RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 GAGE12HA6NDE8 117 aa8.49□□□□□ -1.05
RFC4-214ENST00000494047 FSHBP01225 129 aa8.49□□□□□ -1.05
RFC4-214ENST00000494047 P0DMU3 169 aa8.49□□□□□ -1.05
RFC4-214ENST00000494047 FAM231AP0DMU4 169 aa8.49□□□□□ -1.05
RFC4-214ENST00000494047 FAM231CP0DMU5 169 aa8.49□□□□□ -1.05
RFC4-214ENST00000494047 Q6YL49 198 aa8.49□□□□□ -1.05
RFC4-214ENST00000494047 Q8N2B8 174 aa8.49□□□□□ -1.05
RFC4-214ENST00000494047 RAX2Q96IS3 184 aa8.49□□□□□ -1.05
RFC4-214ENST00000494047 PRO0461Q9UI25 63 aa8.49□□□□□ -1.05
RFC4-214ENST00000494047 MUC4Q99102 2169 aa8.49□□□□□ -1.05
RFC4-214ENST00000494047 TRAV25A0A0B4J276 109 aa8.48□□□□□ -1.05
RFC4-214ENST00000494047 TSPAN13O95857 204 aa8.48□□□□□ -1.05
RFC4-214ENST00000494047 IGHV4-59P01825 116 aa8.48□□□□□ -1.05
RFC4-214ENST00000494047 HOXD3P31249 432 aaPredicted RBP8.48□□□□□ -1.05
RFC4-214ENST00000494047 CMC4P56277 68 aaPredicted RBP8.48□□□□□ -1.05
RFC4-214ENST00000494047 MRPS36P82909 103 aaKnown RBP8.48□□□□□ -1.05
RFC4-214ENST00000494047 AMTNQ6UX39 209 aa8.48□□□□□ -1.05
RFC4-214ENST00000494047 TEN1Q86WV5 123 aa8.48□□□□□ -1.05
RFC4-214ENST00000494047 PPDPFLQ8WWR9 84 aa8.48□□□□□ -1.05
RFC4-214ENST00000494047 TNFRSF18Q9Y5U5 241 aa8.48□□□□□ -1.05
RFC4-214ENST00000494047 A0A1B0GV72 72 aa8.48□□□□□ -1.05
RFC4-214ENST00000494047 TIMM17BO60830 172 aa8.48□□□□□ -1.05
RFC4-214ENST00000494047 SYNJ2BPP57105 145 aa8.48□□□□□ -1.05
RFC4-214ENST00000494047 C4orf3Q8WVX3 66 aa8.48□□□□□ -1.05
RFC4-214ENST00000494047 DUX5Q96PT3 197 aa8.48□□□□□ -1.05
RFC4-214ENST00000494047 AMELXQ99217 191 aa8.48□□□□□ -1.05
RFC4-214ENST00000494047 TIMM21Q9BVV7 248 aa8.48□□□□□ -1.05
RFC4-214ENST00000494047 IGLV4-3A0A075B6K6 122 aa8.47□□□□□ -1.05
RFC4-214ENST00000494047 LOC107984156A0A0G2JMH3 177 aa8.47□□□□□ -1.05
RFC4-214ENST00000494047 A0A0J9YXY3 114 aa8.47□□□□□ -1.05
RFC4-214ENST00000494047 TINCRA0A1B0GVN0 87 aa8.47□□□□□ -1.05
RFC4-214ENST00000494047 CIDEAO60543 219 aa8.47□□□□□ -1.05
RFC4-214ENST00000494047 INSP01308 110 aa8.47□□□□□ -1.05
RFC4-214ENST00000494047 IFITM1P13164 125 aa8.47□□□□□ -1.05
RFC4-214ENST00000494047 RPL39P62891 51 aaKnown RBP8.47□□□□□ -1.05
RFC4-214ENST00000494047 FOXI1Q12951 378 aa8.47□□□□□ -1.05
RFC4-214ENST00000494047 SPINK13Q1W4C9 94 aa8.47□□□□□ -1.05
RFC4-214ENST00000494047 ETDBQ3ZM63 59 aa8.47□□□□□ -1.05
RFC4-214ENST00000494047 TCTEX1D4Q5JR98 221 aa8.47□□□□□ -1.05
RFC4-214ENST00000494047 SBSPONQ8IVN8 264 aa8.47□□□□□ -1.05
RFC4-214ENST00000494047 ARL17AQ8IVW1 177 aa8.47□□□□□ -1.05
RFC4-214ENST00000494047 ZNRF2Q8NHG8 242 aa8.47□□□□□ -1.05
RFC4-214ENST00000494047 LINC01600Q96MT4 127 aa8.47□□□□□ -1.05
RFC4-214ENST00000494047 SPANXDQ9BXN6 97 aa8.47□□□□□ -1.05
RFC4-214ENST00000494047 SPANXCQ9NY87 97 aa8.47□□□□□ -1.05
RFC4-214ENST00000494047 COL6A5A8TX70 2615 aa8.46□□□□□ -1.06
RFC4-214ENST00000494047 COX6CP09669 75 aa8.46□□□□□ -1.06
RFC4-214ENST00000494047 CD28P10747 220 aa8.46□□□□□ -1.06
RFC4-214ENST00000494047 ZNF22P17026 224 aaPredicted RBP8.46□□□□□ -1.06
RFC4-214ENST00000494047 WFDC2Q14508 124 aa8.46□□□□□ -1.06
RFC4-214ENST00000494047 PPDPFQ9H3Y8 114 aa8.46□□□□□ -1.06
RFC4-214ENST00000494047 ZNF702PQ9H963 129 aa8.46□□□□□ -1.06
RFC4-214ENST00000494047 DEFB1P60022 68 aa8.45□□□□□ -1.06
RFC4-214ENST00000494047 ATXN8Q156A1 80 aa8.45□□□□□ -1.06
RFC4-214ENST00000494047 Q6ZS46 218 aa8.45□□□□□ -1.06
RFC4-214ENST00000494047 ERG28Q9UKR5 140 aa8.45□□□□□ -1.06
RFC4-214ENST00000494047 TSSC4Q9Y5U2 329 aaPredicted RBP8.45□□□□□ -1.06
RFC4-214ENST00000494047 SVEP1Q4LDE5 3571 aa8.45□□□□□ -1.06
RFC4-214ENST00000494047 IGHV1-58A0A0C4DH39 117 aa8.44□□□□□ -1.06
RFC4-214ENST00000494047 H3BMM0 161 aa8.44□□□□□ -1.06
RFC4-214ENST00000494047 CFC1BP0CG36 223 aa8.44□□□□□ -1.06
RFC4-214ENST00000494047 CFC1P0CG37 223 aa8.44□□□□□ -1.06
RFC4-214ENST00000494047 SCGB1C2P0DMR2 95 aa8.44□□□□□ -1.06
RFC4-214ENST00000494047 PSMB2P49721 201 aa8.44□□□□□ -1.06
RFC4-214ENST00000494047 BEAN1Q3B7T3 259 aa8.44□□□□□ -1.06
RFC4-214ENST00000494047 SPATA3Q8NHX4 192 aa8.44□□□□□ -1.06
RFC4-214ENST00000494047 DYNLRB2Q8TF09 96 aa8.44□□□□□ -1.06
RFC4-214ENST00000494047 DUX3Q96PT4 197 aa8.44□□□□□ -1.06
RFC4-214ENST00000494047 JPT2Q9H910 190 aa8.44□□□□□ -1.06
RFC4-214ENST00000494047 TRAV12-2A0A075B6T6 113 aa8.43□□□□□ -1.06
RFC4-214ENST00000494047 TRBV10-1A0A0K0K1A3 114 aa8.43□□□□□ -1.06
RFC4-214ENST00000494047 TRBV30A0A0K0K1B3 111 aa8.43□□□□□ -1.06
RFC4-214ENST00000494047 AVPP01185 164 aa8.43□□□□□ -1.06
RFC4-214ENST00000494047 IGHV3-53P01767 116 aa8.43□□□□□ -1.06
RFC4-214ENST00000494047 CIRBPQ14011 172 aaKnown RBP8.43□□□□□ -1.06
RFC4-214ENST00000494047 KLHL30-AS1Q8NEE0 82 aa8.43□□□□□ -1.06
RFC4-214ENST00000494047 ZNF418Q8TF45 676 aaPredicted RBP8.43□□□□□ -1.06
RFC4-214ENST00000494047 TIRAPP58753 221 aa8.42□□□□□ -1.06
RFC4-214ENST00000494047 TMEM95Q3KNT9 176 aa8.42□□□□□ -1.06
RFC4-214ENST00000494047 MXRA5Q9NR99 2828 aa8.42□□□□□ -1.06
RFC4-214ENST00000494047 IGHV3-33P01772 117 aa8.41□□□□□ -1.06
RFC4-214ENST00000494047 AZU1P20160 251 aa8.41□□□□□ -1.06
RFC4-214ENST00000494047 DEFB131AP59861 70 aa8.41□□□□□ -1.06
RFC4-214ENST00000494047 MDFIQ99750 246 aa8.41□□□□□ -1.06
RFC4-214ENST00000494047 GEMIN7Q9H840 131 aaKnown RBP8.41□□□□□ -1.06
RFC4-214ENST00000494047 CSDC2Q9Y534 153 aaKnown RBP8.41□□□□□ -1.06
RFC4-214ENST00000494047 IGLV5-45A0A087WSX0 123 aa8.4□□□□□ -1.06
RFC4-214ENST00000494047 A4D1N5 150 aa8.4□□□□□ -1.06
RFC4-214ENST00000494047 RS1O15537 224 aa8.4□□□□□ -1.06
RFC4-214ENST00000494047 IGKV3-20P01619 116 aa8.4□□□□□ -1.06
RFC4-214ENST00000494047 IGHV3-30-3P0DP02 117 aa8.4□□□□□ -1.06
RFC4-214ENST00000494047 TSPEAR-AS2P59090 65 aa8.4□□□□□ -1.06
RFC4-214ENST00000494047 HERVK_113P63121 156 aa8.4□□□□□ -1.06
RFC4-214ENST00000494047 MIAQ16674 131 aa8.4□□□□□ -1.06
RFC4-214ENST00000494047 ZFAND6Q6FIF0 208 aa8.4□□□□□ -1.06
RFC4-214ENST00000494047 FAM19A3Q7Z5A8 133 aa8.4□□□□□ -1.06
RFC4-214ENST00000494047 TMEM263Q8WUH6 116 aaKnown RBP8.4□□□□□ -1.06
RFC4-214ENST00000494047 H3BT86 120 aa8.39□□□□□ -1.07
RFC4-214ENST00000494047 SPRY2O43597 315 aa8.39□□□□□ -1.07
RFC4-214ENST00000494047 TCL1BO95988 128 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms