RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 FAM236CP0DP71 79 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 KRTAP10-8P60410 259 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 ERHP84090 104 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 VMA21Q3ZAQ7 101 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 C16orf47Q6ZP98 133 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 EXOC3-AS1Q8N2X6 119 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 LINC00311Q8N616 119 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 C3orf56Q8N813 242 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 UBALD1Q8TB05 177 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 AMELXQ99217 191 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 TIMM21Q9BVV7 248 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 LINC00574Q9H8X3 128 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 NDUFA4L2Q9NRX3 87 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 SNRNP200O75643 2136 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 IGLV4-60A0A075B6I1 120 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 TRBV19A0A075B6N1 114 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 IGHV5-10-1A0A0J9YXX1 117 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 TRBV10-3A0A0K0K1G6 114 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 LEPROTO15243 131 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 NDUFC1O43677 76 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 NDUFA3O95167 84 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 CGB3P0DN86 165 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 CGB7P0DN87 165 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 ZNF22P17026 224 aaPredicted RBP2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 SYNJ2BPP57105 145 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 ATP5EP2Q5VTU8 51 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 Q6ZRU5 148 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 PRNTQ86SH4 94 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 TMEM167AQ8TBQ9 72 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 KLF14Q8TD94 323 aaPredicted RBP2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 SMCR5Q8TEV8 140 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 TMEM141Q96I45 108 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 DSCR8Q96T75 97 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 TIMM17AQ99595 171 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 SLC50A1Q9BRV3 221 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 SMIM2Q9BVW6 85 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 RPUSD1Q9UJJ7 312 aaKnown RBP2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 ICOSQ9Y6W8 199 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 EXPH5Q8NEV8 1989 aa2.32□□□□□ -2.04
ECHDC1-217ENST00000488087 MYOFQ9NZM1 2061 aa2.31□□□□□ -2.04
ECHDC1-217ENST00000488087 IGHV1OR15-9A0A0B4J2B8 117 aa2.31□□□□□ -2.04
ECHDC1-217ENST00000488087 TRBV7-6A0A0J9YX20 115 aa2.31□□□□□ -2.04
ECHDC1-217ENST00000488087 KNCNA6PVL3 124 aa2.31□□□□□ -2.04
ECHDC1-217ENST00000488087 TIMM17BO60830 172 aa2.31□□□□□ -2.04
ECHDC1-217ENST00000488087 SH2D1AO60880 128 aa2.31□□□□□ -2.04
ECHDC1-217ENST00000488087 GFERP55789 205 aa2.31□□□□□ -2.04
ECHDC1-217ENST00000488087 KLKP1Q107X0 134 aa2.31□□□□□ -2.04
ECHDC1-217ENST00000488087 S100A7L2Q5SY68 101 aa2.31□□□□□ -2.04
ECHDC1-217ENST00000488087 WDR86Q86TI4 376 aa2.31□□□□□ -2.04
ECHDC1-217ENST00000488087 PRR15Q8IV56 129 aa2.31□□□□□ -2.04
ECHDC1-217ENST00000488087 C15orf56Q8N910 161 aa2.31□□□□□ -2.04
ECHDC1-217ENST00000488087 SCGB3A1Q96QR1 104 aa2.31□□□□□ -2.04
ECHDC1-217ENST00000488087 CYSTM1Q9H1C7 97 aa2.31□□□□□ -2.04
ECHDC1-217ENST00000488087 TANC2Q9HCD6 1990 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 TET2Q6N021 2002 aaPredicted RBP2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 IGHV3OR16-9A0A0B4J2B5 98 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 A0A0J9YXV3 536 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 A0A1B0GVX0 72 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 IGIPA6NJ69 53 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 IQCF6A8MYZ5 107 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 H3BRN7 92 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 IGHV1-69P01742 117 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 TLX1NBP0CAT3 122 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 FXYD7P58549 80 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 PMAIP1Q13794 54 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 DEFB110Q30KQ9 67 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 LYPD5Q6UWN5 251 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 FP248Q71RG6 208 aaPredicted RBP2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 MRPL55Q7Z7F7 128 aaKnown RBP2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 MUSTN1Q8IVN3 82 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 RNF182Q8N6D2 247 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 LINC00337Q8N6G1 96 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 CCL4L1Q8NHW4 92 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 OBSCN-AS1Q96MR7 158 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 CAMK2N2Q96S95 79 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 ZNRD1Q9P1U0 126 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 PKIGQ9Y2B9 76 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 UBE2D4Q9Y2X8 147 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 ALPK2Q86TB3 2170 aa2.3□□□□□ -2.04
ECHDC1-217ENST00000488087 MYO7BQ6PIF6 2116 aa2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 TRAV26-2A0A0B4J265 109 aa2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 TRAV41A0A0B4J266 112 aa2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 IBA57-AS1B1ANH7 110 aa2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 H7BZZ5 65 aa2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 COX7A2LO14548 114 aa2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 LYZL6O75951 148 aa2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 LGALS3P17931 250 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 XCL1P47992 114 aa2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 ZNF80P51504 273 aaPredicted RBP2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 WT1-ASQ06250 92 aa2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 RHOHQ15669 191 aa2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 LINC00483Q53H64 154 aa2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 RPL39P5Q59GN2 51 aa2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 SFTA2Q6UW10 78 aa2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 ZNF833PQ6ZTB9 187 aa2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 C10orf105Q8TEF2 133 aa2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 TMEM243Q9BU79 118 aa2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 PROK2Q9HC23 129 aa2.29□□□□□ -2.04
ECHDC1-217ENST00000488087 TRAV7A0A075B6U4 112 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms