RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 CACFD1Q9UGQ2 172 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 CACNA1AO00555 2505 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 MAP3K1Q13233 1512 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 WNK3Q9BYP7 1800 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 SPTBP11277 2137 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 DOCK11Q5JSL3 2073 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 MAGI2Q86UL8 1455 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 MON2Q7Z3U7 1717 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 CEP162Q5TB80 1403 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 UACAQ9BZF9 1416 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 VWDEQ8N2E2 1590 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 SYS1-DBNDD2H3BUS1 97 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 CYB5AP00167 134 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 APOC3P02656 99 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 FXYD4P59646 89 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 DEFB103AP81534 67 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 SSBP1Q04837 148 aaKnown RBP1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 C5orf56Q8N8D9 126 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 TRGV9Q99603 122 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 NDUFA4L2Q9NRX3 87 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 MED9Q9NWA0 146 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 BLMP54132 1417 aaPredicted RBP1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 TET1Q8NFU7 2136 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 PHRF1Q9P1Y6 1649 aaKnown RBP1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 SBF2Q86WG5 1849 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 DLEC1Q9Y238 1755 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 DCAF1Q9Y4B6 1507 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 MYH8P13535 1937 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 A0A087WTM6 91 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 TRBV6-7A0A0A0MS04 114 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 CHKB-CPT1BH3BT56 60 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 H7BZZ5 65 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 NDUFC1O43677 76 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 KRTAP12-1P59990 96 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 Q8N6K4 173 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 COX7B2Q8TF08 81 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 S100A16Q96FQ6 103 aaKnown RBP1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 OBSCN-AS1Q96MR7 158 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 PRO1854Q9UHT4 67 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 SNURFQ9Y675 71 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 ERVK-7P63135 1459 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 PKD1L2Q7Z442 2459 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 OTOGLQ3ZCN5 2332 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 PI4KAP42356 2102 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 RREB1Q92766 1687 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 MLH3Q9UHC1 1453 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 IGKV2-40A0A087WW87 121 aaPredicted RBP1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 A0A0G2JND7 137 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 IGKV2D-40P01614 121 aaPredicted RBP1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 EDDM3BP56851 147 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 ELOF1P60002 83 aaKnown RBP1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 GDF5OSQ5U4N7 250 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 XAF1Q6GPH4 301 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 LINC00208Q96KT6 92 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 CDC42SE2Q9NRR3 84 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 LENEPQ9Y5L5 61 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 RRBP1Q9P2E9 1410 aaKnown RBP1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 NRXN2Q9P2S2 1712 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 SORL1Q92673 2214 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 EPRSP07814 1512 aaKnown RBP1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 COL4A6Q14031 1691 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 TNRC6BQ9UPQ9 1833 aaKnown RBP1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 TCHHQ07283 1943 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 IGLC7A0M8Q6 106 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 C10orf142B7Z368 130 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 HMGN4O00479 90 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 PPP1R17O96001 155 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 PCOTHQ58A44 107 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 SFTA2Q6UW10 78 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 ALKAL2Q6UX46 152 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 VMO1Q7Z5L0 202 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 DYNLRB1Q9NP97 96 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 NXT2Q9NPJ8 142 aaKnown RBP1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 UQCR10Q9UDW1 63 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 PLIN4Q96Q06 1357 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 CDK13Q14004 1512 aaKnown RBP1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 MRC1P22897 1456 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 MED12Q93074 2177 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 GBF1Q92538 1859 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 UQCRHLA0A096LP55 91 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 UQCRHP07919 91 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 UNQ6190/PRO20217Q6UXQ8 127 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 ZNF563Q8TA94 476 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 HIGD1BQ9P298 99 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 PARP14Q460N5 1801 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 SDK1Q7Z5N4 2213 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 LRRC37A3O60309 1634 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 TOP2BQ02880 1626 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 MUC6Q6W4X9 2439 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 EDC4Q6P2E9 1401 aaKnown RBP1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 INTS1Q8N201 2190 aaKnown RBP1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 FXYD1O00168 92 aa1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 COX6CP09669 75 aa1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 CCL18P55774 89 aa1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 C6orf52Q5T4I8 152 aa1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 FAM74A4Q5TZK3 123 aa1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 ZNF720Q7Z2F6 126 aa1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 FAM223AQ8IWN6 122 aa1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 S100A13Q99584 98 aa1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 ATP10BO94823 1461 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms