RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 TFF1P04155 84 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 PRB4P10163 310 aaPredicted RBP0.73□□□□□ -2.29
SSB-210ENST00000474273 HIST1H1BP16401 226 aaKnown RBP0.73□□□□□ -2.29
SSB-210ENST00000474273 CKS2P33552 79 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 SELENOWP63302 87 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 DEFB109BQ30KR1 87 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 ASB16-AS1Q495Z4 193 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 CSAG1Q6PB30 78 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 SCIMPQ6UWF3 145 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 IZUMO2Q6UXV1 221 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 CASC2Q6XLA1 102 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 C3orf62Q6ZUJ4 267 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 Q6ZUT4 128 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 MMGT1Q8N4V1 131 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 LCN9Q8WX39 176 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 COX14Q96I36 57 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 CIB3Q96Q77 187 aaPredicted RBP0.73□□□□□ -2.29
SSB-210ENST00000474273 CGREF1Q99674 301 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 ZFP30Q9Y2G7 519 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 U3KQA8 63 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 ACACAQ13085 2346 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 ABCA4P78363 2273 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 NCOA6Q14686 2063 aaPredicted RBP0.73□□□□□ -2.29
SSB-210ENST00000474273 TNRC18O15417 2968 aaPredicted RBP0.72□□□□□ -2.29
SSB-210ENST00000474273 CHD3Q12873 2000 aaKnown RBP0.72□□□□□ -2.29
SSB-210ENST00000474273 SRCAPQ6ZRS2 3230 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 CADP27708 2225 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 LOC110117498A0A087WWA1 95 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 A0A0G2JMM0 328 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 A0A1W2PPB8 328 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 KIR3DP1A8MWS1 328 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 C10orf142B7Z368 130 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 H0YGG7 62 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 J3QR89 54 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 APOC4-APOC2K7ER74 178 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 HYPMO75409 117 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 KLF7O75840 302 aaPredicted RBP0.72□□□□□ -2.29
SSB-210ENST00000474273 IGLV3-1P01715 115 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 IGHV3-33P01772 117 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 IGKCP01834 107 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 APOC2P02655 101 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 COX7CP15954 63 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 ADCYAP1P18509 176 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 ETV6P41212 452 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 BTG2P78543 158 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 DEFB110Q30KQ9 67 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 C2orf82Q6UX34 121 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 RPS27LQ71UM5 84 aaKnown RBP0.72□□□□□ -2.29
SSB-210ENST00000474273 SNX29P2Q8IUI4 249 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 C5orf17Q8NAS9 161 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 C10orf105Q8TEF2 133 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 LSM10Q969L4 123 aaKnown RBP0.72□□□□□ -2.29
SSB-210ENST00000474273 OBSCN-AS1Q96MR7 158 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 TMEM191AQ9H0A3 160 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 CYSTM1Q9H1C7 97 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 ORMDL1Q9P0S3 153 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 MUC22E2RYF6 1773 aaPredicted RBP0.72□□□□□ -2.29
SSB-210ENST00000474273 DOPEY2Q9Y3R5 2298 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 DNAH12Q6ZR08 3092 aa0.72□□□□□ -2.29
SSB-210ENST00000474273 UTRNP46939 3433 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 CEP350Q5VT06 3117 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.71□□□□□ -2.33e-10■■■■■ 30.5
SSB-210ENST00000474273 PKDREJQ9NTG1 2253 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 MED13LQ71F56 2210 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 IGKV3-7A0A075B6H7 116 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 CXorf51AA0A1B0GTR3 108 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 F8W036 122 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 F8W1H4 67 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 M0R2N4 97 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 INE1O15225 51 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 NUPR1O60356 82 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 LINC00032P0C843 101 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 ZNF25P17030 456 aaPredicted RBP0.71□□□□□ -2.3
SSB-210ENST00000474273 DCDP81605 110 aaKnown RBP0.71□□□□□ -2.3
SSB-210ENST00000474273 WHAMMP3Q1A5X7 153 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 OCIAD2Q56VL3 154 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 UNQ6190/PRO20217Q6UXQ8 127 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 ATP11AUNQ6ZP68 121 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 SLC25A26Q70HW3 274 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.71□□□□□ -2.3
SSB-210ENST00000474273 PLPP5Q8NEB5 264 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 FDCSPQ8NFU4 85 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 ATP6V0E2Q8NHE4 81 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 ZNF431Q8TF32 576 aaPredicted RBP0.71□□□□□ -2.3
SSB-210ENST00000474273 ODF3Q96PU9 254 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 KLK9Q9UKQ9 250 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 PCNTO95613 3336 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 PTPRQQ9UMZ3 2332 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 TTC28Q96AY4 2481 aa0.71□□□□□ -2.3
SSB-210ENST00000474273 CEP250Q9BV73 2442 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 CENPFP49454 3210 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 SPTBN1Q01082 2364 aaKnown RBP0.7□□□□□ -2.3
SSB-210ENST00000474273 APC2O95996 2303 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 MKI67P46013 3256 aaKnown RBP0.7□□□□□ -2.3
SSB-210ENST00000474273 WNK2Q9Y3S1 2297 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 PNMA8CA0A1B0GUJ8 204 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 IFITM5A6NNB3 132 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 TPST1O60507 370 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 PPYP01298 95 aa0.7□□□□□ -2.3
SSB-210ENST00000474273 APOC1P02654 83 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms