RNA–Protein interactions for RNA: ENST00000495265.5

BRD9-212, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 2,843 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-212ENST00000495265 SORL1Q92673 2214 aa12.97□□□□□ -0.33
BRD9-212ENST00000495265 IGHV4-38-2P0DP08 117 aa12.97□□□□□ -0.33
BRD9-212ENST00000495265 HERV-K104P63124 156 aa12.97□□□□□ -0.33
BRD9-212ENST00000495265 MEIG1Q5JSS6 88 aa12.97□□□□□ -0.33
BRD9-212ENST00000495265 TRGV11A0A075B6L2 103 aa12.96□□□□□ -0.34
BRD9-212ENST00000495265 IGLV1-40P01703 118 aa12.96□□□□□ -0.34
BRD9-212ENST00000495265 HTN1P15515 57 aa12.96□□□□□ -0.34
BRD9-212ENST00000495265 SHISA2Q6UWI4 295 aa12.96□□□□□ -0.34
BRD9-212ENST00000495265 C3orf56Q8N813 242 aa12.96□□□□□ -0.34
BRD9-212ENST00000495265 K7EMT4 169 aa12.95□□□□□ -0.34
BRD9-212ENST00000495265 MRPL23Q16540 153 aaKnown RBP12.95□□□□□ -0.34
BRD9-212ENST00000495265 FAM110AQ9BQ89 295 aa12.95□□□□□ -0.34
BRD9-212ENST00000495265 TMEM95Q3KNT9 176 aa12.95□□□□□ -0.34
BRD9-212ENST00000495265 DEFB121Q5J5C9 76 aa12.95□□□□□ -0.34
BRD9-212ENST00000495265 DOPEY2Q9Y3R5 2298 aa12.94□□□□□ -0.34
BRD9-212ENST00000495265 COL12A1Q99715 3063 aa12.94□□□□□ -0.34
BRD9-212ENST00000495265 FAM240AA0A1B0GVK7 77 aa12.94□□□□□ -0.34
BRD9-212ENST00000495265 A6NDX4 124 aa12.94□□□□□ -0.34
BRD9-212ENST00000495265 KNCNA6PVL3 124 aa12.94□□□□□ -0.34
BRD9-212ENST00000495265 SNRPD3P62318 126 aaKnown RBP12.93□□□□□ -0.34
BRD9-212ENST00000495265 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.93□□□□□ -0.34
BRD9-212ENST00000495265 TINCRA0A1B0GVN0 87 aa12.93□□□□□ -0.34
BRD9-212ENST00000495265 IGKV2-29A2NJV5 120 aaPredicted RBP12.93□□□□□ -0.34
BRD9-212ENST00000495265 VPS13CQ709C8 3753 aa12.92□□□□□ -0.34
BRD9-212ENST00000495265 PRM2P04554 102 aa12.92□□□□□ -0.34
BRD9-212ENST00000495265 RBMY1A1P0DJD3 496 aaKnown RBP12.92□□□□□ -0.34
BRD9-212ENST00000495265 RBMY1CP0DJD4 496 aa12.92□□□□□ -0.34
BRD9-212ENST00000495265 RBMY1FQ15415 496 aaKnown RBP12.92□□□□□ -0.34
BRD9-212ENST00000495265 TNFRSF18Q9Y5U5 241 aa12.92□□□□□ -0.34
BRD9-212ENST00000495265 CITED2Q99967 270 aaPredicted RBP12.91□□□□□ -0.34
BRD9-212ENST00000495265 K7EQG2 157 aa12.91□□□□□ -0.34
BRD9-212ENST00000495265 C10orf99Q6UWK7 81 aa12.91□□□□□ -0.34
BRD9-212ENST00000495265 CHCHD7Q9BUK0 85 aa12.91□□□□□ -0.34
BRD9-212ENST00000495265 YAE1D1Q9NRH1 226 aa12.91□□□□□ -0.34
BRD9-212ENST00000495265 UBE2D4Q9Y2X8 147 aa12.91□□□□□ -0.34
BRD9-212ENST00000495265 TRBV7-7A0A0K0K1E9 115 aa12.9□□□□□ -0.34
BRD9-212ENST00000495265 DUX5Q96PT3 197 aa12.9□□□□□ -0.34
BRD9-212ENST00000495265 CFHR3Q02985 330 aa12.9□□□□□ -0.34
BRD9-212ENST00000495265 Q6ZSN1 163 aa12.9□□□□□ -0.34
BRD9-212ENST00000495265 CDKN2A-AS1Q9UH64 79 aa12.89□□□□□ -0.35
BRD9-212ENST00000495265 IGHV3-38A0A0C4DH36 116 aa12.88□□□□□ -0.35
BRD9-212ENST00000495265 LINC00467Q9BRT7 94 aa12.88□□□□□ -0.35
BRD9-212ENST00000495265 IGHV4-61A0A0C4DH41 118 aa12.88□□□□□ -0.35
BRD9-212ENST00000495265 A0A0U1RRA0 63 aa12.88□□□□□ -0.35
BRD9-212ENST00000495265 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.87□□□□□ -0.35
BRD9-212ENST00000495265 FAM236AA0A1B0GUQ0 79 aa12.87□□□□□ -0.35
BRD9-212ENST00000495265 FAM236BA0A1B0GV22 79 aa12.87□□□□□ -0.35
BRD9-212ENST00000495265 ZNF625Q96I27 306 aaPredicted RBP12.87□□□□□ -0.35
BRD9-212ENST00000495265 TMEM101Q96IK0 257 aa12.87□□□□□ -0.35
BRD9-212ENST00000495265 LINC01587Q99440 93 aa12.87□□□□□ -0.35
BRD9-212ENST00000495265 SPANXA1Q9NS26 97 aa12.87□□□□□ -0.35
BRD9-212ENST00000495265 TIMM17BO60830 172 aa12.86□□□□□ -0.35
BRD9-212ENST00000495265 HIVEP3Q5T1R4 2406 aa12.86□□□□□ -0.35
BRD9-212ENST00000495265 SMCR5Q8TEV8 140 aa12.86□□□□□ -0.35
BRD9-212ENST00000495265 EDA2RQ9HAV5 297 aa12.86□□□□□ -0.35
BRD9-212ENST00000495265 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.86□□□□□ -0.354e-7■■■□□ 18.7
BRD9-212ENST00000495265 NACAE9PAV3 2078 aa12.85□□□□□ -0.35
BRD9-212ENST00000495265 KLRB1Q12918 225 aa12.85□□□□□ -0.35
BRD9-212ENST00000495265 SPTBN4Q9H254 2564 aa12.85□□□□□ -0.35
BRD9-212ENST00000495265 SYNJ2BPP57105 145 aa12.85□□□□□ -0.35
BRD9-212ENST00000495265 NDUFA1O15239 70 aa12.84□□□□□ -0.35
BRD9-212ENST00000495265 LINC00308Q8TCZ7 52 aa12.84□□□□□ -0.35
BRD9-212ENST00000495265 PSMB8P28062 276 aa12.84□□□□□ -0.35
BRD9-212ENST00000495265 IGF2RP11717 2491 aa12.84□□□□□ -0.35
BRD9-212ENST00000495265 COX6A2Q02221 97 aa12.84□□□□□ -0.35
BRD9-212ENST00000495265 Q8N2B8 174 aa12.84□□□□□ -0.35
BRD9-212ENST00000495265 Q9H8V8 135 aa12.83□□□□□ -0.36
BRD9-212ENST00000495265 COX7A2LO14548 114 aa12.82□□□□□ -0.36
BRD9-212ENST00000495265 CIRBPQ14011 172 aaKnown RBP12.81□□□□□ -0.36
BRD9-212ENST00000495265 SOSTDC1Q6X4U4 206 aa12.81□□□□□ -0.36
BRD9-212ENST00000495265 CRYBG3Q68DQ2 2970 aa12.81□□□□□ -0.36
BRD9-212ENST00000495265 PRORYQ9H606 182 aa12.8□□□□□ -0.36
BRD9-212ENST00000495265 C19orf84I3L1E1 186 aa12.8□□□□□ -0.36
BRD9-212ENST00000495265 ACYP1P07311 99 aa12.8□□□□□ -0.36
BRD9-212ENST00000495265 MAP1AP78559 2803 aaPredicted RBP12.8□□□□□ -0.36
BRD9-212ENST00000495265 DAZ2Q13117 558 aaKnown RBP12.8□□□□□ -0.36
BRD9-212ENST00000495265 DAZ4Q86SG3 579 aaKnown RBP12.8□□□□□ -0.36
BRD9-212ENST00000495265 DAZ3Q9NR90 486 aaKnown RBP12.8□□□□□ -0.36
BRD9-212ENST00000495265 IGLV5-45A0A087WSX0 123 aa12.79□□□□□ -0.36
BRD9-212ENST00000495265 CFAP161Q6P656 301 aa12.79□□□□□ -0.36
BRD9-212ENST00000495265 TIRAPP58753 221 aa12.79□□□□□ -0.36
BRD9-212ENST00000495265 RNF152Q8N8N0 203 aa12.79□□□□□ -0.36
BRD9-212ENST00000495265 IMUPQ9GZP8 106 aa12.78□□□□□ -0.36
BRD9-212ENST00000495265 TMEM126AQ9H061 195 aa12.78□□□□□ -0.36
BRD9-212ENST00000495265 IGHV3OR16-12A0A075B7B8 117 aa12.78□□□□□ -0.36
BRD9-212ENST00000495265 AVPP01185 164 aa12.78□□□□□ -0.36
BRD9-212ENST00000495265 CREBBPQ92793 2442 aa12.77□□□□□ -0.36
BRD9-212ENST00000495265 RBMY1BA6NDE4 496 aaKnown RBP12.77□□□□□ -0.36
BRD9-212ENST00000495265 RBMY1EA6NEQ0 496 aaKnown RBP12.77□□□□□ -0.36
BRD9-212ENST00000495265 RBMY1DP0C7P1 496 aaKnown RBP12.77□□□□□ -0.36
BRD9-212ENST00000495265 DGAT2L7PQ6IED9 249 aa12.77□□□□□ -0.36
BRD9-212ENST00000495265 CSPG4Q6UVK1 2322 aa12.77□□□□□ -0.36
BRD9-212ENST00000495265 NDUFA7O95182 113 aa12.77□□□□□ -0.37
BRD9-212ENST00000495265 DEFB131AP59861 70 aa12.77□□□□□ -0.37
BRD9-212ENST00000495265 PIMREGQ9BSJ6 248 aa12.77□□□□□ -0.37
BRD9-212ENST00000495265 BAALC-AS2P0C853 105 aa12.76□□□□□ -0.37
BRD9-212ENST00000495265 BEAN1Q3B7T3 259 aa12.76□□□□□ -0.37
BRD9-212ENST00000495265 LINC00643Q86TS7 51 aa12.76□□□□□ -0.37
BRD9-212ENST00000495265 FAM218AQ96MZ4 157 aa12.76□□□□□ -0.37
BRD9-212ENST00000495265 C22orf24Q9Y442 160 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms