0.52□□□□□ -2.49
UBE2B-203ENST00000503080 PKDREJQ9NTG1 2253 aa-0.53□□□□□ -2.49
UBE2B-203ENST00000503080 CCL18P55774 89 aa-0.53□□□□□ -2.49
UBE2B-203ENST00000503080 RPS25P62851 125 aaKnown RBP-0.53□□□□□ -2.49
UBE2B-203ENST00000503080 SMIM21Q3B7S5 101 aa-0.53□□□□□ -2.49
UBE2B-203ENST00000503080 MAFIPQ8WZ33 124 aa-0.53□□□□□ -2.49
UBE2B-203ENST00000503080 MYCBP2O75592 4640 aa-0.53□□□□□ -2.5
UBE2B-203ENST00000503080 BCE1O60756 84 aa-0.54□□□□□ -2.5
UBE2B-203ENST00000503080 SPAG11BQ08648 103 aa-0.54□□□□□ -2.5
UBE2B-203ENST00000503080 ANP32BQ92688 251 aaKnown RBP-0.54□□□□□ -2.5
UBE2B-203ENST00000503080 SDF2Q99470 211 aa-0.54□□□□□ -2.5
UBE2B-203ENST00000503080 R4GMQ9 66 aa-0.54□□□□□ -2.5
UBE2B-203ENST00000503080 SIPA1L3O60292 1781 aaPredicted RBP-0.55□□□□□ -2.5
UBE2B-203ENST00000503080 TENM2Q9NT68 2774 aa-0.55□□□□□ -2.5
UBE2B-203ENST00000503080 IFT172Q9UG01 1749 aa-0.55□□□□□ -2.5
UBE2B-203ENST00000503080 C2CD3Q4AC94 2353 aa-0.55□□□□□ -2.5
UBE2B-203ENST00000503080 SPRR2DP22532 72 aa-0.55□□□□□ -2.5
UBE2B-203ENST00000503080 HAMPP81172 84 aa-0.55□□□□□ -2.5
UBE2B-203ENST00000503080 ALX1Q15699 326 aa-0.55□□□□□ -2.5
UBE2B-203ENST00000503080 TCEAL4Q96EI5 215 aa-0.55□□□□□ -2.5
UBE2B-203ENST00000503080 PDZD2O15018 2839 aa-0.56□□□□□ -2.5
UBE2B-203ENST00000503080 LRRC37A3O60309 1634 aa-0.56□□□□□ -2.5
UBE2B-203ENST00000503080 DCHS2Q6V1P9 2916 aa-0.56□□□□□ -2.5
UBE2B-203ENST00000503080 PLCE1Q9P212 2302 aa-0.56□□□□□ -2.5
UBE2B-203ENST00000503080 PKD1L1Q8TDX9 2849 aa-0.56□□□□□ -2.5
UBE2B-203ENST00000503080 HCG22E2RYF7 251 aa-0.56□□□□□ -2.5
UBE2B-203ENST00000503080 M0R135 149 aa-0.56□□□□□ -2.5
UBE2B-203ENST00000503080 SIX6O95475 246 aa-0.56□□□□□ -2.5
UBE2B-203ENST00000503080 SPRR1AP35321 89 aa-0.56□□□□□ -2.5
UBE2B-203ENST00000503080 SMCO1Q147U7 214 aa-0.56□□□□□ -2.5
UBE2B-203ENST00000503080 TMEM191AQ9H0A3 160 aa-0.56□□□□□ -2.5
UBE2B-203ENST00000503080 ZNF518AQ6AHZ1 1483 aa-0.56□□□□□ -2.5
UBE2B-203ENST00000503080 IFT140Q96RY7 1462 aa-0.56□□□□□ -2.5
UBE2B-203ENST00000503080 CTXND1A0A1B0GTU2 59 aa-0.57□□□□□ -2.5
UBE2B-203ENST00000503080 PRM1P04553 51 aa-0.57□□□□□ -2.5
UBE2B-203ENST00000503080 C10orf128Q5T292 105 aa-0.57□□□□□ -2.5
UBE2B-203ENST00000503080 SMIM4Q8WVI0 70 aa-0.57□□□□□ -2.5
UBE2B-203ENST00000503080 MAP1AP78559 2803 aaPredicted RBP-0.58□□□□□ -2.5
UBE2B-203ENST00000503080 TRAV13-2A0A0B4J235 113 aa-0.58□□□□□ -2.5
UBE2B-203ENST00000503080 HIST1H1DP16402 221 aaKnown RBP-0.58□□□□□ -2.5
UBE2B-203ENST00000503080 S100A3P33764 101 aa-0.58□□□□□ -2.5
UBE2B-203ENST00000503080 RBM3P98179 157 aaKnown RBP-0.58□□□□□ -2.5
UBE2B-203ENST00000503080 DPH3Q96FX2 82 aa-0.58□□□□□ -2.5
UBE2B-203ENST00000503080 AQP10Q96PS8 301 aa-0.58□□□□□ -2.5
UBE2B-203ENST00000503080 AGPAT4-IT1Q9H0P7 198 aa-0.58□□□□□ -2.5
UBE2B-203ENST00000503080 HECTD4Q9Y4D8 3996 aa-0.58□□□□□ -2.5
UBE2B-203ENST00000503080 TP53AIP1Q9HCN2 124 aa-0.59□□□□□ -2.5
UBE2B-203ENST00000503080 CCDC167Q9P0B6 97 aa-0.59□□□□□ -2.5
UBE2B-203ENST00000503080 KMT2CQ8NEZ4 4911 aaKnown RBP-0.59□□□□□ -2.5
UBE2B-203ENST00000503080 SPTBN1Q01082 2364 aaKnown RBP-0.6□□□□□ -2.5
UBE2B-203ENST00000503080 MYH8P13535 1937 aa-0.6□□□□□ -2.5
UBE2B-203ENST00000503080 FXYD6-FXYD2A0A087WZ82 144 aa-0.6□□□□□ -2.51
UBE2B-203ENST00000503080 SPAARA0A1B0GVQ0 90 aa-0.6□□□□□ -2.51
UBE2B-203ENST00000503080 SPAG11AQ6PDA7 123 aa-0.6□□□□□ -2.51
UBE2B-203ENST00000503080 PDCD10Q9BUL8 212 aa-0.6□□□□□ -2.51
UBE2B-203ENST00000503080 PCLOQ9Y6V0 5065 aa-0.6□□□□□ -2.51
UBE2B-203ENST00000503080 BSNQ9UPA5 3926 aa-0.6□□□□□ -2.51
UBE2B-203ENST00000503080 HERC1Q15751 4861 aa-0.6□□□□□ -2.51
UBE2B-203ENST00000503080 ALMS1Q8TCU4 4167 aa-0.6□□□□□ -2.51
UBE2B-203ENST00000503080 MRC1P22897 1456 aa-0.61□□□□□ -2.51
UBE2B-203ENST00000503080 PPRC1Q5VV67 1664 aaKnown RBP-0.61□□□□□ -2.51
UBE2B-203ENST00000503080 VWFP04275 2813 aa-0.61□□□□□ -2.51
UBE2B-203ENST00000503080 MYH6P13533 1939 aa-0.61□□□□□ -2.51
UBE2B-203ENST00000503080 LOC105371267A0A1B0GV96 52 aa-0.61□□□□□ -2.51
UBE2B-203ENST00000503080 TTC9CQ8N5M4 171 aa-0.61□□□□□ -2.51
UBE2B-203ENST00000503080 PFDN5Q99471 154 aa-0.61□□□□□ -2.51
UBE2B-203ENST00000503080 V9GYH0 126 aa-0.61□□□□□ -2.51
UBE2B-203ENST00000503080 PXDNQ92626 1479 aa-0.61□□□□□ -2.51
UBE2B-203ENST00000503080 NF1P21359 2839 aa-0.61□□□□□ -2.51
UBE2B-203ENST00000503080 ERCC6L2Q5T890 1561 aa-0.62□□□□□ -2.51
UBE2B-203ENST00000503080 C10orf71Q711Q0 1435 aa-0.62□□□□□ -2.51
UBE2B-203ENST00000503080 FAT2Q9NYQ8 4349 aa-0.62□□□□□ -2.51
UBE2B-203ENST00000503080 PIGBOS1A0A0B4J2F0 54 aa-0.62□□□□□ -2.51
UBE2B-203ENST00000503080 DCDP81605 110 aaKnown RBP-0.62□□□□□ -2.51
UBE2B-203ENST00000503080 KRTAP20-2Q3LI61 65 aa-0.62□□□□□ -2.51
UBE2B-203ENST00000503080 LENEPQ9Y5L5 61 aa-0.62□□□□□ -2.51
UBE2B-203ENST00000503080 WNK3Q9BYP7 1800 aa-0.62□□□□□ -2.51
UBE2B-203ENST00000503080 CHD6Q8TD26 2715 aa-0.62□□□□□ -2.51
UBE2B-203ENST00000503080 COL6A3P12111 3177 aa-0.62□□□□□ -2.51
UBE2B-203ENST00000503080 LRP6O75581 1613 aa-0.63□□□□□ -2.51
UBE2B-203ENST00000503080 PLXNB2O15031 1838 aa-0.63□□□□□ -2.51
UBE2B-203ENST00000503080 MAP1BP46821 2468 aaKnown RBP-0.63□□□□□ -2.51
UBE2B-203ENST00000503080 ARPC4P59998 168 aa-0.64□□□□□ -2.51
UBE2B-203ENST00000503080 KRTAP19-8Q3LI54 63 aa-0.64□□□□□ -2.51
UBE2B-203ENST00000503080 TMEM170BQ5T4T1 132 aa-0.64□□□□□ -2.51
UBE2B-203ENST00000503080 COPS9Q8WXC6 57 aa-0.64□□□□□ -2.51
UBE2B-203ENST00000503080 CEP152O94986 1710 aa-0.64□□□□□ -2.51
UBE2B-203ENST00000503080 NBEAL1Q6ZS30 2694 aa-0.64□□□□□ -2.51
UBE2B-203ENST00000503080 WNK1Q9H4A3 2382 aa-0.64□□□□□ -2.51
UBE2B-203ENST00000503080 LAMA5O15230 3695 aa-0.65□□□□□ -2.51
UBE2B-203ENST00000503080 CSPG4Q6UVK1 2322 aa-0.65□□□□□ -2.51
UBE2B-203ENST00000503080 I3L2K1 104 aa-0.65□□□□□ -2.51
UBE2B-203ENST00000503080 Q8N8P6 123 aa-0.65□□□□□ -2.51
UBE2B-203ENST00000503080 MYOM3Q5VTT5 1437 aa-0.65□□□□□ -2.51
UBE2B-203ENST00000503080 SETXQ7Z333 2677 aaKnown RBP-0.66□□□□□ -2.51
UBE2B-203ENST00000503080 LAMC1P11047 1609 aa-0.66□□□□□ -2.51
UBE2B-203ENST00000503080 TRBV6-1A0A0K0K1D8 114 aa-0.66□□□□□ -2.52
UBE2B-203ENST00000503080 COX17Q14061 63 aa-0.66□□□□□ -2.52
UBE2B-203ENST00000503080 C12orf73Q69YU5 71 aa-0.66□□□□□ -2.52
UBE2B-203ENST00000503080 Q6JHZ5 121 aa-0.66□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms