RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 CEND1Q8N111 149 aa3.23□□□□□ -1.89
SSR3-209ENST00000498205 OR10J6PQ8NGY7 276 aa3.23□□□□□ -1.89
SSR3-209ENST00000498205 ATP6V0E2Q8NHE4 81 aa3.23□□□□□ -1.89
SSR3-209ENST00000498205 Q8TAT8 98 aa3.23□□□□□ -1.89
SSR3-209ENST00000498205 TMEM158Q8WZ71 300 aa3.23□□□□□ -1.89
SSR3-209ENST00000498205 PTH2Q96A98 100 aa3.23□□□□□ -1.89
SSR3-209ENST00000498205 C16orf74Q96GX8 76 aa3.23□□□□□ -1.89
SSR3-209ENST00000498205 TMEM141Q96I45 108 aa3.23□□□□□ -1.89
SSR3-209ENST00000498205 LINC01600Q96MT4 127 aa3.23□□□□□ -1.89
SSR3-209ENST00000498205 CHAC1Q9BUX1 264 aa3.23□□□□□ -1.89
SSR3-209ENST00000498205 TPPP3Q9BW30 176 aa3.23□□□□□ -1.89
SSR3-209ENST00000498205 VCX2Q9H322 139 aa3.23□□□□□ -1.89
SSR3-209ENST00000498205 DAZ1Q9NQZ3 744 aaKnown RBP3.23□□□□□ -1.89
SSR3-209ENST00000498205 ASPMQ8IZT6 3477 aa3.23□□□□□ -1.89
SSR3-209ENST00000498205 TRBV7-3A0A075B6L6 115 aa3.22□□□□□ -1.89
SSR3-209ENST00000498205 TRAV2A0A0B4J234 112 aa3.22□□□□□ -1.89
SSR3-209ENST00000498205 A0A0J9YX75 114 aa3.22□□□□□ -1.89
SSR3-209ENST00000498205 TRBV27A0A0K0K1C4 114 aa3.22□□□□□ -1.89
SSR3-209ENST00000498205 OR11H12B2RN74 326 aa3.22□□□□□ -1.89
SSR3-209ENST00000498205 IGHV1-69P01742 117 aa3.22□□□□□ -1.89
SSR3-209ENST00000498205 IGHV3-23P01764 117 aa3.22□□□□□ -1.89
SSR3-209ENST00000498205 POLR2KP53803 58 aaKnown RBP3.22□□□□□ -1.89
SSR3-209ENST00000498205 ERCC8Q13216 396 aa3.22□□□□□ -1.89
SSR3-209ENST00000498205 RHOHQ15669 191 aa3.22□□□□□ -1.89
SSR3-209ENST00000498205 SPANXN1Q5VSR9 72 aa3.22□□□□□ -1.89
SSR3-209ENST00000498205 PCP2Q8IVA1 136 aa3.22□□□□□ -1.89
SSR3-209ENST00000498205 OR11H1Q8NG94 326 aa3.22□□□□□ -1.89
SSR3-209ENST00000498205 OR11H2Q8NH07 326 aa3.22□□□□□ -1.89
SSR3-209ENST00000498205 SPANXB1Q9NS25 103 aaPredicted RBP3.22□□□□□ -1.89
SSR3-209ENST00000498205 MRPL35Q9NZE8 188 aaKnown RBP3.22□□□□□ -1.89
SSR3-209ENST00000498205 SH3BGRL2Q9UJC5 107 aa3.22□□□□□ -1.89
SSR3-209ENST00000498205 SPCS1Q9Y6A9 102 aa3.22□□□□□ -1.89
SSR3-209ENST00000498205 USP9XQ93008 2570 aaPredicted RBP3.22□□□□□ -1.89
SSR3-209ENST00000498205 ATMQ13315 3056 aa3.22□□□□□ -1.89
SSR3-209ENST00000498205 DMXL2Q8TDJ6 3036 aa3.22□□□□□ -1.89
SSR3-209ENST00000498205 LRRK2Q5S007 2527 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 TRBV20-1A0A075B6N2 111 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 TMSB15BA0A087X1C1 80 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 IGKV2D-26A0A0A0MRZ7 120 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 MYMXA0A1B0GTQ4 84 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 LOC389332A0A1B0GUA5 103 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 A6NDX4 124 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 C11orf86A6NJI1 115 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 A8MTW9 85 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 H3BUT2 72 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 J3QLI3 93 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 LGALS9O00182 355 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 RTL8CO15255 209 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 COX6B1P14854 86 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 NMUP48645 174 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 UBE2D1P51668 147 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 DLX1P56177 255 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 LINC00315P59091 139 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 HERVK_113P61574 105 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 RRN3P1Q2M238 152 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 NSUN5P1Q3KNT7 163 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 CLEC19AQ6UXS0 136 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 FOXC2Q99958 501 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 VPS25Q9BRG1 176 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 PPDPFQ9H3Y8 114 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 CYSLTR1Q9Y271 337 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 CHTOPQ9Y3Y2 248 aaKnown RBP3.21□□□□□ -1.9
SSR3-209ENST00000498205 PHLDA3Q9Y5J5 127 aa3.21□□□□□ -1.9
SSR3-209ENST00000498205 PTPN13Q12923 2485 aa3.2□□□□□ -1.9
SSR3-209ENST00000498205 SMG1Q96Q15 3661 aaKnown RBP3.2□□□□□ -1.9
SSR3-209ENST00000498205 TRAV40A0A0B4J280 105 aa3.2□□□□□ -1.9
SSR3-209ENST00000498205 A0A0U1RRA0 63 aa3.2□□□□□ -1.9
SSR3-209ENST00000498205 IGIPA6NJ69 53 aa3.2□□□□□ -1.9
SSR3-209ENST00000498205 IGLL5B9A064 214 aa3.2□□□□□ -1.9
SSR3-209ENST00000498205 SMKR1H3BMG3 65 aa3.2□□□□□ -1.9
SSR3-209ENST00000498205 TRGV3P03979 118 aa3.2□□□□□ -1.9
SSR3-209ENST00000498205 CD7P09564 240 aa3.2□□□□□ -1.9
SSR3-209ENST00000498205 RNASE3P12724 160 aaKnown RBP3.2□□□□□ -1.9
SSR3-209ENST00000498205 FXYD2P54710 66 aa3.2□□□□□ -1.9
SSR3-209ENST00000498205 C10orf105Q8TEF2 133 aa3.2□□□□□ -1.9
SSR3-209ENST00000498205 DCANP1Q8TF63 244 aa3.2□□□□□ -1.9
SSR3-209ENST00000498205 SCGB3A1Q96QR1 104 aa3.2□□□□□ -1.9
SSR3-209ENST00000498205 LINC00467Q9BRT7 94 aa3.2□□□□□ -1.9
SSR3-209ENST00000498205 BPESC1Q9GZL8 116 aa3.2□□□□□ -1.9
SSR3-209ENST00000498205 UFC1Q9Y3C8 167 aa3.2□□□□□ -1.9
SSR3-209ENST00000498205 TACC2O95359 2948 aa3.2□□□□□ -1.9
SSR3-209ENST00000498205 FLNBO75369 2602 aaKnown RBP3.2□□□□□ -1.9
SSR3-209ENST00000498205 CFAP46Q8IYW2 2715 aa3.2□□□□□ -1.9
SSR3-209ENST00000498205 NAV2Q8IVL1 2488 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 SDHAF1A6NFY7 115 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 B4DSR2 109 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 G3V318 75 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 H0Y8G0 127 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 H3BMG7 143 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 H3BVH4 76 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 S100A4P26447 101 aaKnown RBP3.19□□□□□ -1.9
SSR3-209ENST00000498205 PSMB8P28062 276 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 HLA-DMBP28068 263 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 RNASE4P34096 147 aaKnown RBP3.19□□□□□ -1.9
SSR3-209ENST00000498205 UBE2D3P61077 147 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 UBE2D2P62837 147 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 PMVKQ15126 192 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 C12orf74Q32Q52 190 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 SBSPONQ8IVN8 264 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 RNF182Q8N6D2 247 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 187.4 ms