RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 IGKV2D-40P01614 121 aaPredicted RBP1.93□□□□□ -2.1
PTCD3-205ENST00000464541 NMBP08949 121 aa1.93□□□□□ -2.1
PTCD3-205ENST00000464541 FXYD4P59646 89 aa1.93□□□□□ -2.1
PTCD3-205ENST00000464541 UBE2D3P61077 147 aa1.93□□□□□ -2.1
PTCD3-205ENST00000464541 UBE2D2P62837 147 aa1.93□□□□□ -2.1
PTCD3-205ENST00000464541 TMEM170BQ5T4T1 132 aa1.93□□□□□ -2.1
PTCD3-205ENST00000464541 Q8N6K4 173 aa1.93□□□□□ -2.1
PTCD3-205ENST00000464541 R4GMQ9 66 aa1.93□□□□□ -2.1
PTCD3-205ENST00000464541 V9GYH0 126 aa1.93□□□□□ -2.1
PTCD3-205ENST00000464541 V9GYV3 84 aa1.93□□□□□ -2.1
PTCD3-205ENST00000464541 CHD3Q12873 2000 aaKnown RBP1.93□□□□□ -2.1
PTCD3-205ENST00000464541 LAMC3Q9Y6N6 1575 aa1.93□□□□□ -2.1
PTCD3-205ENST00000464541 SNRNP200O75643 2136 aaKnown RBP1.93□□□□□ -2.1
PTCD3-205ENST00000464541 TOPAZ1Q8N9V7 1692 aa1.93□□□□□ -2.1
PTCD3-205ENST00000464541 KIAA0100Q14667 2235 aaKnown RBP1.93□□□□□ -2.1
PTCD3-205ENST00000464541 SIP14410 1827 aa1.92□□□□□ -2.1
PTCD3-205ENST00000464541 TRAV22A0A0B4J277 110 aa1.92□□□□□ -2.1
PTCD3-205ENST00000464541 HCRTO43612 131 aa1.92□□□□□ -2.1
PTCD3-205ENST00000464541 BCE1O60756 84 aa1.92□□□□□ -2.1
PTCD3-205ENST00000464541 SPAG11BQ08648 103 aa1.92□□□□□ -2.1
PTCD3-205ENST00000464541 PMCHL1Q16048 86 aa1.92□□□□□ -2.1
PTCD3-205ENST00000464541 SPAG11AQ6PDA7 123 aa1.92□□□□□ -2.1
PTCD3-205ENST00000464541 ZNF720Q7Z2F6 126 aa1.92□□□□□ -2.1
PTCD3-205ENST00000464541 Q86TA4 180 aa1.92□□□□□ -2.1
PTCD3-205ENST00000464541 KRTAP4-1Q9BYQ7 146 aa1.92□□□□□ -2.1
PTCD3-205ENST00000464541 MAGI2Q86UL8 1455 aa1.92□□□□□ -2.1
PTCD3-205ENST00000464541 MLH3Q9UHC1 1453 aa1.92□□□□□ -2.1
PTCD3-205ENST00000464541 ADGRB2O60241 1585 aa1.92□□□□□ -2.1
PTCD3-205ENST00000464541 MUC22E2RYF6 1773 aaPredicted RBP1.92□□□□□ -2.1
PTCD3-205ENST00000464541 BLMP54132 1417 aaPredicted RBP1.91□□□□□ -2.1
PTCD3-205ENST00000464541 ZGRF1Q86YA3 2104 aa1.91□□□□□ -2.1
PTCD3-205ENST00000464541 DOCK10Q96BY6 2186 aa1.91□□□□□ -2.1
PTCD3-205ENST00000464541 IGKV3D-7A0A0C4DH55 119 aa1.91□□□□□ -2.1
PTCD3-205ENST00000464541 IGKV3OR2-268A0A0C4DH90 116 aa1.91□□□□□ -2.1
PTCD3-205ENST00000464541 A0A0G2JND7 137 aa1.91□□□□□ -2.1
PTCD3-205ENST00000464541 KANTRA0A1W2PQU2 76 aa1.91□□□□□ -2.1
PTCD3-205ENST00000464541 FXYD3Q14802 87 aa1.91□□□□□ -2.1
PTCD3-205ENST00000464541 AMELXQ99217 191 aa1.91□□□□□ -2.1
PTCD3-205ENST00000464541 CYSTM1Q9H1C7 97 aa1.91□□□□□ -2.1
PTCD3-205ENST00000464541 ST20Q9HBF5 79 aa1.91□□□□□ -2.1
PTCD3-205ENST00000464541 NDUFA4L2Q9NRX3 87 aa1.91□□□□□ -2.1
PTCD3-205ENST00000464541 FBN3Q75N90 2809 aa1.91□□□□□ -2.1
PTCD3-205ENST00000464541 KDM5DQ9BY66 1539 aa1.91□□□□□ -2.1
PTCD3-205ENST00000464541 PCDH15Q96QU1 1955 aa1.9□□□□□ -2.1
PTCD3-205ENST00000464541 ZNF142P52746 1687 aaPredicted RBP1.9□□□□□ -2.1
PTCD3-205ENST00000464541 MYH8P13535 1937 aa1.9□□□□□ -2.11
PTCD3-205ENST00000464541 IGLC7A0M8Q6 106 aa1.9□□□□□ -2.11
PTCD3-205ENST00000464541 IGKV2-29A2NJV5 120 aaPredicted RBP1.9□□□□□ -2.11
PTCD3-205ENST00000464541 TMEM14DPA8MWL7 114 aa1.9□□□□□ -2.11
PTCD3-205ENST00000464541 FXYD1O00168 92 aa1.9□□□□□ -2.11
PTCD3-205ENST00000464541 UNQ6190/PRO20217Q6UXQ8 127 aa1.9□□□□□ -2.11
PTCD3-205ENST00000464541 Q6ZQY7 126 aa1.9□□□□□ -2.11
PTCD3-205ENST00000464541 VMO1Q7Z5L0 202 aa1.9□□□□□ -2.11
PTCD3-205ENST00000464541 SPCS1Q9Y6A9 102 aa1.9□□□□□ -2.11
PTCD3-205ENST00000464541 LRRC37A3O60309 1634 aa1.9□□□□□ -2.11
PTCD3-205ENST00000464541 MYO18AQ92614 2054 aaKnown RBP1.9□□□□□ -2.11
PTCD3-205ENST00000464541 CEP162Q5TB80 1403 aa1.9□□□□□ -2.11
PTCD3-205ENST00000464541 PTPRDP23468 1912 aa1.89□□□□□ -2.11
PTCD3-205ENST00000464541 ARFGEF3Q5TH69 2177 aa1.89□□□□□ -2.11
PTCD3-205ENST00000464541 PATJQ8NI35 1801 aa1.89□□□□□ -2.11
PTCD3-205ENST00000464541 ATP10BO94823 1461 aa1.89□□□□□ -2.11
PTCD3-205ENST00000464541 NBDYA0A0U1RRE5 68 aa1.89□□□□□ -2.11
PTCD3-205ENST00000464541 CLPSL1A2RUU4 121 aa1.89□□□□□ -2.11
PTCD3-205ENST00000464541 HMGN4O00479 90 aa1.89□□□□□ -2.11
PTCD3-205ENST00000464541 CAV3P56539 151 aa1.89□□□□□ -2.11
PTCD3-205ENST00000464541 KLKP1Q107X0 134 aa1.89□□□□□ -2.11
PTCD3-205ENST00000464541 TDRG1Q3Y452 100 aa1.89□□□□□ -2.11
PTCD3-205ENST00000464541 Q5VV11 94 aa1.89□□□□□ -2.11
PTCD3-205ENST00000464541 ALKAL2Q6UX46 152 aa1.89□□□□□ -2.11
PTCD3-205ENST00000464541 C5orf56Q8N8D9 126 aa1.89□□□□□ -2.11
PTCD3-205ENST00000464541 CDC42SE2Q9NRR3 84 aa1.89□□□□□ -2.11
PTCD3-205ENST00000464541 EPRSP07814 1512 aaKnown RBP1.89□□□□□ -2.11
PTCD3-205ENST00000464541 MAP3K1Q13233 1512 aa1.89□□□□□ -2.11
PTCD3-205ENST00000464541 EDC4Q6P2E9 1401 aaKnown RBP1.89□□□□□ -2.11
PTCD3-205ENST00000464541 FANCAO15360 1455 aa1.88□□□□□ -2.11
PTCD3-205ENST00000464541 ERVK-7P63135 1459 aa1.88□□□□□ -2.11
PTCD3-205ENST00000464541 TRBV25-1A0A075B6N4 114 aa1.88□□□□□ -2.11
PTCD3-205ENST00000464541 H7BZZ5 65 aa1.88□□□□□ -2.11
PTCD3-205ENST00000464541 SAA2P0DJI9 122 aaPredicted RBP1.88□□□□□ -2.11
PTCD3-205ENST00000464541 SNRPFP62306 86 aaKnown RBP1.88□□□□□ -2.11
PTCD3-205ENST00000464541 SHANK2Q9UPX8 1470 aa1.88□□□□□ -2.11
PTCD3-205ENST00000464541 ZNF815PA8K554 130 aa1.87□□□□□ -2.11
PTCD3-205ENST00000464541 UNC13BO14795 1591 aa1.87□□□□□ -2.11
PTCD3-205ENST00000464541 ACYP1P07311 99 aa1.87□□□□□ -2.11
PTCD3-205ENST00000464541 CR1P17927 2039 aa1.87□□□□□ -2.11
PTCD3-205ENST00000464541 ZNF563Q8TA94 476 aa1.87□□□□□ -2.11
PTCD3-205ENST00000464541 SBF2Q86WG5 1849 aa1.87□□□□□ -2.11
PTCD3-205ENST00000464541 MED13Q9UHV7 2174 aa1.86□□□□□ -2.11
PTCD3-205ENST00000464541 DLEC1Q9Y238 1755 aa1.86□□□□□ -2.11
PTCD3-205ENST00000464541 SMIM31A0A1B0GVY4 71 aa1.86□□□□□ -2.11
PTCD3-205ENST00000464541 F8VRH5 84 aa1.86□□□□□ -2.11
PTCD3-205ENST00000464541 ARL14EPLP0DKL9 152 aa1.86□□□□□ -2.11
PTCD3-205ENST00000464541 ETDBQ3ZM63 59 aa1.86□□□□□ -2.11
PTCD3-205ENST00000464541 PSMG4Q5JS54 123 aa1.86□□□□□ -2.11
PTCD3-205ENST00000464541 SFTA2Q6UW10 78 aa1.86□□□□□ -2.11
PTCD3-205ENST00000464541 BAGE3Q86Y29 109 aa1.86□□□□□ -2.11
PTCD3-205ENST00000464541 LINC00208Q96KT6 92 aa1.86□□□□□ -2.11
PTCD3-205ENST00000464541 SMCO4Q9NRQ5 59 aa1.86□□□□□ -2.11
PTCD3-205ENST00000464541 ARL2-SNX15V9GYD0 113 aa1.86□□□□□ -2.11
PTCD3-205ENST00000464541 SHROOM2Q13796 1616 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms