RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 ICOSQ9Y6W8 199 aa14.33□□□□□ -0.12
SNAPC3-206ENST00000490969 TRAV12-3A0A0B4J271 114 aa14.32□□□□□ -0.12
SNAPC3-206ENST00000490969 CSPG4Q6UVK1 2322 aa14.32□□□□□ -0.12
SNAPC3-206ENST00000490969 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.32□□□□□ -0.122e-7■■■□□ 18.1
SNAPC3-206ENST00000490969 IGLV4-3A0A075B6K6 122 aa14.32□□□□□ -0.12
SNAPC3-206ENST00000490969 IGHV3-30-3P0DP02 117 aa14.32□□□□□ -0.12
SNAPC3-206ENST00000490969 SMIM20Q8N5G0 67 aa14.32□□□□□ -0.12
SNAPC3-206ENST00000490969 APCP25054 2843 aa14.31□□□□□ -0.12
SNAPC3-206ENST00000490969 RHPN1-AS1Q9BWJ2 59 aa14.31□□□□□ -0.12
SNAPC3-206ENST00000490969 H3BT86 120 aa14.31□□□□□ -0.12
SNAPC3-206ENST00000490969 PRSS2P07478 247 aa14.31□□□□□ -0.12
SNAPC3-206ENST00000490969 MRPL23Q16540 153 aaKnown RBP14.31□□□□□ -0.12
SNAPC3-206ENST00000490969 C10orf105Q8TEF2 133 aa14.31□□□□□ -0.12
SNAPC3-206ENST00000490969 MOB4Q9Y3A3 225 aa14.31□□□□□ -0.12
SNAPC3-206ENST00000490969 NAV2Q8IVL1 2488 aa14.3□□□□□ -0.12
SNAPC3-206ENST00000490969 NPFFO15130 113 aa14.3□□□□□ -0.12
SNAPC3-206ENST00000490969 C9orf85Q96MD7 179 aa14.3□□□□□ -0.12
SNAPC3-206ENST00000490969 SPXQ9BT56 116 aa14.3□□□□□ -0.12
SNAPC3-206ENST00000490969 IGHV3-11P01762 117 aa14.3□□□□□ -0.12
SNAPC3-206ENST00000490969 SPANXA1Q9NS26 97 aa14.3□□□□□ -0.12
SNAPC3-206ENST00000490969 HERV-K104P63124 156 aa14.29□□□□□ -0.12
SNAPC3-206ENST00000490969 TIMM21Q9BVV7 248 aa14.29□□□□□ -0.12
SNAPC3-206ENST00000490969 IGHV3OR16-10A0A075B7F0 116 aa14.29□□□□□ -0.12
SNAPC3-206ENST00000490969 IGHV3-16A0A0C4DH30 117 aa14.29□□□□□ -0.12
SNAPC3-206ENST00000490969 ZNF469Q96JG9 3925 aaPredicted RBP14.28□□□□□ -0.12
SNAPC3-206ENST00000490969 COX6CP09669 75 aa14.28□□□□□ -0.12
SNAPC3-206ENST00000490969 I3L3M4 83 aa14.28□□□□□ -0.12
SNAPC3-206ENST00000490969 ADAMTSL4-AS1Q5T5F5 129 aa14.28□□□□□ -0.12
SNAPC3-206ENST00000490969 SHISA2Q6UWI4 295 aa14.28□□□□□ -0.12
SNAPC3-206ENST00000490969 PRRC2AP48634 2157 aaKnown RBP14.27□□□□□ -0.12
SNAPC3-206ENST00000490969 FAM240AA0A1B0GVK7 77 aa14.27□□□□□ -0.13
SNAPC3-206ENST00000490969 HIST2H2BCQ6DN03 193 aa14.27□□□□□ -0.13
SNAPC3-206ENST00000490969 MEIG1Q5JSS6 88 aa14.26□□□□□ -0.13
SNAPC3-206ENST00000490969 CLEC2BQ92478 149 aa14.26□□□□□ -0.13
SNAPC3-206ENST00000490969 SPANXDQ9BXN6 97 aa14.26□□□□□ -0.13
SNAPC3-206ENST00000490969 SPANXCQ9NY87 97 aa14.26□□□□□ -0.13
SNAPC3-206ENST00000490969 TRAV8-3A0A0A6YYJ7 113 aa14.26□□□□□ -0.13
SNAPC3-206ENST00000490969 DUX3Q96PT4 197 aa14.26□□□□□ -0.13
SNAPC3-206ENST00000490969 Q6ZSV7 163 aa14.25□□□□□ -0.13
SNAPC3-206ENST00000490969 PIMREGQ9BSJ6 248 aa14.25□□□□□ -0.13
SNAPC3-206ENST00000490969 LST1O00453 97 aa14.24□□□□□ -0.13
SNAPC3-206ENST00000490969 DEFB121Q5J5C9 76 aa14.24□□□□□ -0.13
SNAPC3-206ENST00000490969 ID1P41134 155 aa14.24□□□□□ -0.13
SNAPC3-206ENST00000490969 MRPS36P82909 103 aaKnown RBP14.24□□□□□ -0.13
SNAPC3-206ENST00000490969 MIAQ16674 131 aa14.24□□□□□ -0.13
SNAPC3-206ENST00000490969 USMG5Q96IX5 58 aa14.24□□□□□ -0.13
SNAPC3-206ENST00000490969 NDUFA12Q9UI09 145 aa14.24□□□□□ -0.13
SNAPC3-206ENST00000490969 CD28P10747 220 aa14.23□□□□□ -0.13
SNAPC3-206ENST00000490969 MAPK1IP1LQ8NDC0 245 aa14.23□□□□□ -0.13
SNAPC3-206ENST00000490969 DAZ1Q9NQZ3 744 aaKnown RBP14.23□□□□□ -0.13
SNAPC3-206ENST00000490969 IGHV1-58A0A0C4DH39 117 aa14.23□□□□□ -0.13
SNAPC3-206ENST00000490969 NPC2P61916 151 aa14.23□□□□□ -0.13
SNAPC3-206ENST00000490969 FAM104AQ969W3 186 aa14.22□□□□□ -0.13
SNAPC3-206ENST00000490969 TRAV12-2A0A075B6T6 113 aa14.22□□□□□ -0.13
SNAPC3-206ENST00000490969 EDN2P20800 178 aa14.22□□□□□ -0.13
SNAPC3-206ENST00000490969 DCANP1Q8TF63 244 aa14.22□□□□□ -0.13
SNAPC3-206ENST00000490969 CHCHD5Q9BSY4 110 aa14.22□□□□□ -0.13
SNAPC3-206ENST00000490969 TRBV7-7A0A0K0K1E9 115 aa14.21□□□□□ -0.13
SNAPC3-206ENST00000490969 PYGO1Q9Y3Y4 419 aa14.21□□□□□ -0.13
SNAPC3-206ENST00000490969 TRGV11A0A075B6L2 103 aa14.21□□□□□ -0.13
SNAPC3-206ENST00000490969 BRD3OSQ6XYD6 125 aa14.21□□□□□ -0.13
SNAPC3-206ENST00000490969 TMEM61Q8N0U2 210 aa14.21□□□□□ -0.13
SNAPC3-206ENST00000490969 PF4V1P10720 104 aa14.2□□□□□ -0.14
SNAPC3-206ENST00000490969 CCDC168Q8NDH2 2452 aa14.2□□□□□ -0.14
SNAPC3-206ENST00000490969 BRI3O95415 125 aa14.19□□□□□ -0.14
SNAPC3-206ENST00000490969 IGKV3-20P01619 116 aa14.19□□□□□ -0.14
SNAPC3-206ENST00000490969 VSIG2Q96IQ7 327 aa14.19□□□□□ -0.14
SNAPC3-206ENST00000490969 TEX15Q9BXT5 2789 aa14.19□□□□□ -0.14
SNAPC3-206ENST00000490969 H3BUA1 57 aa14.19□□□□□ -0.14
SNAPC3-206ENST00000490969 CEMP1Q6PRD7 247 aaPredicted RBP14.19□□□□□ -0.14
SNAPC3-206ENST00000490969 IGHV1OR15-1A0A075B7D0 117 aa14.18□□□□□ -0.14
SNAPC3-206ENST00000490969 A8MZ25 164 aa14.18□□□□□ -0.14
SNAPC3-206ENST00000490969 AVPP01185 164 aa14.18□□□□□ -0.14
SNAPC3-206ENST00000490969 RNASE13Q5GAN3 156 aaKnown RBP14.18□□□□□ -0.14
SNAPC3-206ENST00000490969 TLN2Q9Y4G6 2542 aa14.18□□□□□ -0.14
SNAPC3-206ENST00000490969 IGHV4-38-2P0DP08 117 aa14.18□□□□□ -0.14
SNAPC3-206ENST00000490969 YAE1D1Q9NRH1 226 aa14.17□□□□□ -0.14
SNAPC3-206ENST00000490969 ITPR2Q14571 2701 aa14.17□□□□□ -0.14
SNAPC3-206ENST00000490969 TMEM101Q96IK0 257 aa14.16□□□□□ -0.14
SNAPC3-206ENST00000490969 A0A096LNT2 108 aa14.15□□□□□ -0.14
SNAPC3-206ENST00000490969 LINC01587Q99440 93 aa14.15□□□□□ -0.14
SNAPC3-206ENST00000490969 CREBBPQ92793 2442 aa14.15□□□□□ -0.14
SNAPC3-206ENST00000490969 GCN1Q92616 2671 aaKnown RBP14.15□□□□□ -0.14
SNAPC3-206ENST00000490969 TINCRA0A1B0GVN0 87 aa14.15□□□□□ -0.14
SNAPC3-206ENST00000490969 IGHG2P01859 326 aa14.15□□□□□ -0.14
SNAPC3-206ENST00000490969 PLA2G2AP14555 144 aa14.15□□□□□ -0.14
SNAPC3-206ENST00000490969 MXRA5Q9NR99 2828 aa14.15□□□□□ -0.14
SNAPC3-206ENST00000490969 LY6EQ16553 131 aa14.14□□□□□ -0.15
SNAPC3-206ENST00000490969 C3orf56Q8N813 242 aa14.14□□□□□ -0.15
SNAPC3-206ENST00000490969 TMEM126AQ9H061 195 aa14.14□□□□□ -0.15
SNAPC3-206ENST00000490969 SPINK13Q1W4C9 94 aa14.14□□□□□ -0.15
SNAPC3-206ENST00000490969 K7EMT4 169 aa14.13□□□□□ -0.15
SNAPC3-206ENST00000490969 MSMBP08118 114 aa14.13□□□□□ -0.15
SNAPC3-206ENST00000490969 CR1P17927 2039 aa14.13□□□□□ -0.15
SNAPC3-206ENST00000490969 TIMM17BO60830 172 aa14.13□□□□□ -0.15
SNAPC3-206ENST00000490969 DAND5Q8N907 189 aa14.13□□□□□ -0.15
SNAPC3-206ENST00000490969 FAM236AA0A1B0GUQ0 79 aa14.12□□□□□ -0.15
SNAPC3-206ENST00000490969 FAM236BA0A1B0GV22 79 aa14.12□□□□□ -0.15
SNAPC3-206ENST00000490969 IGHV3-73A0A0B4J1V6 119 aa14.12□□□□□ -0.15
SNAPC3-206ENST00000490969 ITPR3Q14573 2671 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms