RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 ABCA13Q86UQ4 5058 aa6.22□□□□□ -1.41
SMC4-213ENST00000472282 LRP1BQ9NZR2 4599 aa6.21□□□□□ -1.42
SMC4-213ENST00000472282 IGHV3-38A0A0C4DH36 116 aa6.21□□□□□ -1.42
SMC4-213ENST00000472282 A0A1B0GW15 77 aa6.21□□□□□ -1.42
SMC4-213ENST00000472282 C7orf77A4D0Y5 90 aa6.21□□□□□ -1.42
SMC4-213ENST00000472282 SIVA1O15304 175 aa6.21□□□□□ -1.42
SMC4-213ENST00000472282 NDUFA5Q16718 116 aa6.21□□□□□ -1.42
SMC4-213ENST00000472282 OR10J3Q5JRS4 329 aa6.21□□□□□ -1.42
SMC4-213ENST00000472282 LELP1Q5T871 98 aa6.21□□□□□ -1.42
SMC4-213ENST00000472282 RPL39LQ96EH5 51 aaKnown RBP6.21□□□□□ -1.42
SMC4-213ENST00000472282 RNF185Q96GF1 192 aa6.21□□□□□ -1.42
SMC4-213ENST00000472282 DNAJC30Q96LL9 226 aa6.21□□□□□ -1.42
SMC4-213ENST00000472282 RPS10P5Q9NQ39 176 aa6.21□□□□□ -1.42
SMC4-213ENST00000472282 NIT2Q9NQR4 276 aa6.21□□□□□ -1.42
SMC4-213ENST00000472282 TNFRSF18Q9Y5U5 241 aa6.21□□□□□ -1.42
SMC4-213ENST00000472282 HSPG2P98160 4391 aa6.21□□□□□ -1.42
SMC4-213ENST00000472282 GAS8-AS1O95177 125 aa6.2□□□□□ -1.42
SMC4-213ENST00000472282 NCR2O95944 276 aa6.2□□□□□ -1.42
SMC4-213ENST00000472282 S100A8P05109 93 aa6.2□□□□□ -1.42
SMC4-213ENST00000472282 RAB4AP20338 218 aa6.2□□□□□ -1.42
SMC4-213ENST00000472282 RHEBQ15382 184 aa6.2□□□□□ -1.42
SMC4-213ENST00000472282 FAM104BQ5XKR9 115 aa6.2□□□□□ -1.42
SMC4-213ENST00000472282 ATP5L2Q7Z4Y8 100 aa6.2□□□□□ -1.42
SMC4-213ENST00000472282 DNAH5Q8TE73 4624 aa6.2□□□□□ -1.42
SMC4-213ENST00000472282 APOBP04114 4563 aaKnown RBP6.2□□□□□ -1.42
SMC4-213ENST00000472282 A0A087WWC5 75 aa6.19□□□□□ -1.42
SMC4-213ENST00000472282 TRAV8-6A0A0B4J262 113 aa6.19□□□□□ -1.42
SMC4-213ENST00000472282 C16orf90A8MZG2 172 aa6.19□□□□□ -1.42
SMC4-213ENST00000472282 SMKR1H3BMG3 65 aa6.19□□□□□ -1.42
SMC4-213ENST00000472282 SNAPINO95295 136 aa6.19□□□□□ -1.42
SMC4-213ENST00000472282 MRPL51Q4U2R6 128 aaKnown RBP6.19□□□□□ -1.42
SMC4-213ENST00000472282 KCNIP4Q6PIL6 250 aa6.19□□□□□ -1.42
SMC4-213ENST00000472282 SVBPQ8N300 66 aa6.19□□□□□ -1.42
SMC4-213ENST00000472282 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.19□□□□□ -1.42
SMC4-213ENST00000472282 MRAP2Q96G30 205 aa6.19□□□□□ -1.42
SMC4-213ENST00000472282 BTF3L4Q96K17 158 aa6.19□□□□□ -1.42
SMC4-213ENST00000472282 IMMP2LQ96T52 175 aa6.19□□□□□ -1.42
SMC4-213ENST00000472282 URGCP-MRPS24S4R325 110 aa6.19□□□□□ -1.42
SMC4-213ENST00000472282 S100PP25815 95 aa6.18□□□□□ -1.42
SMC4-213ENST00000472282 RPS10P46783 165 aaKnown RBP6.18□□□□□ -1.42
SMC4-213ENST00000472282 TTC32Q5I0X7 151 aa6.18□□□□□ -1.42
SMC4-213ENST00000472282 SPATA12Q7Z6I5 190 aa6.18□□□□□ -1.42
SMC4-213ENST00000472282 DAZ4Q86SG3 579 aaKnown RBP6.18□□□□□ -1.42
SMC4-213ENST00000472282 DEFB104AQ8WTQ1 72 aa6.18□□□□□ -1.42
SMC4-213ENST00000472282 FRZBQ92765 325 aa6.18□□□□□ -1.42
SMC4-213ENST00000472282 DAZ3Q9NR90 486 aaKnown RBP6.18□□□□□ -1.42
SMC4-213ENST00000472282 TMEM242Q9NWH2 141 aa6.18□□□□□ -1.42
SMC4-213ENST00000472282 TRAV9-1A0A075B6T8 112 aa6.17□□□□□ -1.42
SMC4-213ENST00000472282 TRBV6-8A0A0A6YYG3 113 aa6.17□□□□□ -1.42
SMC4-213ENST00000472282 SDHAF1A6NFY7 115 aa6.17□□□□□ -1.42
SMC4-213ENST00000472282 DNAH10OSP0CZ25 163 aa6.17□□□□□ -1.42
SMC4-213ENST00000472282 FUSP35637 526 aaKnown RBP eCLIP6.17□□□□□ -1.42
SMC4-213ENST00000472282 TMEM97Q5BJF2 176 aa6.17□□□□□ -1.42
SMC4-213ENST00000472282 Q6ZRN7 208 aaPredicted RBP6.17□□□□□ -1.42
SMC4-213ENST00000472282 NTM-AS1Q6ZSK4 140 aa6.17□□□□□ -1.42
SMC4-213ENST00000472282 TRBV6-5A0A0K0K1A5 114 aa6.16□□□□□ -1.42
SMC4-213ENST00000472282 D6R8Y8 96 aa6.16□□□□□ -1.42
SMC4-213ENST00000472282 IGHV3-30P01768 117 aa6.16□□□□□ -1.42
SMC4-213ENST00000472282 IGHV3-33P01772 117 aa6.16□□□□□ -1.42
SMC4-213ENST00000472282 IGHV3-30-3P0DP02 117 aa6.16□□□□□ -1.42
SMC4-213ENST00000472282 IGHV3-30-5P0DP03 117 aa6.16□□□□□ -1.42
SMC4-213ENST00000472282 CKS2P33552 79 aa6.16□□□□□ -1.42
SMC4-213ENST00000472282 LINC01556Q5JQF7 62 aa6.16□□□□□ -1.42
SMC4-213ENST00000472282 NRACQ8N912 160 aa6.16□□□□□ -1.42
SMC4-213ENST00000472282 TMEM70Q9BUB7 260 aa6.16□□□□□ -1.42
SMC4-213ENST00000472282 CDIP1Q9H305 208 aa6.16□□□□□ -1.42
SMC4-213ENST00000472282 ST20Q9HBF5 79 aa6.16□□□□□ -1.42
SMC4-213ENST00000472282 TRBV25-1A0A075B6N4 114 aa6.15□□□□□ -1.42
SMC4-213ENST00000472282 IGHV1-24A0A0C4DH33 117 aa6.15□□□□□ -1.42
SMC4-213ENST00000472282 CDK2AP2O75956 126 aa6.15□□□□□ -1.42
SMC4-213ENST00000472282 COTL1Q14019 142 aa6.15□□□□□ -1.42
SMC4-213ENST00000472282 ATRAIDQ6UW56 229 aa6.15□□□□□ -1.42
SMC4-213ENST00000472282 TMEM136Q6ZRR5 245 aa6.15□□□□□ -1.42
SMC4-213ENST00000472282 NIT1Q86X76 327 aa6.15□□□□□ -1.42
SMC4-213ENST00000472282 CHCHD5Q9BSY4 110 aa6.15□□□□□ -1.42
SMC4-213ENST00000472282 TRAV9-2A0A087WT02 112 aa6.14□□□□□ -1.43
SMC4-213ENST00000472282 TNFRSF6BO95407 300 aa6.14□□□□□ -1.43
SMC4-213ENST00000472282 PPP1R17O96001 155 aa6.14□□□□□ -1.43
SMC4-213ENST00000472282 NPYP01303 97 aa6.14□□□□□ -1.43
SMC4-213ENST00000472282 BTF3P20290 206 aaKnown RBP6.14□□□□□ -1.43
SMC4-213ENST00000472282 PMCHP20382 165 aa6.14□□□□□ -1.43
SMC4-213ENST00000472282 AMTP48728 403 aa6.14□□□□□ -1.43
SMC4-213ENST00000472282 POLR2KP53803 58 aaKnown RBP6.14□□□□□ -1.43
SMC4-213ENST00000472282 SUMO2P61956 95 aaKnown RBP6.14□□□□□ -1.43
SMC4-213ENST00000472282 GAGE6Q13070 117 aa6.14□□□□□ -1.43
SMC4-213ENST00000472282 IQCJQ1A5X6 159 aa6.14□□□□□ -1.43
SMC4-213ENST00000472282 ORMDL3Q8N138 153 aa6.14□□□□□ -1.43
SMC4-213ENST00000472282 C10orf126Q8N4M7 172 aa6.14□□□□□ -1.43
SMC4-213ENST00000472282 MAPKAPK5-AS1Q8N8E1 139 aa6.14□□□□□ -1.43
SMC4-213ENST00000472282 A0A087WX48 190 aa6.13□□□□□ -1.43
SMC4-213ENST00000472282 TGIF2-C20orf24A0A0A6YYL0 155 aa6.13□□□□□ -1.43
SMC4-213ENST00000472282 TRBV27A0A0K0K1C4 114 aa6.13□□□□□ -1.43
SMC4-213ENST00000472282 I3L3M4 83 aa6.13□□□□□ -1.43
SMC4-213ENST00000472282 K7EP13 123 aa6.13□□□□□ -1.43
SMC4-213ENST00000472282 HLA-DQA1P01909 254 aa6.13□□□□□ -1.43
SMC4-213ENST00000472282 APCSP02743 223 aa6.13□□□□□ -1.43
SMC4-213ENST00000472282 PPBPP02775 128 aa6.13□□□□□ -1.43
SMC4-213ENST00000472282 ELOBQ15370 118 aa6.13□□□□□ -1.43
SMC4-213ENST00000472282 MPV17L2Q567V2 206 aa6.13□□□□□ -1.43
SMC4-213ENST00000472282 PRELID3AQ96N28 172 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms