RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 U3KQE9 123 aa15.6■□□□□ 0.09
SDF4-206ENST00000478938 MED13LQ71F56 2210 aa15.6■□□□□ 0.09
SDF4-206ENST00000478938 RELNP78509 3460 aa15.6■□□□□ 0.09
SDF4-206ENST00000478938 LINC00336Q6ZUF6 198 aa15.59■□□□□ 0.09
SDF4-206ENST00000478938 LAMA5O15230 3695 aa15.59■□□□□ 0.09
SDF4-206ENST00000478938 K7ENP7 123 aa15.59■□□□□ 0.09
SDF4-206ENST00000478938 MALP21145 153 aa15.59■□□□□ 0.09
SDF4-206ENST00000478938 PFN2P35080 140 aa15.59■□□□□ 0.09
SDF4-206ENST00000478938 IGKV3-7A0A075B6H7 116 aa15.58■□□□□ 0.09
SDF4-206ENST00000478938 DCHS2Q6V1P9 2916 aa15.58■□□□□ 0.08
SDF4-206ENST00000478938 FAM110DQ8TAY7 271 aaPredicted RBP15.58■□□□□ 0.08
SDF4-206ENST00000478938 DNAL4O96015 105 aa15.57■□□□□ 0.08
SDF4-206ENST00000478938 LINC00308Q8TCZ7 52 aa15.57■□□□□ 0.08
SDF4-206ENST00000478938 C9orf129Q5T035 196 aaKnown RBP15.57■□□□□ 0.08
SDF4-206ENST00000478938 C1orf43Q9BWL3 253 aa15.57■□□□□ 0.08
SDF4-206ENST00000478938 PRO0628Q9UI54 55 aa15.57■□□□□ 0.08
SDF4-206ENST00000478938 G3V318 75 aa15.56■□□□□ 0.08
SDF4-206ENST00000478938 HOXD3P31249 432 aaPredicted RBP15.56■□□□□ 0.08
SDF4-206ENST00000478938 LY6G5BQ8NDX9 201 aa15.56■□□□□ 0.08
SDF4-206ENST00000478938 FAM223BA6NKX1 122 aa15.56■□□□□ 0.08
SDF4-206ENST00000478938 FAM222AQ5U5X8 452 aa15.56■□□□□ 0.08
SDF4-206ENST00000478938 ZNF625Q96I27 306 aaPredicted RBP15.56■□□□□ 0.08
SDF4-206ENST00000478938 ATP6V0E1O15342 81 aa15.55■□□□□ 0.08
SDF4-206ENST00000478938 TIMM17BO60830 172 aa15.55■□□□□ 0.08
SDF4-206ENST00000478938 PRIMA1Q86XR5 153 aa15.55■□□□□ 0.08
SDF4-206ENST00000478938 FAM223AQ8IWN6 122 aa15.55■□□□□ 0.08
SDF4-206ENST00000478938 C14orf132Q9NPU4 83 aa15.55■□□□□ 0.08
SDF4-206ENST00000478938 LINC00846Q9NV44 126 aa15.55■□□□□ 0.08
SDF4-206ENST00000478938 Q6JHZ5 121 aa15.55■□□□□ 0.08
SDF4-206ENST00000478938 Q8N6K4 173 aa15.55■□□□□ 0.08
SDF4-206ENST00000478938 APRG1Q8IVJ8 170 aa15.54■□□□□ 0.08
SDF4-206ENST00000478938 SPTBN2O15020 2390 aa15.53■□□□□ 0.08
SDF4-206ENST00000478938 SOCS3O14543 225 aa15.53■□□□□ 0.08
SDF4-206ENST00000478938 CACNA1HO95180 2353 aa15.53■□□□□ 0.08
SDF4-206ENST00000478938 ATMQ13315 3056 aa15.53■□□□□ 0.08
SDF4-206ENST00000478938 SOSTDC1Q6X4U4 206 aa15.53■□□□□ 0.08
SDF4-206ENST00000478938 Q8N9W7 124 aa15.52■□□□□ 0.08
SDF4-206ENST00000478938 PKIGQ9Y2B9 76 aa15.52■□□□□ 0.08
SDF4-206ENST00000478938 EP300Q09472 2414 aaPredicted RBP15.52■□□□□ 0.08
SDF4-206ENST00000478938 LRBAP50851 2863 aa15.52■□□□□ 0.07
SDF4-206ENST00000478938 RPL35AP18077 110 aaKnown RBP15.51■□□□□ 0.07
SDF4-206ENST00000478938 ODF3BA8MYP8 253 aa15.51■□□□□ 0.07
SDF4-206ENST00000478938 TINCRA0A1B0GVN0 87 aa15.5■□□□□ 0.07
SDF4-206ENST00000478938 E7EQL1 145 aa15.5■□□□□ 0.07
SDF4-206ENST00000478938 UNQ9165/PRO28630Q6UXU0 137 aa15.5■□□□□ 0.07
SDF4-206ENST00000478938 NDUFA1O15239 70 aa15.49■□□□□ 0.07
SDF4-206ENST00000478938 IGHG2P01859 326 aa15.48■□□□□ 0.07
SDF4-206ENST00000478938 HILS1P60008 231 aa15.48■□□□□ 0.07
SDF4-206ENST00000478938 CIRBPQ14011 172 aaKnown RBP15.48■□□□□ 0.07
SDF4-206ENST00000478938 F8WDY8 70 aa15.48■□□□□ 0.07
SDF4-206ENST00000478938 IGFL2Q6UWQ7 119 aa15.48■□□□□ 0.07
SDF4-206ENST00000478938 CDKN2A-AS1Q9UH64 79 aa15.48■□□□□ 0.07
SDF4-206ENST00000478938 Q9H8V8 135 aa15.47■□□□□ 0.07
SDF4-206ENST00000478938 PTPRQQ9UMZ3 2332 aa15.47■□□□□ 0.07
SDF4-206ENST00000478938 KLLNB2CW77 178 aa15.47■□□□□ 0.07
SDF4-206ENST00000478938 TMEM243Q9BU79 118 aa15.47■□□□□ 0.07
SDF4-206ENST00000478938 KLK9Q9UKQ9 250 aa15.47■□□□□ 0.07
SDF4-206ENST00000478938 UBE2D4Q9Y2X8 147 aa15.46■□□□□ 0.07
SDF4-206ENST00000478938 CUL9Q8IWT3 2517 aa15.45■□□□□ 0.06
SDF4-206ENST00000478938 IGHV3-16A0A0C4DH30 117 aa15.45■□□□□ 0.06
SDF4-206ENST00000478938 PRORYQ9H606 182 aa15.45■□□□□ 0.06
SDF4-206ENST00000478938 TRBV12-3P01733 135 aa15.45■□□□□ 0.06
SDF4-206ENST00000478938 C9orf85Q96MD7 179 aa15.45■□□□□ 0.06
SDF4-206ENST00000478938 PIEZO2Q9H5I5 2752 aa15.44■□□□□ 0.06
SDF4-206ENST00000478938 GHRHP01286 108 aa15.44■□□□□ 0.06
SDF4-206ENST00000478938 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.44■□□□□ 0.06
SDF4-206ENST00000478938 PIMREGQ9BSJ6 248 aa15.44■□□□□ 0.06
SDF4-206ENST00000478938 IGHV3-73A0A0B4J1V6 119 aa15.43■□□□□ 0.06
SDF4-206ENST00000478938 FAM236DA0A1B0GTK5 79 aa15.43■□□□□ 0.06
SDF4-206ENST00000478938 LY6HO94772 140 aa15.43■□□□□ 0.06
SDF4-206ENST00000478938 NDUFC2O95298 119 aa15.43■□□□□ 0.06
SDF4-206ENST00000478938 FAM236CP0DP71 79 aa15.43■□□□□ 0.06
SDF4-206ENST00000478938 WFDC9Q8NEX5 89 aa15.43■□□□□ 0.06
SDF4-206ENST00000478938 C20orf197Q8N268 126 aa15.43■□□□□ 0.06
SDF4-206ENST00000478938 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.42■□□□□ 0.06
SDF4-206ENST00000478938 IGKV2-29A2NJV5 120 aaPredicted RBP15.42■□□□□ 0.06
SDF4-206ENST00000478938 RPL28P46779 137 aaKnown RBP15.41■□□□□ 0.06
SDF4-206ENST00000478938 MINOS1Q5TGZ0 78 aa15.41■□□□□ 0.06
SDF4-206ENST00000478938 TRAV12-2A0A075B6T6 113 aa15.41■□□□□ 0.06
SDF4-206ENST00000478938 TRAV23DV6A0A075B6W5 121 aa15.41■□□□□ 0.06
SDF4-206ENST00000478938 A0A087WYN8 130 aa15.41■□□□□ 0.06
SDF4-206ENST00000478938 NDUFC2-KCTD14E9PQ53 114 aa15.41■□□□□ 0.06
SDF4-206ENST00000478938 PLA2G2CQ5R387 149 aa15.4■□□□□ 0.06
SDF4-206ENST00000478938 PROK1P58294 105 aa15.4■□□□□ 0.06
SDF4-206ENST00000478938 PIK3CD-AS1Q5SR53 167 aa15.4■□□□□ 0.06
SDF4-206ENST00000478938 SPTBN1Q01082 2364 aaKnown RBP15.4■□□□□ 0.06
SDF4-206ENST00000478938 ASH1LQ9NR48 2969 aaKnown RBP15.39■□□□□ 0.05
SDF4-206ENST00000478938 APC2O95996 2303 aa15.39■□□□□ 0.05
SDF4-206ENST00000478938 NBL1P41271 181 aa15.39■□□□□ 0.05
SDF4-206ENST00000478938 KLK9Q2XQG4 91 aa15.39■□□□□ 0.05
SDF4-206ENST00000478938 TMEM86BQ8N661 226 aa15.39■□□□□ 0.05
SDF4-206ENST00000478938 WFDC11Q8NEX6 87 aa15.39■□□□□ 0.05
SDF4-206ENST00000478938 Q9UF83 564 aa15.39■□□□□ 0.05
SDF4-206ENST00000478938 NCR3O14931 201 aa15.38■□□□□ 0.05
SDF4-206ENST00000478938 IGKV3-20P01619 116 aa15.38■□□□□ 0.05
SDF4-206ENST00000478938 ZNF415Q09FC8 603 aa15.38■□□□□ 0.05
SDF4-206ENST00000478938 DEFB109BQ30KR1 87 aa15.38■□□□□ 0.05
SDF4-206ENST00000478938 RBMY1BA6NDE4 496 aaKnown RBP15.37■□□□□ 0.05
SDF4-206ENST00000478938 RBMY1EA6NEQ0 496 aaKnown RBP15.37■□□□□ 0.05
SDF4-206ENST00000478938 RBMY1DP0C7P1 496 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms