RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SPANXN1Q5VSR9 72 aa5.37□□□□□ -1.55
CDC42BPA-208ENST00000442054 NEXN-AS1Q8NBZ9 246 aa5.37□□□□□ -1.55
CDC42BPA-208ENST00000442054 E9PLD3 99 aa5.36□□□□□ -1.55
CDC42BPA-208ENST00000442054 VAMP3Q15836 100 aa5.36□□□□□ -1.55
CDC42BPA-208ENST00000442054 TOMM6Q96B49 74 aa5.36□□□□□ -1.55
CDC42BPA-208ENST00000442054 MAP1LC3AQ9H492 121 aa5.36□□□□□ -1.55
CDC42BPA-208ENST00000442054 A0A087WX48 190 aa5.36□□□□□ -1.55
CDC42BPA-208ENST00000442054 TRAV26-2A0A0B4J265 109 aa5.36□□□□□ -1.55
CDC42BPA-208ENST00000442054 RNASE3P12724 160 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-208ENST00000442054 SMIM9A6NGZ8 99 aa5.36□□□□□ -1.55
CDC42BPA-208ENST00000442054 MED14OSP0DP75 135 aa5.36□□□□□ -1.55
CDC42BPA-208ENST00000442054 SCGB1A1P11684 91 aa5.36□□□□□ -1.55
CDC42BPA-208ENST00000442054 M0R2N4 97 aa5.35□□□□□ -1.55
CDC42BPA-208ENST00000442054 PSCAO43653 123 aa5.35□□□□□ -1.55
CDC42BPA-208ENST00000442054 KPRPQ5T749 579 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-208ENST00000442054 AMELXQ99217 191 aa5.35□□□□□ -1.55
CDC42BPA-208ENST00000442054 PRSS29PA6NIE9 313 aa5.35□□□□□ -1.55
CDC42BPA-208ENST00000442054 IGKCP01834 107 aa5.35□□□□□ -1.55
CDC42BPA-208ENST00000442054 RPL32P62910 135 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-208ENST00000442054 MRPL35Q9NZE8 188 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-208ENST00000442054 TP53TG1Q9Y2A0 90 aa5.35□□□□□ -1.55
CDC42BPA-208ENST00000442054 LCE2DQ5TA82 110 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-208ENST00000442054 CEND1Q8N111 149 aa5.35□□□□□ -1.55
CDC42BPA-208ENST00000442054 OR5A1Q8NGJ0 315 aa5.35□□□□□ -1.55
CDC42BPA-208ENST00000442054 FAM104AQ969W3 186 aa5.35□□□□□ -1.55
CDC42BPA-208ENST00000442054 C16orf74Q96GX8 76 aa5.35□□□□□ -1.55
CDC42BPA-208ENST00000442054 OVOL2Q9BRP0 275 aa5.35□□□□□ -1.55
CDC42BPA-208ENST00000442054 CHAC1Q9BUX1 264 aa5.35□□□□□ -1.55
CDC42BPA-208ENST00000442054 AGRNO00468 2067 aa5.35□□□□□ -1.55
CDC42BPA-208ENST00000442054 A0A096LPF7 62 aa5.34□□□□□ -1.55
CDC42BPA-208ENST00000442054 TRBV7-9A0A0J9YWB2 115 aa5.34□□□□□ -1.55
CDC42BPA-208ENST00000442054 TMEM262E9PQX1 116 aa5.34□□□□□ -1.55
CDC42BPA-208ENST00000442054 M0R381 172 aa5.34□□□□□ -1.55
CDC42BPA-208ENST00000442054 AZU1P20160 251 aa5.34□□□□□ -1.55
CDC42BPA-208ENST00000442054 ASIPP42127 132 aa5.34□□□□□ -1.55
CDC42BPA-208ENST00000442054 TRPT1Q86TN4 253 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-208ENST00000442054 DCANP1Q8TF63 244 aa5.34□□□□□ -1.55
CDC42BPA-208ENST00000442054 MRAP2Q96G30 205 aa5.34□□□□□ -1.55
CDC42BPA-208ENST00000442054 TENM1Q9UKZ4 2725 aa5.34□□□□□ -1.55
CDC42BPA-208ENST00000442054 IGLV4-69A0A075B6H9 119 aa5.34□□□□□ -1.55
CDC42BPA-208ENST00000442054 IGHV1OR15-1A0A075B7D0 117 aa5.34□□□□□ -1.55
CDC42BPA-208ENST00000442054 KLLNB2CW77 178 aa5.34□□□□□ -1.55
CDC42BPA-208ENST00000442054 PAX4O43316 350 aa5.34□□□□□ -1.55
CDC42BPA-208ENST00000442054 MGPP08493 103 aa5.34□□□□□ -1.55
CDC42BPA-208ENST00000442054 LAGE3Q14657 143 aa5.34□□□□□ -1.55
CDC42BPA-208ENST00000442054 H3BUT2 72 aa5.34□□□□□ -1.56
CDC42BPA-208ENST00000442054 ATP5LO75964 103 aa5.34□□□□□ -1.56
CDC42BPA-208ENST00000442054 PRADC1Q9BSG0 188 aa5.34□□□□□ -1.56
CDC42BPA-208ENST00000442054 SMIM2Q9BVW6 85 aa5.34□□□□□ -1.56
CDC42BPA-208ENST00000442054 IGHV3-73A0A0B4J1V6 119 aa5.33□□□□□ -1.56
CDC42BPA-208ENST00000442054 TAL2Q16559 108 aa5.33□□□□□ -1.56
CDC42BPA-208ENST00000442054 C1orf43Q9BWL3 253 aa5.33□□□□□ -1.56
CDC42BPA-208ENST00000442054 A6NDN8 102 aa5.33□□□□□ -1.56
CDC42BPA-208ENST00000442054 K7EMI3 77 aa5.33□□□□□ -1.56
CDC42BPA-208ENST00000442054 DPM2O94777 84 aa5.33□□□□□ -1.56
CDC42BPA-208ENST00000442054 Q6ZTC4 211 aa5.33□□□□□ -1.56
CDC42BPA-208ENST00000442054 C20orf78Q9BR46 151 aa5.33□□□□□ -1.56
CDC42BPA-208ENST00000442054 NAA38Q9BRA0 125 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-208ENST00000442054 C19orf73Q9NVV2 129 aa5.33□□□□□ -1.56
CDC42BPA-208ENST00000442054 IGIPA6NJ69 53 aa5.33□□□□□ -1.56
CDC42BPA-208ENST00000442054 K7ERJ3 54 aa5.33□□□□□ -1.56
CDC42BPA-208ENST00000442054 TSPAN13O95857 204 aa5.33□□□□□ -1.56
CDC42BPA-208ENST00000442054 ZNF56Q15929 161 aa5.33□□□□□ -1.56
CDC42BPA-208ENST00000442054 CEMP1Q6PRD7 247 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-208ENST00000442054 MRPL16Q9NX20 251 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-208ENST00000442054 EIF4EBP3O60516 100 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-208ENST00000442054 ZC2HC1BQ5TFG8 222 aa5.32□□□□□ -1.56
CDC42BPA-208ENST00000442054 DPH3Q96FX2 82 aa5.32□□□□□ -1.56
CDC42BPA-208ENST00000442054 FBN3Q75N90 2809 aa5.32□□□□□ -1.56
CDC42BPA-208ENST00000442054 GAGE10A6NGK3 116 aa5.32□□□□□ -1.56
CDC42BPA-208ENST00000442054 POLR2KP53803 58 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-208ENST00000442054 TCTAP57738 103 aa5.32□□□□□ -1.56
CDC42BPA-208ENST00000442054 ZNF876PQ49A33 203 aa5.32□□□□□ -1.56
CDC42BPA-208ENST00000442054 BAALCQ8WXS3 180 aa5.32□□□□□ -1.56
CDC42BPA-208ENST00000442054 TM2D3Q9BRN9 247 aa5.32□□□□□ -1.56
CDC42BPA-208ENST00000442054 RPL39LQ96EH5 51 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-208ENST00000442054 IGHV3-16A0A0C4DH30 117 aa5.31□□□□□ -1.56
CDC42BPA-208ENST00000442054 P0DMU3 169 aa5.31□□□□□ -1.56
CDC42BPA-208ENST00000442054 FAM231AP0DMU4 169 aa5.31□□□□□ -1.56
CDC42BPA-208ENST00000442054 FAM231CP0DMU5 169 aa5.31□□□□□ -1.56
CDC42BPA-208ENST00000442054 NMUP48645 174 aa5.31□□□□□ -1.56
CDC42BPA-208ENST00000442054 UBE2D1P51668 147 aa5.31□□□□□ -1.56
CDC42BPA-208ENST00000442054 SPANXB1Q9NS25 103 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-208ENST00000442054 F8VRH5 84 aa5.31□□□□□ -1.56
CDC42BPA-208ENST00000442054 LYRM9A8MSI8 78 aa5.31□□□□□ -1.56
CDC42BPA-208ENST00000442054 PLNP26678 52 aa5.31□□□□□ -1.56
CDC42BPA-208ENST00000442054 SMCPP49901 116 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-208ENST00000442054 TMEM263Q8WUH6 116 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-208ENST00000442054 KRTAP3-3Q9BYR6 98 aa5.31□□□□□ -1.56
CDC42BPA-208ENST00000442054 KRTAP3-2Q9BYR7 98 aa5.31□□□□□ -1.56
CDC42BPA-208ENST00000442054 H3BVH4 76 aa5.3□□□□□ -1.56
CDC42BPA-208ENST00000442054 SUMO2P61956 95 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-208ENST00000442054 C12orf74Q32Q52 190 aa5.3□□□□□ -1.56
CDC42BPA-208ENST00000442054 DGAT2L7PQ6IED9 249 aa5.3□□□□□ -1.56
CDC42BPA-208ENST00000442054 TRAV26-1A0A087WT03 109 aa5.3□□□□□ -1.56
CDC42BPA-208ENST00000442054 H7C1H1 209 aa5.3□□□□□ -1.56
CDC42BPA-208ENST00000442054 SMIM13P0DJ93 91 aa5.3□□□□□ -1.56
CDC42BPA-208ENST00000442054 ANXA2RQ3ZCQ2 193 aa5.3□□□□□ -1.56
CDC42BPA-208ENST00000442054 C9orf85Q96MD7 179 aa5.3□□□□□ -1.56
CDC42BPA-208ENST00000442054 A8MZ25 164 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms