RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 C2orf82Q6UX34 121 aa13.29□□□□□ -0.28
SSR4-209ENST00000482902 PKD1L2Q7Z442 2459 aa13.29□□□□□ -0.28
SSR4-209ENST00000482902 IGHV1OR15-1A0A075B7D0 117 aa13.29□□□□□ -0.28
SSR4-209ENST00000482902 TMEM89A2RUT3 159 aa13.29□□□□□ -0.28
SSR4-209ENST00000482902 LITAFQ99732 161 aa13.29□□□□□ -0.28
SSR4-209ENST00000482902 DSCR9P59020 149 aa13.28□□□□□ -0.28
SSR4-209ENST00000482902 NSUN5P1Q3KNT7 163 aa13.28□□□□□ -0.28
SSR4-209ENST00000482902 LINC01356Q8N9X3 169 aa13.28□□□□□ -0.28
SSR4-209ENST00000482902 M0QY20 66 aa13.28□□□□□ -0.28
SSR4-209ENST00000482902 DUX5Q96PT3 197 aa13.28□□□□□ -0.28
SSR4-209ENST00000482902 MEIG1Q5JSS6 88 aa13.27□□□□□ -0.29
SSR4-209ENST00000482902 SPANXA1Q9NS26 97 aa13.27□□□□□ -0.29
SSR4-209ENST00000482902 A0A0J9YXV3 536 aa13.27□□□□□ -0.29
SSR4-209ENST00000482902 ICOSQ9Y6W8 199 aa13.27□□□□□ -0.29
SSR4-209ENST00000482902 CELSR2Q9HCU4 2923 aa13.26□□□□□ -0.29
SSR4-209ENST00000482902 H3BT86 120 aa13.26□□□□□ -0.29
SSR4-209ENST00000482902 RHOHQ15669 191 aa13.26□□□□□ -0.29
SSR4-209ENST00000482902 FAM240AA0A1B0GVK7 77 aa13.25□□□□□ -0.29
SSR4-209ENST00000482902 ADARB2-AS1A8MUL3 147 aa13.25□□□□□ -0.29
SSR4-209ENST00000482902 MAPK1IP1LQ8NDC0 245 aa13.25□□□□□ -0.29
SSR4-209ENST00000482902 CFAP46Q8IYW2 2715 aa13.25□□□□□ -0.29
SSR4-209ENST00000482902 DOPEY1Q5JWR5 2465 aa13.24□□□□□ -0.29
SSR4-209ENST00000482902 DEFB121Q5J5C9 76 aa13.24□□□□□ -0.29
SSR4-209ENST00000482902 IGLV4-3A0A075B6K6 122 aa13.23□□□□□ -0.29
SSR4-209ENST00000482902 IGHV3-30-3P0DP02 117 aa13.23□□□□□ -0.29
SSR4-209ENST00000482902 C20orf203Q8NBC4 194 aa13.23□□□□□ -0.29
SSR4-209ENST00000482902 HOXD3P31249 432 aaPredicted RBP13.23□□□□□ -0.29
SSR4-209ENST00000482902 TRBV7-7A0A0K0K1E9 115 aa13.22□□□□□ -0.29
SSR4-209ENST00000482902 CLEC2BQ92478 149 aa13.22□□□□□ -0.29
SSR4-209ENST00000482902 CHCHD5Q9BSY4 110 aa13.22□□□□□ -0.29
SSR4-209ENST00000482902 ADAMTSL4-AS1Q5T5F5 129 aa13.22□□□□□ -0.29
SSR4-209ENST00000482902 DUX3Q96PT4 197 aa13.22□□□□□ -0.29
SSR4-209ENST00000482902 VPREB3Q9UKI3 123 aa13.22□□□□□ -0.29
SSR4-209ENST00000482902 A0A096LNT2 108 aa13.21□□□□□ -0.29
SSR4-209ENST00000482902 J3QLI3 93 aa13.21□□□□□ -0.29
SSR4-209ENST00000482902 Q6ZSV7 163 aa13.21□□□□□ -0.29
SSR4-209ENST00000482902 PRSS2P07478 247 aa13.21□□□□□ -0.3
SSR4-209ENST00000482902 LINC01587Q99440 93 aa13.21□□□□□ -0.3
SSR4-209ENST00000482902 TRGV11A0A075B6L2 103 aa13.2□□□□□ -0.3
SSR4-209ENST00000482902 LST1O00453 97 aa13.2□□□□□ -0.3
SSR4-209ENST00000482902 TIMM21Q9BVV7 248 aa13.2□□□□□ -0.3
SSR4-209ENST00000482902 SPANXDQ9BXN6 97 aa13.2□□□□□ -0.3
SSR4-209ENST00000482902 SPANXCQ9NY87 97 aa13.2□□□□□ -0.3
SSR4-209ENST00000482902 TNFRSF18Q9Y5U5 241 aa13.2□□□□□ -0.3
SSR4-209ENST00000482902 USP9XQ93008 2570 aaPredicted RBP13.2□□□□□ -0.3
SSR4-209ENST00000482902 I3L3M4 83 aa13.2□□□□□ -0.3
SSR4-209ENST00000482902 UBE2E2Q96LR5 201 aa13.2□□□□□ -0.3
SSR4-209ENST00000482902 ZNF702PQ9H963 129 aa13.2□□□□□ -0.3
SSR4-209ENST00000482902 FLNCQ14315 2725 aa13.2□□□□□ -0.3
SSR4-209ENST00000482902 SPXQ9BT56 116 aa13.19□□□□□ -0.3
SSR4-209ENST00000482902 PRRC2AP48634 2157 aaKnown RBP13.19□□□□□ -0.3
SSR4-209ENST00000482902 COX6CP09669 75 aa13.19□□□□□ -0.3
SSR4-209ENST00000482902 RBMY1A1P0DJD3 496 aaKnown RBP13.19□□□□□ -0.3
SSR4-209ENST00000482902 RBMY1CP0DJD4 496 aa13.19□□□□□ -0.3
SSR4-209ENST00000482902 HTN1P15515 57 aa13.19□□□□□ -0.3
SSR4-209ENST00000482902 RBMY1FQ15415 496 aaKnown RBP13.19□□□□□ -0.3
SSR4-209ENST00000482902 CRYBG3Q68DQ2 2970 aa13.18□□□□□ -0.3
SSR4-209ENST00000482902 TRAV8-3A0A0A6YYJ7 113 aa13.18□□□□□ -0.3
SSR4-209ENST00000482902 KNCNA6PVL3 124 aa13.18□□□□□ -0.3
SSR4-209ENST00000482902 RNF152Q8N8N0 203 aa13.18□□□□□ -0.3
SSR4-209ENST00000482902 MIAQ16674 131 aa13.18□□□□□ -0.3
SSR4-209ENST00000482902 C3orf56Q8N813 242 aa13.18□□□□□ -0.3
SSR4-209ENST00000482902 FAM104AQ969W3 186 aa13.18□□□□□ -0.3
SSR4-209ENST00000482902 DOPEY2Q9Y3R5 2298 aa13.17□□□□□ -0.3
SSR4-209ENST00000482902 Q6YL49 198 aa13.17□□□□□ -0.3
SSR4-209ENST00000482902 TMEM61Q8N0U2 210 aa13.17□□□□□ -0.3
SSR4-209ENST00000482902 CSMD2Q7Z408 3487 aa13.16□□□□□ -0.3
SSR4-209ENST00000482902 SORL1Q92673 2214 aa13.16□□□□□ -0.3
SSR4-209ENST00000482902 IGHV3-73A0A0B4J1V6 119 aa13.16□□□□□ -0.3
SSR4-209ENST00000482902 MRPS36P82909 103 aaKnown RBP13.16□□□□□ -0.3
SSR4-209ENST00000482902 TMEM126AQ9H061 195 aa13.16□□□□□ -0.3
SSR4-209ENST00000482902 SLURP1P55000 103 aa13.15□□□□□ -0.3
SSR4-209ENST00000482902 DEFB131AP59861 70 aa13.15□□□□□ -0.3
SSR4-209ENST00000482902 DEFB136Q30KP8 78 aa13.15□□□□□ -0.3
SSR4-209ENST00000482902 NDUFA12Q9UI09 145 aa13.15□□□□□ -0.3
SSR4-209ENST00000482902 NPC2P61916 151 aa13.15□□□□□ -0.3
SSR4-209ENST00000482902 C18orf65Q6ZTR6 163 aa13.15□□□□□ -0.3
SSR4-209ENST00000482902 PIEZO1Q92508 2521 aa13.15□□□□□ -0.3
SSR4-209ENST00000482902 IGHV1-58A0A0C4DH39 117 aa13.14□□□□□ -0.31
SSR4-209ENST00000482902 TMEM101Q96IK0 257 aa13.14□□□□□ -0.31
SSR4-209ENST00000482902 USP9YO00507 2555 aaPredicted RBP13.13□□□□□ -0.31
SSR4-209ENST00000482902 PROK1P58294 105 aa13.13□□□□□ -0.31
SSR4-209ENST00000482902 UTP20O75691 2785 aaKnown RBP13.13□□□□□ -0.31
SSR4-209ENST00000482902 FSHBP01225 129 aa13.13□□□□□ -0.31
SSR4-209ENST00000482902 CD28P10747 220 aa13.13□□□□□ -0.31
SSR4-209ENST00000482902 FAM236AA0A1B0GUQ0 79 aa13.12□□□□□ -0.31
SSR4-209ENST00000482902 FAM236BA0A1B0GV22 79 aa13.12□□□□□ -0.31
SSR4-209ENST00000482902 PRM2P04554 102 aa13.12□□□□□ -0.31
SSR4-209ENST00000482902 PYGO1Q9Y3Y4 419 aa13.12□□□□□ -0.31
SSR4-209ENST00000482902 IGSF10Q6WRI0 2623 aa13.12□□□□□ -0.31
SSR4-209ENST00000482902 A8MZ25 164 aa13.12□□□□□ -0.31
SSR4-209ENST00000482902 VSIG2Q96IQ7 327 aa13.12□□□□□ -0.31
SSR4-209ENST00000482902 RBMY1BA6NDE4 496 aaKnown RBP13.11□□□□□ -0.31
SSR4-209ENST00000482902 RBMY1EA6NEQ0 496 aaKnown RBP13.11□□□□□ -0.31
SSR4-209ENST00000482902 RBMY1DP0C7P1 496 aaKnown RBP13.11□□□□□ -0.31
SSR4-209ENST00000482902 CREBBPQ92793 2442 aa13.11□□□□□ -0.31
SSR4-209ENST00000482902 IGHV4-31P0DP07 118 aa13.11□□□□□ -0.31
SSR4-209ENST00000482902 EDA2RQ9HAV5 297 aa13.11□□□□□ -0.31
SSR4-209ENST00000482902 CEMP1Q6PRD7 247 aaPredicted RBP13.1□□□□□ -0.31
SSR4-209ENST00000482902 IMUPQ9GZP8 106 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms