RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 TRGV4A0A0C4DH28 118 aa8.45□□□□□ -1.06
CRNKL1-204ENST00000490910 PSMB8P28062 276 aa8.45□□□□□ -1.06
CRNKL1-204ENST00000490910 TIRAPP58753 221 aa8.45□□□□□ -1.06
CRNKL1-204ENST00000490910 C20orf197Q8N268 126 aa8.45□□□□□ -1.06
CRNKL1-204ENST00000490910 A8MZ25 164 aa8.45□□□□□ -1.06
CRNKL1-204ENST00000490910 INSP01308 110 aa8.45□□□□□ -1.06
CRNKL1-204ENST00000490910 STHQ8IWL8 128 aa8.45□□□□□ -1.06
CRNKL1-204ENST00000490910 BPESC1Q9GZL8 116 aa8.45□□□□□ -1.06
CRNKL1-204ENST00000490910 PF4P02776 101 aa8.45□□□□□ -1.06
CRNKL1-204ENST00000490910 GPHB5Q86YW7 130 aa8.45□□□□□ -1.06
CRNKL1-204ENST00000490910 USP17L23D6RBM5 183 aa8.44□□□□□ -1.06
CRNKL1-204ENST00000490910 TRAV23DV6A0A075B6W5 121 aa8.44□□□□□ -1.06
CRNKL1-204ENST00000490910 SPG11Q96JI7 2443 aa8.44□□□□□ -1.06
CRNKL1-204ENST00000490910 TIMM17BO60830 172 aa8.44□□□□□ -1.06
CRNKL1-204ENST00000490910 MRAPQ8TCY5 172 aa8.44□□□□□ -1.06
CRNKL1-204ENST00000490910 ODF3BA8MYP8 253 aa8.43□□□□□ -1.06
CRNKL1-204ENST00000490910 F8W735 103 aaPredicted RBP8.43□□□□□ -1.06
CRNKL1-204ENST00000490910 Q6ZSV7 163 aa8.43□□□□□ -1.06
CRNKL1-204ENST00000490910 DSCR8Q96T75 97 aa8.43□□□□□ -1.06
CRNKL1-204ENST00000490910 H3BUA1 57 aa8.43□□□□□ -1.06
CRNKL1-204ENST00000490910 HRCT1Q6UXD1 115 aa8.43□□□□□ -1.06
CRNKL1-204ENST00000490910 RNF152Q8N8N0 203 aa8.43□□□□□ -1.06
CRNKL1-204ENST00000490910 TSHBP01222 138 aa8.43□□□□□ -1.06
CRNKL1-204ENST00000490910 C5orf42Q9H799 3197 aa8.43□□□□□ -1.06
CRNKL1-204ENST00000490910 PRRC2CQ9Y520 2896 aaKnown RBP8.43□□□□□ -1.06
CRNKL1-204ENST00000490910 TRBV12-3P01733 135 aa8.43□□□□□ -1.06
CRNKL1-204ENST00000490910 FAM236DA0A1B0GTK5 79 aa8.42□□□□□ -1.06
CRNKL1-204ENST00000490910 NDUFA1O15239 70 aa8.42□□□□□ -1.06
CRNKL1-204ENST00000490910 FAM236CP0DP71 79 aa8.42□□□□□ -1.06
CRNKL1-204ENST00000490910 C10orf105Q8TEF2 133 aa8.42□□□□□ -1.06
CRNKL1-204ENST00000490910 PYGO1Q9Y3Y4 419 aa8.42□□□□□ -1.06
CRNKL1-204ENST00000490910 CSPG4Q6UVK1 2322 aa8.42□□□□□ -1.06
CRNKL1-204ENST00000490910 C5orf56Q8N8D9 126 aa8.42□□□□□ -1.06
CRNKL1-204ENST00000490910 UBE2E2Q96LR5 201 aa8.42□□□□□ -1.06
CRNKL1-204ENST00000490910 JMJD7-PLA2G4BH0Y9G9 81 aa8.42□□□□□ -1.06
CRNKL1-204ENST00000490910 MIR7-3HGQ8N6C7 128 aa8.42□□□□□ -1.06
CRNKL1-204ENST00000490910 CLPSL1A2RUU4 121 aa8.41□□□□□ -1.06
CRNKL1-204ENST00000490910 NDUFC2O95298 119 aa8.41□□□□□ -1.06
CRNKL1-204ENST00000490910 ZNF580Q9UK33 172 aa8.41□□□□□ -1.06
CRNKL1-204ENST00000490910 TNFRSF13BO14836 293 aaPredicted RBP8.4□□□□□ -1.06
CRNKL1-204ENST00000490910 ELANEP08246 267 aa8.4□□□□□ -1.06
CRNKL1-204ENST00000490910 MRPS36P82909 103 aaKnown RBP8.4□□□□□ -1.06
CRNKL1-204ENST00000490910 EBI3Q14213 229 aa8.4□□□□□ -1.06
CRNKL1-204ENST00000490910 POM121L12Q8N7R1 296 aa8.4□□□□□ -1.06
CRNKL1-204ENST00000490910 XCL2Q9UBD3 114 aa8.4□□□□□ -1.06
CRNKL1-204ENST00000490910 RAI1Q7Z5J4 1906 aaPredicted RBP8.4□□□□□ -1.06
CRNKL1-204ENST00000490910 ADAMTSL4-AS1Q5T5F5 129 aa8.4□□□□□ -1.07
CRNKL1-204ENST00000490910 PKIGQ9Y2B9 76 aa8.39□□□□□ -1.07
CRNKL1-204ENST00000490910 U3KQE9 123 aa8.39□□□□□ -1.07
CRNKL1-204ENST00000490910 PIK3CD-AS1Q5SR53 167 aa8.38□□□□□ -1.07
CRNKL1-204ENST00000490910 PLA2G2CQ5R387 149 aa8.38□□□□□ -1.07
CRNKL1-204ENST00000490910 COX7B2Q8TF08 81 aa8.38□□□□□ -1.07
CRNKL1-204ENST00000490910 BRK1Q8WUW1 75 aa8.38□□□□□ -1.07
CRNKL1-204ENST00000490910 LINC00467Q9BRT7 94 aa8.38□□□□□ -1.07
CRNKL1-204ENST00000490910 K7EMT4 169 aa8.37□□□□□ -1.07
CRNKL1-204ENST00000490910 Q6JHZ5 121 aa8.37□□□□□ -1.07
CRNKL1-204ENST00000490910 TECTAO75443 2155 aa8.37□□□□□ -1.07
CRNKL1-204ENST00000490910 ZFP36P26651 326 aaKnown RBP8.37□□□□□ -1.07
CRNKL1-204ENST00000490910 SS18Q15532 418 aa8.37□□□□□ -1.07
CRNKL1-204ENST00000490910 ATP5EP2Q5VTU8 51 aa8.37□□□□□ -1.07
CRNKL1-204ENST00000490910 Q8N6K4 173 aa8.37□□□□□ -1.07
CRNKL1-204ENST00000490910 KLLNB2CW77 178 aa8.36□□□□□ -1.07
CRNKL1-204ENST00000490910 NCR3O14931 201 aa8.36□□□□□ -1.07
CRNKL1-204ENST00000490910 GRNP28799 593 aaKnown RBP8.36□□□□□ -1.07
CRNKL1-204ENST00000490910 LY6DQ14210 128 aa8.36□□□□□ -1.07
CRNKL1-204ENST00000490910 CCL19Q99731 98 aa8.36□□□□□ -1.07
CRNKL1-204ENST00000490910 UPK3BQ9BT76 320 aa8.36□□□□□ -1.07
CRNKL1-204ENST00000490910 TTC28Q96AY4 2481 aa8.36□□□□□ -1.07
CRNKL1-204ENST00000490910 A0A087WVE0 104 aa8.36□□□□□ -1.07
CRNKL1-204ENST00000490910 FAM222AQ5U5X8 452 aa8.36□□□□□ -1.07
CRNKL1-204ENST00000490910 C5orf38Q86SI9 138 aa8.36□□□□□ -1.07
CRNKL1-204ENST00000490910 SIRPDQ9H106 197 aa8.36□□□□□ -1.07
CRNKL1-204ENST00000490910 RPS28P62857 69 aaKnown RBP8.35□□□□□ -1.07
CRNKL1-204ENST00000490910 BLCAPP62952 87 aa8.35□□□□□ -1.07
CRNKL1-204ENST00000490910 ENHOQ6UWT2 76 aa8.35□□□□□ -1.07
CRNKL1-204ENST00000490910 TRAV25A0A0B4J276 109 aa8.35□□□□□ -1.07
CRNKL1-204ENST00000490910 CRYGAP11844 174 aa8.35□□□□□ -1.07
CRNKL1-204ENST00000490910 CHD7Q9P2D1 2997 aa8.34□□□□□ -1.07
CRNKL1-204ENST00000490910 TMEM256-PLSCR3K7ERE1 68 aa8.34□□□□□ -1.07
CRNKL1-204ENST00000490910 C9orf85Q96MD7 179 aa8.34□□□□□ -1.07
CRNKL1-204ENST00000490910 SLPIP03973 132 aa8.34□□□□□ -1.07
CRNKL1-204ENST00000490910 PROK1P58294 105 aa8.33□□□□□ -1.08
CRNKL1-204ENST00000490910 CFHR3Q02985 330 aa8.33□□□□□ -1.08
CRNKL1-204ENST00000490910 PIEZO2Q9H5I5 2752 aa8.33□□□□□ -1.08
CRNKL1-204ENST00000490910 NBL1P41271 181 aa8.33□□□□□ -1.08
CRNKL1-204ENST00000490910 PIP4P1Q86T03 277 aa8.33□□□□□ -1.08
CRNKL1-204ENST00000490910 UCNP55089 124 aa8.33□□□□□ -1.08
CRNKL1-204ENST00000490910 UBE2D4Q9Y2X8 147 aa8.32□□□□□ -1.08
CRNKL1-204ENST00000490910 HTTP42858 3142 aa8.32□□□□□ -1.08
CRNKL1-204ENST00000490910 KIF25-AS1Q9Y6Z4 181 aa8.32□□□□□ -1.08
CRNKL1-204ENST00000490910 LAMA2P24043 3122 aaKnown RBP8.32□□□□□ -1.08
CRNKL1-204ENST00000490910 AMELXQ99217 191 aa8.31□□□□□ -1.08
CRNKL1-204ENST00000490910 WFDC11Q8NEX6 87 aa8.31□□□□□ -1.08
CRNKL1-204ENST00000490910 A0A0U1RQV1 116 aa8.31□□□□□ -1.08
CRNKL1-204ENST00000490910 K7EQD1 137 aa8.3□□□□□ -1.08
CRNKL1-204ENST00000490910 XCL1P47992 114 aa8.3□□□□□ -1.08
CRNKL1-204ENST00000490910 PTPRQQ9UMZ3 2332 aa8.29□□□□□ -1.08
CRNKL1-204ENST00000490910 DPH3Q96FX2 82 aa8.29□□□□□ -1.08
CRNKL1-204ENST00000490910 A0A1W2PRX2 142 aa8.29□□□□□ -1.08
CRNKL1-204ENST00000490910 B4DSR2 109 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms