RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 GNG14A0A1W2PPG7 69 aa-1.36□□□□□ -2.63
SMC4-207ENST00000467263 S100A5P33763 92 aa-1.36□□□□□ -2.63
SMC4-207ENST00000467263 CHD8Q9HCK8 2581 aa-1.36□□□□□ -2.63
SMC4-207ENST00000467263 LAMC1P11047 1609 aa-1.37□□□□□ -2.63
SMC4-207ENST00000467263 K7EQZ3 153 aa-1.37□□□□□ -2.63
SMC4-207ENST00000467263 PITX3O75364 302 aa-1.37□□□□□ -2.63
SMC4-207ENST00000467263 IGLC6P0CF74 106 aa-1.37□□□□□ -2.63
SMC4-207ENST00000467263 CTAGE3PQ8IX95 158 aa-1.37□□□□□ -2.63
SMC4-207ENST00000467263 LINC00312Q9Y6C7 94 aa-1.37□□□□□ -2.63
SMC4-207ENST00000467263 IL5P05113 134 aa-1.38□□□□□ -2.63
SMC4-207ENST00000467263 MT4P47944 62 aa-1.38□□□□□ -2.63
SMC4-207ENST00000467263 ZNF818PQ6ZRF7 136 aa-1.38□□□□□ -2.63
SMC4-207ENST00000467263 TP53AIP1Q9HCN2 124 aa-1.38□□□□□ -2.63
SMC4-207ENST00000467263 SPANXA1Q9NS26 97 aa-1.38□□□□□ -2.63
SMC4-207ENST00000467263 MYH8P13535 1937 aa-1.38□□□□□ -2.63
SMC4-207ENST00000467263 LRRC37A3O60309 1634 aa-1.39□□□□□ -2.63
SMC4-207ENST00000467263 LRP6O75581 1613 aa-1.39□□□□□ -2.63
SMC4-207ENST00000467263 H0YJX3 145 aa-1.39□□□□□ -2.63
SMC4-207ENST00000467263 S100A7L2Q5SY68 101 aa-1.39□□□□□ -2.63
SMC4-207ENST00000467263 NF1P21359 2839 aa-1.4□□□□□ -2.63
SMC4-207ENST00000467263 DCDP81605 110 aaKnown RBP-1.4□□□□□ -2.63
SMC4-207ENST00000467263 HIST1H1AQ02539 215 aaPredicted RBP-1.4□□□□□ -2.63
SMC4-207ENST00000467263 Q6ZUT4 128 aa-1.4□□□□□ -2.63
SMC4-207ENST00000467263 PSMG3Q9BT73 122 aaPredicted RBP-1.4□□□□□ -2.63
SMC4-207ENST00000467263 ERCC6L2Q5T890 1561 aa-1.4□□□□□ -2.63
SMC4-207ENST00000467263 PIPP12273 146 aaPredicted RBP-1.41□□□□□ -2.64
SMC4-207ENST00000467263 CBLN1P23435 193 aa-1.41□□□□□ -2.64
SMC4-207ENST00000467263 AIF1LQ9BQI0 150 aa-1.41□□□□□ -2.64
SMC4-207ENST00000467263 LRP1BQ9NZR2 4599 aa-1.41□□□□□ -2.64
SMC4-207ENST00000467263 DOPEY1Q5JWR5 2465 aa-1.41□□□□□ -2.64
SMC4-207ENST00000467263 DAPK1P53355 1430 aa-1.41□□□□□ -2.64
SMC4-207ENST00000467263 ADGRB1O14514 1584 aa-1.42□□□□□ -2.64
SMC4-207ENST00000467263 S100A3P33764 101 aa-1.42□□□□□ -2.64
SMC4-207ENST00000467263 CCL18P55774 89 aa-1.42□□□□□ -2.64
SMC4-207ENST00000467263 LAMA5O15230 3695 aa-1.42□□□□□ -2.64
SMC4-207ENST00000467263 OVOS2A0A0J9YW53 1432 aa-1.42□□□□□ -2.64
SMC4-207ENST00000467263 OVOS2Q6IE36 1432 aa-1.42□□□□□ -2.64
SMC4-207ENST00000467263 LINC00694P0DN24 101 aa-1.43□□□□□ -2.64
SMC4-207ENST00000467263 NEFHP12036 1026 aa-1.43□□□□□ -2.64
SMC4-207ENST00000467263 SPAG11AQ6PDA7 123 aa-1.43□□□□□ -2.64
SMC4-207ENST00000467263 TMEM2Q9UHN6 1383 aa-1.44□□□□□ -2.64
SMC4-207ENST00000467263 I3L2K1 104 aa-1.44□□□□□ -2.64
SMC4-207ENST00000467263 SNCGO76070 127 aa-1.44□□□□□ -2.64
SMC4-207ENST00000467263 SPTSSAQ969W0 71 aa-1.44□□□□□ -2.64
SMC4-207ENST00000467263 SMIM3Q9BZL3 60 aa-1.44□□□□□ -2.64
SMC4-207ENST00000467263 AGPAT4-IT1Q9H0P7 198 aa-1.44□□□□□ -2.64
SMC4-207ENST00000467263 DISP2A7MBM2 1401 aa-1.44□□□□□ -2.64
SMC4-207ENST00000467263 CASKIN1Q8WXD9 1431 aa-1.44□□□□□ -2.64
SMC4-207ENST00000467263 PRDM2Q13029 1718 aa-1.44□□□□□ -2.64
SMC4-207ENST00000467263 PRKDCP78527 4128 aaKnown RBP-1.44□□□□□ -2.64
SMC4-207ENST00000467263 CNOT1A5YKK6 2376 aaKnown RBP-1.44□□□□□ -2.64
SMC4-207ENST00000467263 LOC730098B7Z3J9 87 aa-1.45□□□□□ -2.64
SMC4-207ENST00000467263 PPP1R17O96001 155 aa-1.45□□□□□ -2.64
SMC4-207ENST00000467263 M0R135 149 aa-1.46□□□□□ -2.64
SMC4-207ENST00000467263 RRAS2P62070 204 aaPredicted RBP-1.46□□□□□ -2.64
SMC4-207ENST00000467263 CCL8P80075 99 aa-1.46□□□□□ -2.64
SMC4-207ENST00000467263 MRPL40Q9NQ50 206 aaKnown RBP-1.46□□□□□ -2.64
SMC4-207ENST00000467263 R4GMQ9 66 aa-1.46□□□□□ -2.64
SMC4-207ENST00000467263 TSC2P49815 1807 aa-1.46□□□□□ -2.64
SMC4-207ENST00000467263 NWD2Q9ULI1 1742 aa-1.46□□□□□ -2.64
SMC4-207ENST00000467263 TRBV6-1A0A0K0K1D8 114 aa-1.47□□□□□ -2.64
SMC4-207ENST00000467263 NDUFB6O95139 128 aa-1.47□□□□□ -2.64
SMC4-207ENST00000467263 SMIM4Q8WVI0 70 aa-1.47□□□□□ -2.64
SMC4-207ENST00000467263 SEC11CQ9BY50 192 aa-1.47□□□□□ -2.64
SMC4-207ENST00000467263 URB1O60287 2271 aaKnown RBP-1.47□□□□□ -2.65
SMC4-207ENST00000467263 ZNF236Q9UL36 1845 aa-1.47□□□□□ -2.65
SMC4-207ENST00000467263 J3QR89 54 aa-1.48□□□□□ -2.65
SMC4-207ENST00000467263 USH2AO75445 5202 aa-1.48□□□□□ -2.65
SMC4-207ENST00000467263 CTXND1A0A1B0GTU2 59 aa-1.49□□□□□ -2.65
SMC4-207ENST00000467263 TSPAN19P0C672 248 aa-1.49□□□□□ -2.65
SMC4-207ENST00000467263 TAC4Q86UU9 113 aa-1.49□□□□□ -2.65
SMC4-207ENST00000467263 HYDINQ4G0P3 5121 aa-1.49□□□□□ -2.65
SMC4-207ENST00000467263 TGP01266 2768 aa-1.49□□□□□ -2.65
SMC4-207ENST00000467263 MRC1P22897 1456 aa-1.5□□□□□ -2.65
SMC4-207ENST00000467263 PIGYQ3MUY2 71 aa-1.5□□□□□ -2.65
SMC4-207ENST00000467263 PI4KAP42356 2102 aa-1.51□□□□□ -2.65
SMC4-207ENST00000467263 LRRC37A2A6NM11 1700 aa-1.51□□□□□ -2.65
SMC4-207ENST00000467263 K7ERU9 68 aa-1.51□□□□□ -2.65
SMC4-207ENST00000467263 NCR2O95944 276 aa-1.51□□□□□ -2.65
SMC4-207ENST00000467263 CKS1BP61024 79 aa-1.51□□□□□ -2.65
SMC4-207ENST00000467263 PRG4Q92954 1404 aaPredicted RBP-1.51□□□□□ -2.65
SMC4-207ENST00000467263 PAPPAQ13219 1627 aa-1.51□□□□□ -2.65
SMC4-207ENST00000467263 RYR3Q15413 4870 aa-1.52□□□□□ -2.65
SMC4-207ENST00000467263 M0R2Z0 102 aa-1.52□□□□□ -2.65
SMC4-207ENST00000467263 SCGB1A1P11684 91 aa-1.52□□□□□ -2.65
SMC4-207ENST00000467263 SPRR1BP22528 89 aa-1.52□□□□□ -2.65
SMC4-207ENST00000467263 FLGP20930 4061 aaPredicted RBP-1.52□□□□□ -2.65
SMC4-207ENST00000467263 PXDNQ92626 1479 aa-1.52□□□□□ -2.65
SMC4-207ENST00000467263 SVEP1Q4LDE5 3571 aa-1.53□□□□□ -2.65
SMC4-207ENST00000467263 SIX6O95475 246 aa-1.53□□□□□ -2.65
SMC4-207ENST00000467263 SCIMPQ6UWF3 145 aa-1.53□□□□□ -2.65
SMC4-207ENST00000467263 GSKIPQ9P0R6 139 aa-1.53□□□□□ -2.65
SMC4-207ENST00000467263 HCG22E2RYF7 251 aa-1.54□□□□□ -2.66
SMC4-207ENST00000467263 GOLGA4Q13439 2230 aaKnown RBP-1.54□□□□□ -2.66
SMC4-207ENST00000467263 SPEF2Q9C093 1822 aa-1.54□□□□□ -2.66
SMC4-207ENST00000467263 IFT140Q96RY7 1462 aa-1.55□□□□□ -2.66
SMC4-207ENST00000467263 C10orf128Q5T292 105 aa-1.55□□□□□ -2.66
SMC4-207ENST00000467263 TMEM170BQ5T4T1 132 aa-1.55□□□□□ -2.66
SMC4-207ENST00000467263 Q6JHZ5 121 aa-1.55□□□□□ -2.66
SMC4-207ENST00000467263 RYR1P21817 5038 aa-1.56□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms