RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 F6UB75 175 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 SYS1-DBNDD2H3BUS1 97 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 CCL25O15444 150 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 LEPROTL1O95214 131 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 PRM2P04554 102 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 SMIM17P0DL12 118 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 CT45A10P0DMU9 189 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 DEFB130BP0DP73 79 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 DEFB130AP0DP74 79 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 MGST1P10620 155 aaKnown RBP4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 NTF3P20783 257 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 MT3P25713 68 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 S100A7P31151 101 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 FOXA3P55318 350 aaPredicted RBP4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 CCL18P55774 89 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 VAMP3Q15836 100 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 TDRG1Q3Y452 100 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 C10orf113Q5VZT2 155 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 FOXI2Q6ZQN5 318 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 MIR17HGQ75NE6 70 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 LYPD1Q8N2G4 141 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 C5orf17Q8NAS9 161 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 OR10AG1Q8NH19 301 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 AP1S3Q96PC3 154 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 PAXXQ9BUH6 204 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 RNASE7Q9H1E1 156 aaKnown RBP4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 LINC00588Q9Y4M8 146 aa4.48□□□□□ -1.69
TMEM39A-209ENST00000486235 HIGD1CA8MV81 97 aa4.47□□□□□ -1.69
TMEM39A-209ENST00000486235 BUB3O43684 328 aa4.47□□□□□ -1.69
TMEM39A-209ENST00000486235 GAS8-AS1O95177 125 aa4.47□□□□□ -1.69
TMEM39A-209ENST00000486235 P01737 135 aa4.47□□□□□ -1.69
TMEM39A-209ENST00000486235 SCGB1A1P11684 91 aa4.47□□□□□ -1.69
TMEM39A-209ENST00000486235 FUSP35637 526 aaKnown RBP eCLIP4.47□□□□□ -1.69
TMEM39A-209ENST00000486235 ID1P41134 155 aa4.47□□□□□ -1.69
TMEM39A-209ENST00000486235 PLP1P60201 277 aa4.47□□□□□ -1.69
TMEM39A-209ENST00000486235 PSG9Q00887 426 aa4.47□□□□□ -1.69
TMEM39A-209ENST00000486235 OCIAD2Q56VL3 154 aa4.47□□□□□ -1.69
TMEM39A-209ENST00000486235 RNASEKQ6P5S7 137 aaKnown RBP4.47□□□□□ -1.69
TMEM39A-209ENST00000486235 NUP35Q8NFH5 326 aa4.47□□□□□ -1.69
TMEM39A-209ENST00000486235 OR5A1Q8NGJ0 315 aa4.47□□□□□ -1.69
TMEM39A-209ENST00000486235 FAM167A-AS1Q96KT0 104 aa4.47□□□□□ -1.69
TMEM39A-209ENST00000486235 TRGV9Q99603 122 aa4.47□□□□□ -1.69
TMEM39A-209ENST00000486235 EPDR1Q9UM22 224 aa4.47□□□□□ -1.69
TMEM39A-209ENST00000486235 MYCBP2O75592 4640 aa4.47□□□□□ -1.69
TMEM39A-209ENST00000486235 LTAP01374 205 aa4.46□□□□□ -1.7
TMEM39A-209ENST00000486235 COX8AP10176 69 aa4.46□□□□□ -1.7
TMEM39A-209ENST00000486235 HINT1P49773 126 aaPredicted RBP4.46□□□□□ -1.7
TMEM39A-209ENST00000486235 SLAQ13239 276 aa4.46□□□□□ -1.7
TMEM39A-209ENST00000486235 RIGQ13278 110 aa4.46□□□□□ -1.7
TMEM39A-209ENST00000486235 BVES-AS1Q5T3Y7 98 aa4.46□□□□□ -1.7
TMEM39A-209ENST00000486235 LINC01545Q5VT33 79 aa4.46□□□□□ -1.7
TMEM39A-209ENST00000486235 EBLN2Q6P2I7 272 aa4.46□□□□□ -1.7
TMEM39A-209ENST00000486235 BPIFA4PQ86YQ2 179 aa4.46□□□□□ -1.7
TMEM39A-209ENST00000486235 VPS25Q9BRG1 176 aa4.46□□□□□ -1.7
TMEM39A-209ENST00000486235 SLC25A2Q9BXI2 301 aa4.46□□□□□ -1.7
TMEM39A-209ENST00000486235 CST9LQ9H4G1 147 aa4.46□□□□□ -1.7
TMEM39A-209ENST00000486235 TMEM14CQ9P0S9 112 aa4.46□□□□□ -1.7
TMEM39A-209ENST00000486235 TRAV26-1A0A087WT03 109 aa4.45□□□□□ -1.7
TMEM39A-209ENST00000486235 IGHV1-24A0A0C4DH33 117 aa4.45□□□□□ -1.7
TMEM39A-209ENST00000486235 A0A0J9YX75 114 aa4.45□□□□□ -1.7
TMEM39A-209ENST00000486235 C19orf71A6NCJ1 209 aa4.45□□□□□ -1.7
TMEM39A-209ENST00000486235 LYRM9A8MSI8 78 aa4.45□□□□□ -1.7
TMEM39A-209ENST00000486235 F2Z2F3 143 aa4.45□□□□□ -1.7
TMEM39A-209ENST00000486235 H3BRM9 83 aa4.45□□□□□ -1.7
TMEM39A-209ENST00000486235 SOCS3O14543 225 aa4.45□□□□□ -1.7
TMEM39A-209ENST00000486235 TCL1AP56279 114 aa4.45□□□□□ -1.7
TMEM39A-209ENST00000486235 HSD52Q0P140 79 aa4.45□□□□□ -1.7
TMEM39A-209ENST00000486235 TTC32Q5I0X7 151 aa4.45□□□□□ -1.7
TMEM39A-209ENST00000486235 Q5VSD8 79 aa4.45□□□□□ -1.7
TMEM39A-209ENST00000486235 SPATA31B1PQ5VZV4 182 aa4.45□□□□□ -1.7
TMEM39A-209ENST00000486235 BOD1L2Q8IYS8 172 aa4.45□□□□□ -1.7
TMEM39A-209ENST00000486235 URB1-AS1Q96HZ7 61 aa4.45□□□□□ -1.7
TMEM39A-209ENST00000486235 OTORQ9NRC9 128 aa4.45□□□□□ -1.7
TMEM39A-209ENST00000486235 A0A1B0GUT8 65 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 C7orf71A4D174 169 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 H3BTX0 84 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 J3QR89 54 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 TAX1BP3O14907 124 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 CIDEAO60543 219 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 SLC25A5P05141 298 aaKnown RBP4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 ATP5G1P05496 136 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 NBEAP1P0C6P0 100 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 AZU1P20160 251 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 XGP55808 180 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 LYZP61626 148 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 SPINK13Q1W4C9 94 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 KIAA1644Q3SXP7 199 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 MPV17L2Q567V2 206 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 AMTNQ6UX39 209 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 FAM19A2Q8N3H0 131 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 TMEM75Q8N9X5 138 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 FXYD5Q96DB9 178 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 C18orf15Q96N68 181 aa4.44□□□□□ -1.7
TMEM39A-209ENST00000486235 TRAV12-2A0A075B6T6 113 aa4.43□□□□□ -1.7
TMEM39A-209ENST00000486235 IGKV1OR2-108A0A075B7D4 117 aa4.43□□□□□ -1.7
TMEM39A-209ENST00000486235 A0A0J9YY99 117 aa4.43□□□□□ -1.7
TMEM39A-209ENST00000486235 PLAC8L1A1L4L8 177 aa4.43□□□□□ -1.7
TMEM39A-209ENST00000486235 INSP01308 110 aa4.43□□□□□ -1.7
TMEM39A-209ENST00000486235 SMR3BP02814 79 aaPredicted RBP4.43□□□□□ -1.7
TMEM39A-209ENST00000486235 TCRAP04437 139 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms