RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 ADGRG4Q8IZF6 3080 aa10.49□□□□□ -0.73
NR1H3-220ENST00000481020 ABCA4P78363 2273 aa10.48□□□□□ -0.73
NR1H3-220ENST00000481020 SMG1Q96Q15 3661 aaKnown RBP10.48□□□□□ -0.73
NR1H3-220ENST00000481020 LY6EQ16553 131 aa10.48□□□□□ -0.73
NR1H3-220ENST00000481020 SPINK13Q1W4C9 94 aa10.48□□□□□ -0.73
NR1H3-220ENST00000481020 ATRXP46100 2492 aa10.48□□□□□ -0.73
NR1H3-220ENST00000481020 TRAV12-2A0A075B6T6 113 aa10.47□□□□□ -0.73
NR1H3-220ENST00000481020 BLCAPP62952 87 aa10.47□□□□□ -0.73
NR1H3-220ENST00000481020 FAM19A3Q7Z5A8 133 aa10.47□□□□□ -0.73
NR1H3-220ENST00000481020 CHCHD7Q9BUK0 85 aa10.47□□□□□ -0.73
NR1H3-220ENST00000481020 TRAV8-3A0A0A6YYJ7 113 aa10.47□□□□□ -0.73
NR1H3-220ENST00000481020 ZNF415Q09FC8 603 aa10.47□□□□□ -0.73
NR1H3-220ENST00000481020 DEFB104AQ8WTQ1 72 aa10.47□□□□□ -0.73
NR1H3-220ENST00000481020 IGHV3OR16-10A0A075B7F0 116 aa10.46□□□□□ -0.74
NR1H3-220ENST00000481020 CCDC179H3BU77 68 aa10.46□□□□□ -0.74
NR1H3-220ENST00000481020 COX7A2LO14548 114 aa10.46□□□□□ -0.74
NR1H3-220ENST00000481020 IGHV4-38-2P0DP08 117 aa10.46□□□□□ -0.74
NR1H3-220ENST00000481020 PKD1L2Q7Z442 2459 aa10.45□□□□□ -0.74
NR1H3-220ENST00000481020 TRACP01848 142 aa10.45□□□□□ -0.74
NR1H3-220ENST00000481020 HERVK_113P63121 156 aa10.45□□□□□ -0.74
NR1H3-220ENST00000481020 C10orf105Q8TEF2 133 aa10.45□□□□□ -0.74
NR1H3-220ENST00000481020 IGLV5-39A0A0G2JS06 123 aa10.44□□□□□ -0.74
NR1H3-220ENST00000481020 ADARB2-AS1A8MUL3 147 aa10.44□□□□□ -0.74
NR1H3-220ENST00000481020 IGHV3-53P01767 116 aa10.44□□□□□ -0.74
NR1H3-220ENST00000481020 FAM222AQ5U5X8 452 aa10.44□□□□□ -0.74
NR1H3-220ENST00000481020 LINC00643Q86TS7 51 aa10.44□□□□□ -0.74
NR1H3-220ENST00000481020 IGHV4-61A0A0C4DH41 118 aa10.43□□□□□ -0.74
NR1H3-220ENST00000481020 PF4P02776 101 aa10.43□□□□□ -0.74
NR1H3-220ENST00000481020 MSMBP08118 114 aa10.43□□□□□ -0.74
NR1H3-220ENST00000481020 SHISA2Q6UWI4 295 aa10.43□□□□□ -0.74
NR1H3-220ENST00000481020 SDIM1Q6ZPB5 146 aa10.43□□□□□ -0.74
NR1H3-220ENST00000481020 CLEC2BQ92478 149 aa10.43□□□□□ -0.74
NR1H3-220ENST00000481020 CSDC2Q9Y534 153 aaKnown RBP10.43□□□□□ -0.74
NR1H3-220ENST00000481020 ITPR1Q14643 2758 aa10.42□□□□□ -0.74
NR1H3-220ENST00000481020 IGKV3-20P01619 116 aa10.42□□□□□ -0.74
NR1H3-220ENST00000481020 CXCL5P42830 114 aa10.42□□□□□ -0.74
NR1H3-220ENST00000481020 HERV-K104P63124 156 aa10.42□□□□□ -0.74
NR1H3-220ENST00000481020 BEAN1Q3B7T3 259 aa10.42□□□□□ -0.74
NR1H3-220ENST00000481020 LINC00308Q8TCZ7 52 aa10.42□□□□□ -0.74
NR1H3-220ENST00000481020 EDN2P20800 178 aa10.41□□□□□ -0.74
NR1H3-220ENST00000481020 DAND5Q8N907 189 aa10.41□□□□□ -0.74
NR1H3-220ENST00000481020 OVOL2Q9BRP0 275 aa10.41□□□□□ -0.74
NR1H3-220ENST00000481020 MEIG1Q5JSS6 88 aa10.41□□□□□ -0.74
NR1H3-220ENST00000481020 CITED2Q99967 270 aaPredicted RBP10.41□□□□□ -0.74
NR1H3-220ENST00000481020 INAFM2P0DMQ5 153 aa10.4□□□□□ -0.74
NR1H3-220ENST00000481020 UBE2E2Q96LR5 201 aa10.4□□□□□ -0.74
NR1H3-220ENST00000481020 DUX3Q96PT4 197 aa10.4□□□□□ -0.74
NR1H3-220ENST00000481020 ACACBO00763 2458 aa10.4□□□□□ -0.74
NR1H3-220ENST00000481020 B4DSR2 109 aa10.39□□□□□ -0.75
NR1H3-220ENST00000481020 PEMTQ9UBM1 199 aa10.39□□□□□ -0.75
NR1H3-220ENST00000481020 CDKN2A-AS1Q9UH64 79 aa10.39□□□□□ -0.75
NR1H3-220ENST00000481020 CACNA1BQ00975 2339 aa10.39□□□□□ -0.75
NR1H3-220ENST00000481020 RS1O15537 224 aa10.38□□□□□ -0.75
NR1H3-220ENST00000481020 DGAT2L7PQ6IED9 249 aa10.38□□□□□ -0.75
NR1H3-220ENST00000481020 CEMP1Q6PRD7 247 aaPredicted RBP10.38□□□□□ -0.75
NR1H3-220ENST00000481020 TACC2O95359 2948 aa10.38□□□□□ -0.75
NR1H3-220ENST00000481020 RBMY1A1P0DJD3 496 aaKnown RBP10.38□□□□□ -0.75
NR1H3-220ENST00000481020 RBMY1CP0DJD4 496 aa10.38□□□□□ -0.75
NR1H3-220ENST00000481020 GNLYP22749 145 aa10.38□□□□□ -0.75
NR1H3-220ENST00000481020 DSCR9P59020 149 aa10.38□□□□□ -0.75
NR1H3-220ENST00000481020 RBMY1FQ15415 496 aaKnown RBP10.38□□□□□ -0.75
NR1H3-220ENST00000481020 COL6A6A6NMZ7 2263 aa10.37□□□□□ -0.75
NR1H3-220ENST00000481020 SYNJ2BPP57105 145 aa10.37□□□□□ -0.75
NR1H3-220ENST00000481020 CCL19Q99731 98 aa10.36□□□□□ -0.75
NR1H3-220ENST00000481020 Q9H8V8 135 aa10.36□□□□□ -0.75
NR1H3-220ENST00000481020 NBASA2RRP1 2371 aa10.36□□□□□ -0.75
NR1H3-220ENST00000481020 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.36□□□□□ -0.75
NR1H3-220ENST00000481020 TRBV10-1A0A0K0K1A3 114 aa10.36□□□□□ -0.75
NR1H3-220ENST00000481020 IGKV2-29A2NJV5 120 aaPredicted RBP10.36□□□□□ -0.75
NR1H3-220ENST00000481020 J3QLI3 93 aa10.36□□□□□ -0.75
NR1H3-220ENST00000481020 HOXD3P31249 432 aaPredicted RBP10.36□□□□□ -0.75
NR1H3-220ENST00000481020 IGHV3-73A0A0B4J1V6 119 aa10.35□□□□□ -0.75
NR1H3-220ENST00000481020 TRAV13-2A0A0B4J235 113 aa10.35□□□□□ -0.75
NR1H3-220ENST00000481020 PROK1P58294 105 aa10.35□□□□□ -0.75
NR1H3-220ENST00000481020 LINC00242Q5T6M2 205 aa10.35□□□□□ -0.75
NR1H3-220ENST00000481020 C11orf72Q8NBR9 251 aa10.35□□□□□ -0.75
NR1H3-220ENST00000481020 ZNF625Q96I27 306 aaPredicted RBP10.35□□□□□ -0.75
NR1H3-220ENST00000481020 DUX5Q96PT3 197 aa10.35□□□□□ -0.75
NR1H3-220ENST00000481020 UQCRQO14949 82 aa10.34□□□□□ -0.75
NR1H3-220ENST00000481020 RNASE13Q5GAN3 156 aaKnown RBP10.34□□□□□ -0.75
NR1H3-220ENST00000481020 LINC01587Q99440 93 aa10.34□□□□□ -0.75
NR1H3-220ENST00000481020 PRRC2AP48634 2157 aaKnown RBP10.33□□□□□ -0.76
NR1H3-220ENST00000481020 IGHV3OR16-12A0A075B7B8 117 aa10.33□□□□□ -0.76
NR1H3-220ENST00000481020 A8MZ25 164 aa10.33□□□□□ -0.76
NR1H3-220ENST00000481020 SMIM1B2RUZ4 78 aa10.33□□□□□ -0.76
NR1H3-220ENST00000481020 INSP01308 110 aa10.33□□□□□ -0.76
NR1H3-220ENST00000481020 NPC2P61916 151 aa10.33□□□□□ -0.76
NR1H3-220ENST00000481020 DAZ2Q13117 558 aaKnown RBP10.33□□□□□ -0.76
NR1H3-220ENST00000481020 HIST2H2BCQ6DN03 193 aa10.33□□□□□ -0.76
NR1H3-220ENST00000481020 HIST2H2BDQ6DRA6 164 aa10.33□□□□□ -0.76
NR1H3-220ENST00000481020 Q6ZSV7 163 aa10.33□□□□□ -0.76
NR1H3-220ENST00000481020 DAZ4Q86SG3 579 aaKnown RBP10.33□□□□□ -0.76
NR1H3-220ENST00000481020 DAZ3Q9NR90 486 aaKnown RBP10.33□□□□□ -0.76
NR1H3-220ENST00000481020 FAM236AA0A1B0GUQ0 79 aa10.33□□□□□ -0.76
NR1H3-220ENST00000481020 FAM236BA0A1B0GV22 79 aa10.33□□□□□ -0.76
NR1H3-220ENST00000481020 RPL28P46779 137 aaKnown RBP10.33□□□□□ -0.76
NR1H3-220ENST00000481020 DEFB131AP59861 70 aa10.33□□□□□ -0.76
NR1H3-220ENST00000481020 Q6ZSN1 163 aa10.33□□□□□ -0.76
NR1H3-220ENST00000481020 C5orf38Q86SI9 138 aa10.33□□□□□ -0.76
NR1H3-220ENST00000481020 SMIM20Q8N5G0 67 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms