RNA–Protein interactions for RNA: ENST00000498804.1

TRBVA-201, Transcript of T cell receptor beta variable A (pseudogene), humanhuman

BASIC

Gene TRBVA, Length 316 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVA-201ENST00000498804 TARBP1Q13395 1621 aaKnown RBP0.38□□□□□ -2.35
TRBVA-201ENST00000498804 ABCC3O15438 1527 aa0.38□□□□□ -2.35
TRBVA-201ENST00000498804 MAPKBP1O60336 1514 aa0.38□□□□□ -2.35
TRBVA-201ENST00000498804 NEXMIFQ5QGS0 1516 aa0.38□□□□□ -2.35
TRBVA-201ENST00000498804 ZMYM4Q5VZL5 1548 aa0.38□□□□□ -2.35
TRBVA-201ENST00000498804 ARHGEF12Q9NZN5 1544 aa0.38□□□□□ -2.35
TRBVA-201ENST00000498804 ABCA4P78363 2273 aa0.38□□□□□ -2.35
TRBVA-201ENST00000498804 ADGRB2O60241 1585 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 PXDNQ92626 1479 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 IFT140Q96RY7 1462 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 KTN1Q86UP2 1357 aaKnown RBP0.37□□□□□ -2.35
TRBVA-201ENST00000498804 MAP2P11137 1827 aaKnown RBP0.37□□□□□ -2.35
TRBVA-201ENST00000498804 TRGV2A0A075B6R0 118 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 IGLV3-32A0A0A0MS00 114 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 A0A0G2JND7 137 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 TRBV7-7A0A0K0K1E9 115 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 TRBV6-4A0A1B0GX49 114 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 TCRBV3S1A0A5B6 114 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 C17orf112F2Z3M2 114 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 HCRTO43612 131 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 ERC2-IT1O76042 136 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 APOC3P02656 99 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 RPL37AP61513 92 aaKnown RBP0.37□□□□□ -2.35
TRBVA-201ENST00000498804 FXYD3Q14802 87 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 ASB16-AS1Q495Z4 193 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 XAF1Q6GPH4 301 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 LINC00322Q6ZN03 302 aaPredicted RBP0.37□□□□□ -2.35
TRBVA-201ENST00000498804 COMMD6Q7Z4G1 85 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 C20orf197Q8N268 126 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 SVBPQ8N300 66 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 TMEM141Q96I45 108 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 LINC00208Q96KT6 92 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 MCEEQ96PE7 176 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 SMIM7Q9BQ49 75 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 SPANXDQ9BXN6 97 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 ATG5Q9H1Y0 275 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 NDUFA4L2Q9NRX3 87 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 CACFD1Q9UGQ2 172 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 KNDC1Q76NI1 1749 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 SLIT1O75093 1534 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 EHBP1L1Q8N3D4 1523 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 SYNE2Q8WXH0 6885 aaKnown RBP0.37□□□□□ -2.35
TRBVA-201ENST00000498804 CLIP1P30622 1438 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 NSD3Q9BZ95 1437 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 RGPD2P0DJD1 1756 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 FREM3P0C091 2139 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 MYO7BQ6PIF6 2116 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 CLTCQ00610 1675 aaKnown RBP0.37□□□□□ -2.35
TRBVA-201ENST00000498804 KIF21AQ7Z4S6 1674 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 ITSN2Q9NZM3 1697 aa0.37□□□□□ -2.35
TRBVA-201ENST00000498804 DIP2CQ9Y2E4 1556 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 MLH3Q9UHC1 1453 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 MROH1Q8NDA8 1641 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 USP32Q8NFA0 1604 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 MAP3K4Q9Y6R4 1608 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 PDCD11Q14690 1871 aaKnown RBP0.36□□□□□ -2.35
TRBVA-201ENST00000498804 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.36□□□□□ -2.35
TRBVA-201ENST00000498804 TRBV6-7A0A0A0MS04 114 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 TRAV13-2A0A0B4J235 113 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 UBE2L5PA0A1B0GUS4 154 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 IGLC7A0M8Q6 106 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 FAM223BA6NKX1 122 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 SNCGO76070 127 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 SFT2D2O95562 160 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 LY6G6CO95867 125 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 DNAL4O96015 105 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 IGHV3-33P01772 117 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 PDE6GP18545 87 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 UBE2D3P61077 147 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 GNG11P61952 73 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 UBE2D2P62837 147 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 SEC11AP67812 179 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 UBE2L3P68036 154 aaKnown RBP0.36□□□□□ -2.35
TRBVA-201ENST00000498804 WFDC2Q14508 124 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 ETDBQ3ZM63 59 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 ZNF720Q7Z2F6 126 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 Q86TA4 180 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 Q8N6K4 173 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 C5orf56Q8N8D9 126 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 TMEM254Q8TBM7 123 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 MYOZ3Q8TDC0 251 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 LINC00467Q9BRT7 94 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 DPY30Q9C005 99 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 WFDC10AQ9H1F0 79 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 LINC00472Q9H8W2 130 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 CDC42SE2Q9NRR3 84 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 SPANXCQ9NY87 97 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 MRPL36Q9P0J6 103 aaKnown RBP0.36□□□□□ -2.35
TRBVA-201ENST00000498804 SCP2D1Q9UJQ7 156 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 MAGI3Q5TCQ9 1506 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 NAIPQ13075 1403 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 RRBP1Q9P2E9 1410 aaKnown RBP0.36□□□□□ -2.35
TRBVA-201ENST00000498804 WIZO95785 1651 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 FREM1Q5H8C1 2179 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 DOCK11Q5JSL3 2073 aa0.36□□□□□ -2.35
TRBVA-201ENST00000498804 SPTBP11277 2137 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 FSIP2Q5CZC0 6907 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 KMT2DO14686 5537 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 LRP6O75581 1613 aa0.35□□□□□ -2.35
TRBVA-201ENST00000498804 PAPPAQ13219 1627 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms