RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 SPTBN1Q01082 2364 aaKnown RBP5.92□□□□□ -1.46
RIF1-205ENST00000444746 UTRNP46939 3433 aa5.92□□□□□ -1.46
RIF1-205ENST00000444746 IGLV4-3A0A075B6K6 122 aa5.92□□□□□ -1.46
RIF1-205ENST00000444746 DENND4AQ7Z401 1863 aa5.92□□□□□ -1.46
RIF1-205ENST00000444746 TRBV10-1A0A0K0K1A3 114 aa5.92□□□□□ -1.46
RIF1-205ENST00000444746 ZNF22P17026 224 aaPredicted RBP5.92□□□□□ -1.46
RIF1-205ENST00000444746 MED13Q9UHV7 2174 aa5.91□□□□□ -1.46
RIF1-205ENST00000444746 DEFB131BA0A096LNP1 70 aa5.91□□□□□ -1.46
RIF1-205ENST00000444746 NDUFA11Q86Y39 141 aa5.91□□□□□ -1.46
RIF1-205ENST00000444746 PPDPFQ9H3Y8 114 aa5.91□□□□□ -1.46
RIF1-205ENST00000444746 RNASE3P12724 160 aaKnown RBP5.91□□□□□ -1.46
RIF1-205ENST00000444746 RNF183Q96D59 192 aa5.91□□□□□ -1.46
RIF1-205ENST00000444746 OBSL1O75147 1896 aa5.91□□□□□ -1.46
RIF1-205ENST00000444746 HRCT1Q6UXD1 115 aa5.91□□□□□ -1.46
RIF1-205ENST00000444746 CLUHP3Q96NS8 147 aa5.91□□□□□ -1.46
RIF1-205ENST00000444746 MED13LQ71F56 2210 aa5.9□□□□□ -1.46
RIF1-205ENST00000444746 FAM236AA0A1B0GUQ0 79 aa5.9□□□□□ -1.46
RIF1-205ENST00000444746 FAM236BA0A1B0GV22 79 aa5.9□□□□□ -1.46
RIF1-205ENST00000444746 C5orf47Q569G3 176 aa5.9□□□□□ -1.46
RIF1-205ENST00000444746 M0QY20 66 aa5.9□□□□□ -1.46
RIF1-205ENST00000444746 BRI3O95415 125 aa5.9□□□□□ -1.46
RIF1-205ENST00000444746 PSMB8P28062 276 aa5.9□□□□□ -1.46
RIF1-205ENST00000444746 YPEL4Q96NS1 127 aa5.9□□□□□ -1.46
RIF1-205ENST00000444746 IGKV2-28A0A075B6P5 120 aa5.9□□□□□ -1.47
RIF1-205ENST00000444746 IGKV2D-28P01615 120 aa5.9□□□□□ -1.47
RIF1-205ENST00000444746 Q8N6K4 173 aa5.9□□□□□ -1.47
RIF1-205ENST00000444746 TEX49A0A1B0GTD5 131 aa5.89□□□□□ -1.47
RIF1-205ENST00000444746 CRYGDP07320 174 aa5.89□□□□□ -1.47
RIF1-205ENST00000444746 MED14OSP0DP75 135 aa5.89□□□□□ -1.47
RIF1-205ENST00000444746 NANOS2P60321 138 aaKnown RBP5.89□□□□□ -1.47
RIF1-205ENST00000444746 TMEM223A0PJW6 202 aa5.89□□□□□ -1.47
RIF1-205ENST00000444746 A0A1B0GX51 115 aa5.89□□□□□ -1.47
RIF1-205ENST00000444746 EBI3Q14213 229 aa5.89□□□□□ -1.47
RIF1-205ENST00000444746 RBM3P98179 157 aaKnown RBP5.89□□□□□ -1.47
RIF1-205ENST00000444746 RPL37AP8A6NKH3 93 aa5.89□□□□□ -1.47
RIF1-205ENST00000444746 RNF152Q8N8N0 203 aa5.88□□□□□ -1.47
RIF1-205ENST00000444746 ZNF580Q9UK33 172 aa5.88□□□□□ -1.47
RIF1-205ENST00000444746 ABCA4P78363 2273 aa5.88□□□□□ -1.47
RIF1-205ENST00000444746 NUP210LQ5VU65 1888 aa5.88□□□□□ -1.47
RIF1-205ENST00000444746 DIRC1Q969H9 104 aa5.88□□□□□ -1.47
RIF1-205ENST00000444746 TMEM131Q92545 1883 aa5.88□□□□□ -1.47
RIF1-205ENST00000444746 MIAQ16674 131 aa5.88□□□□□ -1.47
RIF1-205ENST00000444746 FAM19A1Q7Z5A9 133 aa5.88□□□□□ -1.47
RIF1-205ENST00000444746 GTF3C1Q12789 2109 aa5.88□□□□□ -1.47
RIF1-205ENST00000444746 A0A0J9YWU9 116 aa5.88□□□□□ -1.47
RIF1-205ENST00000444746 TRBV10-2A0A0K0K1G8 114 aa5.88□□□□□ -1.47
RIF1-205ENST00000444746 TSHBP01222 138 aa5.88□□□□□ -1.47
RIF1-205ENST00000444746 TMEM89A2RUT3 159 aa5.88□□□□□ -1.47
RIF1-205ENST00000444746 NREPQ16612 68 aa5.88□□□□□ -1.47
RIF1-205ENST00000444746 SDIM1Q6ZPB5 146 aa5.88□□□□□ -1.47
RIF1-205ENST00000444746 WFDC9Q8NEX5 89 aa5.88□□□□□ -1.47
RIF1-205ENST00000444746 EML6Q6ZMW3 1958 aa5.88□□□□□ -1.47
RIF1-205ENST00000444746 TRAV23DV6A0A075B6W5 121 aa5.87□□□□□ -1.47
RIF1-205ENST00000444746 MT-ATP8P03928 68 aa5.87□□□□□ -1.47
RIF1-205ENST00000444746 ABCA1O95477 2261 aa5.87□□□□□ -1.47
RIF1-205ENST00000444746 LRRC75A-AS1Q8N1F1 130 aa5.87□□□□□ -1.47
RIF1-205ENST00000444746 A0A0B4J2C4 111 aa5.87□□□□□ -1.47
RIF1-205ENST00000444746 H0Y9J4 135 aa5.87□□□□□ -1.47
RIF1-205ENST00000444746 ARHGAP21Q5T5U3 1957 aa5.87□□□□□ -1.47
RIF1-205ENST00000444746 SPTAN1Q13813 2472 aaKnown RBP5.87□□□□□ -1.47
RIF1-205ENST00000444746 C10orf142B7Z368 130 aa5.87□□□□□ -1.47
RIF1-205ENST00000444746 DOCK11Q5JSL3 2073 aa5.86□□□□□ -1.47
RIF1-205ENST00000444746 C9orf116Q5BN46 136 aaPredicted RBP5.86□□□□□ -1.47
RIF1-205ENST00000444746 URB1-AS1Q96HZ7 61 aa5.86□□□□□ -1.47
RIF1-205ENST00000444746 TNRC6AQ8NDV7 1962 aaKnown RBP5.86□□□□□ -1.47
RIF1-205ENST00000444746 NRACQ8N912 160 aa5.86□□□□□ -1.47
RIF1-205ENST00000444746 HIGD1BQ9P298 99 aa5.86□□□□□ -1.47
RIF1-205ENST00000444746 TRBV6-8A0A0A6YYG3 113 aa5.86□□□□□ -1.47
RIF1-205ENST00000444746 PCDH15Q96QU1 1955 aa5.86□□□□□ -1.47
RIF1-205ENST00000444746 A0A087WZ39 114 aa5.86□□□□□ -1.47
RIF1-205ENST00000444746 TRIAP1O43715 76 aa5.86□□□□□ -1.47
RIF1-205ENST00000444746 COX7BP24311 80 aa5.86□□□□□ -1.47
RIF1-205ENST00000444746 TEN1Q86WV5 123 aa5.86□□□□□ -1.47
RIF1-205ENST00000444746 LINC00310P59036 64 aa5.85□□□□□ -1.47
RIF1-205ENST00000444746 MUC22E2RYF6 1773 aaPredicted RBP5.85□□□□□ -1.47
RIF1-205ENST00000444746 PSMG3-AS1Q96PY0 264 aa5.85□□□□□ -1.47
RIF1-205ENST00000444746 PRR3P79522 188 aaKnown RBP5.85□□□□□ -1.47
RIF1-205ENST00000444746 G3V4G9 280 aa5.85□□□□□ -1.47
RIF1-205ENST00000444746 Q6ZSN1 163 aa5.85□□□□□ -1.47
RIF1-205ENST00000444746 SMIM20Q8N5G0 67 aa5.85□□□□□ -1.47
RIF1-205ENST00000444746 RBX1P62877 108 aa5.84□□□□□ -1.47
RIF1-205ENST00000444746 KIAA1549LQ6ZVL6 1849 aa5.84□□□□□ -1.47
RIF1-205ENST00000444746 IGLV1-40P01703 118 aa5.84□□□□□ -1.47
RIF1-205ENST00000444746 LINC00308Q8TCZ7 52 aa5.84□□□□□ -1.47
RIF1-205ENST00000444746 FUSP35637 526 aaKnown RBP eCLIP5.84□□□□□ -1.47
RIF1-205ENST00000444746 CUL9Q8IWT3 2517 aa5.84□□□□□ -1.47
RIF1-205ENST00000444746 H0YGX0 51 aa5.84□□□□□ -1.47
RIF1-205ENST00000444746 INSL3P51460 131 aa5.84□□□□□ -1.47
RIF1-205ENST00000444746 COX6A2Q02221 97 aa5.84□□□□□ -1.48
RIF1-205ENST00000444746 C3orf84H3BNL1 204 aa5.83□□□□□ -1.48
RIF1-205ENST00000444746 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.83□□□□□ -1.481e-6■■■■■ 44.1
RIF1-205ENST00000444746 C6orf99Q4VX62 202 aa5.83□□□□□ -1.48
RIF1-205ENST00000444746 POM121L12Q8N7R1 296 aa5.83□□□□□ -1.48
RIF1-205ENST00000444746 LINC00694P0DN24 101 aa5.83□□□□□ -1.48
RIF1-205ENST00000444746 U3KQK5 164 aa5.83□□□□□ -1.48
RIF1-205ENST00000444746 ALPK3Q96L96 1907 aa5.83□□□□□ -1.48
RIF1-205ENST00000444746 LY6G6CO95867 125 aa5.83□□□□□ -1.48
RIF1-205ENST00000444746 UBE2D4Q9Y2X8 147 aa5.83□□□□□ -1.48
RIF1-205ENST00000444746 KLK5Q9Y337 293 aaPredicted RBP5.83□□□□□ -1.48
RIF1-205ENST00000444746 NCKAP5O14513 1909 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms