RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 EHBP1L1Q8N3D4 1523 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 PEAK1Q9H792 1746 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 FMN2Q9NZ56 1722 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 MYH1P12882 1939 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 IGKV2-40A0A087WW87 121 aaPredicted RBP1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 TRAV13-2A0A0B4J235 113 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 IGKV3D-7A0A0C4DH55 119 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 IGKV3OR2-268A0A0C4DH90 116 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 NUPR2A6NF83 97 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 GNGT2O14610 69 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 IGKV2D-40P01614 121 aaPredicted RBP1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 KRTDAPP60985 99 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 KIAA2026Q5HYC2 2103 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 SPTSSBQ8NFR3 76 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 PRO1933Q9H354 126 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 MRPL36Q9P0J6 103 aaKnown RBP1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 KLK9Q9UKQ9 250 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 PLCH1Q4KWH8 1693 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 HFM1A2PYH4 1435 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 LAMC1P11047 1609 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 USP32Q8NFA0 1604 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 WNK3Q9BYP7 1800 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 PRRC2BQ5JSZ5 2229 aaKnown RBP1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 TANC2Q9HCD6 1990 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 LAMB4A4D0S4 1761 aa1.47□□□□□ -2.17
SMNDC1-205ENST00000477763 NRAPQ86VF7 1730 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 XRN1Q8IZH2 1706 aaKnown RBP1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 BRCA2P51587 3418 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 COL4A5P29400 1685 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 ATP7BP35670 1465 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 SPTBN5Q9NRC6 3674 aaKnown RBP1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 HCG22E2RYF7 251 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 MRPS14O60783 128 aaKnown RBP1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 SIX6O95475 246 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 GYPAP02724 150 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 PRB4P10163 310 aaPredicted RBP1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 IL9P15248 144 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 ZNF818PQ6ZRF7 136 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 MYOZ3Q8TDC0 251 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 IFI27L1Q96BM0 104 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 ODF3Q96PU9 254 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 NPVFQ9HCQ7 196 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 CDC42SE1Q9NRR8 79 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 MED9Q9NWA0 146 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 BET1LQ9NYM9 111 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 MKI67P46013 3256 aaKnown RBP1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 PTPN23Q9H3S7 1636 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 CACNA1AO00555 2505 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 RANBP2P49792 3224 aaKnown RBP1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 EEA1Q15075 1411 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 AKAP12Q02952 1782 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 RBBP6Q7Z6E9 1792 aaKnown RBP1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 MYLKQ15746 1914 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 ALPK3Q96L96 1907 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 TRANK1O15050 2925 aa1.46□□□□□ -2.18
SMNDC1-205ENST00000477763 UNC79Q9P2D8 2635 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 NRXN1Q9ULB1 1477 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 AKAP11Q9UKA4 1901 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 IGKV3-7A0A075B6H7 116 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 TRBV7-1A0A0A6YYK4 115 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 TRAV12-3A0A0B4J271 114 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 NAP1L6A6NFF2 107 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 LYNX1P0DP58 116 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 PDE6GP18545 87 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 MPV17LQ2QL34 196 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 UNQ6190/PRO20217Q6UXQ8 127 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 C10orf82Q8WW14 230 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 CEP162Q5TB80 1403 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 NWD2Q9ULI1 1742 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 VCANP13611 3396 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 ANKRD36BQ8N2N9 1353 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 KIF1AQ12756 1690 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 GCC2Q8IWJ2 1684 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 FREM3P0C091 2139 aa1.45□□□□□ -2.18
SMNDC1-205ENST00000477763 HELZP42694 1942 aaKnown RBP1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 COL14A1Q05707 1796 aaKnown RBP1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 CITO14578 2027 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 SCN3AQ9NY46 2000 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 CHD8Q9HCK8 2581 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 RRBP1Q9P2E9 1410 aaKnown RBP1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 ANKRD50Q9ULJ7 1429 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 UNC80Q8N2C7 3258 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 TRAV23DV6A0A075B6W5 121 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 IGLV3-32A0A0A0MS00 114 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 TRBV7-7A0A0K0K1E9 115 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 hADV29S1A0JD25 119 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 JMJD7-PLA2G4BH0Y9G9 81 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 H3BQF6 201 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 M0R2N4 97 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 ATOX1O00244 68 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 INE1O15225 51 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 PPYP01298 95 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 IGLV3-1P01715 115 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 TFF1P04155 84 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 GNG11P61952 73 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 TSLPQ969D9 159 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 PMCHL2Q9BQD1 86 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 LIMD2Q9BT23 127 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 REG4Q9BYZ8 158 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 PRO3102Q9H379 93 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms