RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801		A0A0J9YY99	117 aa		5.12	□□□□□ -1.59
GARNL3-222	ENST00000498801	TRBV6-4	A0A1B0GX49	114 aa		5.12	□□□□□ -1.59
GARNL3-222	ENST00000498801		A0A1B0GXF2	115 aa		5.12	□□□□□ -1.59
GARNL3-222	ENST00000498801	IGLL5	B9A064	214 aa		5.12	□□□□□ -1.59
GARNL3-222	ENST00000498801	S100A8	P05109	93 aa		5.12	□□□□□ -1.59
GARNL3-222	ENST00000498801	MGP	P08493	103 aa		5.12	□□□□□ -1.59
GARNL3-222	ENST00000498801	LINC00315	P59091	139 aa		5.12	□□□□□ -1.59
GARNL3-222	ENST00000498801	RAB4B	P61018	213 aa		5.12	□□□□□ -1.59
GARNL3-222	ENST00000498801	HBB	P68871	147 aa		5.12	□□□□□ -1.59
GARNL3-222	ENST00000498801	ZNF56	Q15929	161 aa		5.12	□□□□□ -1.59
GARNL3-222	ENST00000498801	SLC25A29	Q8N8R3	303 aa		5.12	□□□□□ -1.59
GARNL3-222	ENST00000498801	VSIG2	Q96IQ7	327 aa		5.12	□□□□□ -1.59
GARNL3-222	ENST00000498801	BTF3L4	Q96K17	158 aa		5.12	□□□□□ -1.59
GARNL3-222	ENST00000498801	TMEM191A	Q9H0A3	160 aa		5.12	□□□□□ -1.59
GARNL3-222	ENST00000498801	APLN	Q9ULZ1	77 aa		5.12	□□□□□ -1.59
GARNL3-222	ENST00000498801	URGCP-MRPS24	S4R325	110 aa		5.12	□□□□□ -1.59
GARNL3-222	ENST00000498801		K7EQD1	137 aa		5.11	□□□□□ -1.59
GARNL3-222	ENST00000498801	RHOH	Q15669	191 aa		5.11	□□□□□ -1.59
GARNL3-222	ENST00000498801	LGALS9C	Q6DKI2	356 aa		5.11	□□□□□ -1.59
GARNL3-222	ENST00000498801	C15orf53	Q8NAA6	179 aa		5.11	□□□□□ -1.59
GARNL3-222	ENST00000498801	PRADC1	Q9BSG0	188 aa		5.11	□□□□□ -1.59
GARNL3-222	ENST00000498801	LYST	Q99698	3801 aa		5.11	□□□□□ -1.59
GARNL3-222	ENST00000498801	SMIM1	B2RUZ4	78 aa		5.1	□□□□□ -1.59
GARNL3-222	ENST00000498801	ATP6V1G1	O75348	118 aa		5.1	□□□□□ -1.59
GARNL3-222	ENST00000498801	PRSS1	P07477	247 aa		5.1	□□□□□ -1.59
GARNL3-222	ENST00000498801	LINC01547	P58512	204 aa	Predicted RBP	5.1	□□□□□ -1.59
GARNL3-222	ENST00000498801	ELOB	Q15370	118 aa		5.1	□□□□□ -1.59
GARNL3-222	ENST00000498801	RASL11A	Q6T310	242 aa		5.1	□□□□□ -1.59
GARNL3-222	ENST00000498801	CBLN2	Q8IUK8	224 aa		5.1	□□□□□ -1.59
GARNL3-222	ENST00000498801	AMN1	Q8IY45	258 aa		5.1	□□□□□ -1.59
GARNL3-222	ENST00000498801	GATD1	Q8NB37	220 aa		5.1	□□□□□ -1.59
GARNL3-222	ENST00000498801	SMCO4	Q9NRQ5	59 aa		5.1	□□□□□ -1.59
GARNL3-222	ENST00000498801	ICOS	Q9Y6W8	199 aa		5.1	□□□□□ -1.59
GARNL3-222	ENST00000498801		A0A096LPF7	62 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801	TGIF2-C20orf24	A0A0A6YYL0	155 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801	TRAV26-2	A0A0B4J265	109 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801	TRBV10-1	A0A0K0K1A3	114 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801	LOC100131303	A0A0U1RQF7	123 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801		H7C1H1	209 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801		M0QY20	66 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801		P0DMU3	169 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801	FAM231A	P0DMU4	169 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801	FAM231C	P0DMU5	169 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801	RAB4A	P20338	218 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801	S100A1	P23297	94 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801	LCE1A	Q5T7P2	110 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801	FAM104B	Q5XKR9	115 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801	FRZB	Q92765	325 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801	MRAP2	Q96G30	205 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801	RNF185	Q96GF1	192 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801	YPEL4	Q96NS1	127 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801		Q9UF83	564 aa		5.09	□□□□□ -1.59
GARNL3-222	ENST00000498801	TRBV24-1	A0A075B6N3	115 aa		5.08	□□□□□ -1.6
GARNL3-222	ENST00000498801	SRI	P30626	198 aa		5.08	□□□□□ -1.6
GARNL3-222	ENST00000498801	MRPL23	Q16540	153 aa	Known RBP	5.08	□□□□□ -1.6
GARNL3-222	ENST00000498801	KIAA1644	Q3SXP7	199 aa		5.08	□□□□□ -1.6
GARNL3-222	ENST00000498801	COX19	Q49B96	90 aa		5.08	□□□□□ -1.6
GARNL3-222	ENST00000498801	TMEM136	Q6ZRR5	245 aa		5.08	□□□□□ -1.6
GARNL3-222	ENST00000498801	TRBV7-3	A0A075B6L6	115 aa		5.07	□□□□□ -1.6
GARNL3-222	ENST00000498801	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.07	□□□□□ -1.6
GARNL3-222	ENST00000498801	SMKR1	H3BMG3	65 aa		5.07	□□□□□ -1.6
GARNL3-222	ENST00000498801	NCR2	O95944	276 aa		5.07	□□□□□ -1.6
GARNL3-222	ENST00000498801	HLA-DQA1	P01909	254 aa		5.07	□□□□□ -1.6
GARNL3-222	ENST00000498801	LINC00694	P0DN24	101 aa		5.07	□□□□□ -1.6
GARNL3-222	ENST00000498801	MRPL51	Q4U2R6	128 aa	Known RBP	5.07	□□□□□ -1.6
GARNL3-222	ENST00000498801	SH2D6	Q7Z4S9	175 aa		5.07	□□□□□ -1.6
GARNL3-222	ENST00000498801	ZNRF2	Q8NHG8	242 aa		5.07	□□□□□ -1.6
GARNL3-222	ENST00000498801	DNAJC30	Q96LL9	226 aa		5.07	□□□□□ -1.6
GARNL3-222	ENST00000498801	GNB1L	Q9BYB4	327 aa		5.07	□□□□□ -1.6
GARNL3-222	ENST00000498801	NIT2	Q9NQR4	276 aa		5.07	□□□□□ -1.6
GARNL3-222	ENST00000498801	IFITM10	A6NMD0	228 aa		5.06	□□□□□ -1.6
GARNL3-222	ENST00000498801		D6R8Y8	96 aa		5.06	□□□□□ -1.6
GARNL3-222	ENST00000498801	SCO1	O75880	301 aa		5.06	□□□□□ -1.6
GARNL3-222	ENST00000498801	GAS8-AS1	O95177	125 aa		5.06	□□□□□ -1.6
GARNL3-222	ENST00000498801	PPBP	P02775	128 aa		5.06	□□□□□ -1.6
GARNL3-222	ENST00000498801	MT-ND6	P03923	174 aa		5.06	□□□□□ -1.6
GARNL3-222	ENST00000498801	CKS2	P33552	79 aa		5.06	□□□□□ -1.6
GARNL3-222	ENST00000498801	RPS10	P46783	165 aa	Known RBP	5.06	□□□□□ -1.6
GARNL3-222	ENST00000498801	UBE2D3	P61077	147 aa		5.06	□□□□□ -1.6
GARNL3-222	ENST00000498801	UBE2D2	P62837	147 aa		5.06	□□□□□ -1.6
GARNL3-222	ENST00000498801	OR10J3	Q5JRS4	329 aa		5.06	□□□□□ -1.6
GARNL3-222	ENST00000498801	NEGR1	Q7Z3B1	354 aa		5.06	□□□□□ -1.6
GARNL3-222	ENST00000498801	ATP6V0E2	Q8NHE4	81 aa		5.06	□□□□□ -1.6
GARNL3-222	ENST00000498801	RPL39L	Q96EH5	51 aa	Known RBP	5.06	□□□□□ -1.6
GARNL3-222	ENST00000498801	UPK3B	Q9BT76	320 aa		5.06	□□□□□ -1.6
GARNL3-222	ENST00000498801	DYNC2H1	Q8NCM8	4307 aa	Known RBP	5.06	□□□□□ -1.6
GARNL3-222	ENST00000498801	TRBV6-5	A0A0K0K1A5	114 aa		5.05	□□□□□ -1.6
GARNL3-222	ENST00000498801	CDK2AP2	O75956	126 aa		5.05	□□□□□ -1.6
GARNL3-222	ENST00000498801	PPP1R17	O96001	155 aa		5.05	□□□□□ -1.6
GARNL3-222	ENST00000498801	APCS	P02743	223 aa		5.05	□□□□□ -1.6
GARNL3-222	ENST00000498801	CCL18	P55774	89 aa		5.05	□□□□□ -1.6
GARNL3-222	ENST00000498801	ESRG	Q1W209	222 aa		5.05	□□□□□ -1.6
GARNL3-222	ENST00000498801	LYPD5	Q6UWN5	251 aa		5.05	□□□□□ -1.6
GARNL3-222	ENST00000498801	DAZ4	Q86SG3	579 aa	Known RBP	5.05	□□□□□ -1.6
GARNL3-222	ENST00000498801	ORMDL3	Q8N138	153 aa		5.05	□□□□□ -1.6
GARNL3-222	ENST00000498801	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	5.05	□□□□□ -1.6
GARNL3-222	ENST00000498801	DAZ3	Q9NR90	486 aa	Known RBP	5.05	□□□□□ -1.6
GARNL3-222	ENST00000498801	IGHV3-38	A0A0C4DH36	116 aa		5.04	□□□□□ -1.6
GARNL3-222	ENST00000498801	SDHAF1	A6NFY7	115 aa		5.04	□□□□□ -1.6
GARNL3-222	ENST00000498801	COLCA2	A8K830	154 aa		5.04	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms