RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 DAND5Q8N907 189 aa10.03□□□□□ -0.8
PTPRE-204ENST00000455661 FAM236AA0A1B0GUQ0 79 aa10.02□□□□□ -0.8
PTPRE-204ENST00000455661 FAM236BA0A1B0GV22 79 aa10.02□□□□□ -0.8
PTPRE-204ENST00000455661 PROK1P58294 105 aa10.02□□□□□ -0.81
PTPRE-204ENST00000455661 COPS9Q8WXC6 57 aa10.02□□□□□ -0.81
PTPRE-204ENST00000455661 DUX5Q96PT3 197 aa10.02□□□□□ -0.81
PTPRE-204ENST00000455661 CHCHD7Q9BUK0 85 aa10.02□□□□□ -0.81
PTPRE-204ENST00000455661 COX7A2LO14548 114 aa10.01□□□□□ -0.81
PTPRE-204ENST00000455661 HTN1P15515 57 aa10.01□□□□□ -0.81
PTPRE-204ENST00000455661 LINC01587Q99440 93 aa10.01□□□□□ -0.81
PTPRE-204ENST00000455661 CITED2Q99967 270 aaPredicted RBP10.01□□□□□ -0.81
PTPRE-204ENST00000455661 SPTBN1Q01082 2364 aaKnown RBP10.01□□□□□ -0.81
PTPRE-204ENST00000455661 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.01□□□□□ -0.81
PTPRE-204ENST00000455661 IGKV2-29A2NJV5 120 aaPredicted RBP10.01□□□□□ -0.81
PTPRE-204ENST00000455661 SVEP1Q4LDE5 3571 aa10.01□□□□□ -0.81
PTPRE-204ENST00000455661 HRNRQ86YZ3 2850 aaPredicted RBP10.01□□□□□ -0.81
PTPRE-204ENST00000455661 IGHV4-38-2P0DP08 117 aa10□□□□□ -0.81
PTPRE-204ENST00000455661 TIRAPP58753 221 aa10□□□□□ -0.81
PTPRE-204ENST00000455661 CFHR3Q02985 330 aa10□□□□□ -0.81
PTPRE-204ENST00000455661 KLRB1Q12918 225 aa10□□□□□ -0.81
PTPRE-204ENST00000455661 LINC00643Q86TS7 51 aa10□□□□□ -0.81
PTPRE-204ENST00000455661 LINC00308Q8TCZ7 52 aa10□□□□□ -0.81
PTPRE-204ENST00000455661 RNF152Q8N8N0 203 aa10□□□□□ -0.81
PTPRE-204ENST00000455661 CDKN2A-AS1Q9UH64 79 aa10□□□□□ -0.81
PTPRE-204ENST00000455661 OXLD1Q5BKU9 147 aa9.99□□□□□ -0.81
PTPRE-204ENST00000455661 LINC00467Q9BRT7 94 aa9.99□□□□□ -0.81
PTPRE-204ENST00000455661 KNCNA6PVL3 124 aa9.98□□□□□ -0.81
PTPRE-204ENST00000455661 DGAT2L7PQ6IED9 249 aa9.98□□□□□ -0.81
PTPRE-204ENST00000455661 C3orf56Q8N813 242 aa9.98□□□□□ -0.81
PTPRE-204ENST00000455661 TLN1Q9Y490 2541 aaKnown RBP9.98□□□□□ -0.81
PTPRE-204ENST00000455661 IGLV5-45A0A087WSX0 123 aa9.98□□□□□ -0.81
PTPRE-204ENST00000455661 LY6DQ14210 128 aa9.98□□□□□ -0.81
PTPRE-204ENST00000455661 ATP5G1P05496 136 aa9.97□□□□□ -0.81
PTPRE-204ENST00000455661 C9orf153Q5TBE3 101 aa9.97□□□□□ -0.81
PTPRE-204ENST00000455661 C3orf22Q8N5N4 141 aa9.97□□□□□ -0.81
PTPRE-204ENST00000455661 DNAJC30Q96LL9 226 aa9.97□□□□□ -0.81
PTPRE-204ENST00000455661 Q9H8V8 135 aa9.97□□□□□ -0.81
PTPRE-204ENST00000455661 TRACP01848 142 aa9.96□□□□□ -0.81
PTPRE-204ENST00000455661 PSMB8P28062 276 aa9.96□□□□□ -0.81
PTPRE-204ENST00000455661 DAZ2Q13117 558 aaKnown RBP9.96□□□□□ -0.81
PTPRE-204ENST00000455661 DAZ4Q86SG3 579 aaKnown RBP9.96□□□□□ -0.81
PTPRE-204ENST00000455661 DAZ3Q9NR90 486 aaKnown RBP9.96□□□□□ -0.81
PTPRE-204ENST00000455661 RBMY1A1P0DJD3 496 aaKnown RBP9.96□□□□□ -0.82
PTPRE-204ENST00000455661 RBMY1CP0DJD4 496 aa9.96□□□□□ -0.82
PTPRE-204ENST00000455661 RBMY1FQ15415 496 aaKnown RBP9.96□□□□□ -0.82
PTPRE-204ENST00000455661 PIK3CD-AS1Q5SR53 167 aa9.96□□□□□ -0.82
PTPRE-204ENST00000455661 PIMREGQ9BSJ6 248 aa9.96□□□□□ -0.82
PTPRE-204ENST00000455661 UQCRQO14949 82 aa9.95□□□□□ -0.82
PTPRE-204ENST00000455661 BAALC-AS2P0C853 105 aa9.95□□□□□ -0.82
PTPRE-204ENST00000455661 HERVK_113P63121 156 aa9.95□□□□□ -0.82
PTPRE-204ENST00000455661 ZNF415Q09FC8 603 aa9.95□□□□□ -0.82
PTPRE-204ENST00000455661 SMCR5Q8TEV8 140 aa9.95□□□□□ -0.82
PTPRE-204ENST00000455661 PTPRZ1P23471 2315 aaPredicted RBP9.95□□□□□ -0.82
PTPRE-204ENST00000455661 IGHV3-38A0A0C4DH36 116 aa9.95□□□□□ -0.82
PTPRE-204ENST00000455661 A0A0U1RRA0 63 aa9.95□□□□□ -0.82
PTPRE-204ENST00000455661 SYNJ2BPP57105 145 aa9.95□□□□□ -0.82
PTPRE-204ENST00000455661 TMEM95Q3KNT9 176 aa9.95□□□□□ -0.82
PTPRE-204ENST00000455661 Q6ZSN1 163 aa9.95□□□□□ -0.82
PTPRE-204ENST00000455661 ZNF625Q96I27 306 aaPredicted RBP9.95□□□□□ -0.82
PTPRE-204ENST00000455661 PEMTQ9UBM1 199 aa9.95□□□□□ -0.82
PTPRE-204ENST00000455661 Q9UF83 564 aa9.95□□□□□ -0.82
PTPRE-204ENST00000455661 ZNF292O60281 2723 aa9.94□□□□□ -0.82
PTPRE-204ENST00000455661 CXCL5P42830 114 aa9.94□□□□□ -0.82
PTPRE-204ENST00000455661 PRORYQ9H606 182 aa9.94□□□□□ -0.82
PTPRE-204ENST00000455661 IGHV4-61A0A0C4DH41 118 aa9.94□□□□□ -0.82
PTPRE-204ENST00000455661 INAFM2P0DMQ5 153 aa9.94□□□□□ -0.82
PTPRE-204ENST00000455661 VPREB3Q9UKI3 123 aa9.94□□□□□ -0.82
PTPRE-204ENST00000455661 COL6A6A6NMZ7 2263 aa9.94□□□□□ -0.82
PTPRE-204ENST00000455661 IGLV5-39A0A0G2JS06 123 aa9.93□□□□□ -0.82
PTPRE-204ENST00000455661 NDUFA7O95182 113 aa9.93□□□□□ -0.82
PTPRE-204ENST00000455661 COX6A2Q02221 97 aa9.93□□□□□ -0.82
PTPRE-204ENST00000455661 ASH1LQ9NR48 2969 aaKnown RBP9.93□□□□□ -0.82
PTPRE-204ENST00000455661 TMEM89A2RUT3 159 aa9.93□□□□□ -0.82
PTPRE-204ENST00000455661 IGHV3-53P01767 116 aa9.93□□□□□ -0.82
PTPRE-204ENST00000455661 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.93□□□□□ -0.82
PTPRE-204ENST00000455661 RIF1Q5UIP0 2472 aaKnown RBP9.92□□□□□ -0.82
PTPRE-204ENST00000455661 SDIM1Q6ZPB5 146 aa9.92□□□□□ -0.82
PTPRE-204ENST00000455661 Q8N2B8 174 aa9.92□□□□□ -0.82
PTPRE-204ENST00000455661 LINC00526Q96FQ7 95 aa9.92□□□□□ -0.82
PTPRE-204ENST00000455661 RELNP78509 3460 aa9.92□□□□□ -0.82
PTPRE-204ENST00000455661 PRIMA1Q86XR5 153 aa9.91□□□□□ -0.82
PTPRE-204ENST00000455661 ZFHX3Q15911 3703 aa9.91□□□□□ -0.82
PTPRE-204ENST00000455661 BEAN1Q3B7T3 259 aa9.91□□□□□ -0.82
PTPRE-204ENST00000455661 FAM222AQ5U5X8 452 aa9.91□□□□□ -0.82
PTPRE-204ENST00000455661 SOSTDC1Q6X4U4 206 aa9.91□□□□□ -0.82
PTPRE-204ENST00000455661 PTPRQQ9UMZ3 2332 aa9.91□□□□□ -0.82
PTPRE-204ENST00000455661 SPTA1P02549 2419 aa9.9□□□□□ -0.82
PTPRE-204ENST00000455661 IGHV3OR16-12A0A075B7B8 117 aa9.9□□□□□ -0.82
PTPRE-204ENST00000455661 LINC00242Q5T6M2 205 aa9.9□□□□□ -0.82
PTPRE-204ENST00000455661 C10orf99Q6UWK7 81 aa9.9□□□□□ -0.82
PTPRE-204ENST00000455661 C5orf38Q86SI9 138 aa9.9□□□□□ -0.82
PTPRE-204ENST00000455661 DOPEY2Q9Y3R5 2298 aa9.9□□□□□ -0.82
PTPRE-204ENST00000455661 TTC28Q96AY4 2481 aa9.9□□□□□ -0.82
PTPRE-204ENST00000455661 PRM2P04554 102 aa9.9□□□□□ -0.82
PTPRE-204ENST00000455661 LINC00694P0DN24 101 aa9.9□□□□□ -0.82
PTPRE-204ENST00000455661 DEFB131AP59861 70 aa9.9□□□□□ -0.82
PTPRE-204ENST00000455661 GAGE2AQ6NT46 116 aa9.9□□□□□ -0.82
PTPRE-204ENST00000455661 PPDPFQ9H3Y8 114 aa9.9□□□□□ -0.82
PTPRE-204ENST00000455661 SMIM1B2RUZ4 78 aa9.89□□□□□ -0.83
PTPRE-204ENST00000455661 UCNP55089 124 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms