RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 CYP4F30PQ9H0H9 118 aa3.34□□□□□ -1.87
HMGB3P9-201ENST00000441799 UBE2D4Q9Y2X8 147 aa3.34□□□□□ -1.87
HMGB3P9-201ENST00000441799 PTPRSQ13332 1948 aa3.34□□□□□ -1.88
HMGB3P9-201ENST00000441799 GTF3C1Q12789 2109 aa3.34□□□□□ -1.88
HMGB3P9-201ENST00000441799 FBN3Q75N90 2809 aa3.34□□□□□ -1.88
HMGB3P9-201ENST00000441799 TMEM30CPA0ZSE6 113 aa3.33□□□□□ -1.88
HMGB3P9-201ENST00000441799 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
HMGB3P9-201ENST00000441799 MIFP14174 115 aa3.33□□□□□ -1.88
HMGB3P9-201ENST00000441799 ZNF32P17041 273 aa3.33□□□□□ -1.88
HMGB3P9-201ENST00000441799 RPS27P42677 84 aaKnown RBP3.33□□□□□ -1.88
HMGB3P9-201ENST00000441799 BSPH1Q075Z2 132 aa3.33□□□□□ -1.88
HMGB3P9-201ENST00000441799 PATE1Q8WXA2 126 aa3.33□□□□□ -1.88
HMGB3P9-201ENST00000441799 FAM104AQ969W3 186 aa3.33□□□□□ -1.88
HMGB3P9-201ENST00000441799 RMI2Q96E14 147 aa3.33□□□□□ -1.88
HMGB3P9-201ENST00000441799 TMEM141Q96I45 108 aa3.33□□□□□ -1.88
HMGB3P9-201ENST00000441799 BPESC1Q9GZL8 116 aa3.33□□□□□ -1.88
HMGB3P9-201ENST00000441799 NDUFA12Q9UI09 145 aa3.33□□□□□ -1.88
HMGB3P9-201ENST00000441799 ITPR3Q14573 2671 aa3.33□□□□□ -1.88
HMGB3P9-201ENST00000441799 ATG2BQ96BY7 2078 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 ZFHX3Q15911 3703 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 IGLV3-12A0A075B6K2 115 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 TRBV30A0A0K0K1B3 111 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 SPTY2D1-AS1A0A0U1RR47 76 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 TMEM223A0PJW6 202 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 C16orf90A8MZG2 172 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 E7EUB6 86 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 K7EQD1 137 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 LEPROTO15243 131 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 ERC2-IT1O76042 136 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 IGHV4-30-4P0DP06 118 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 IGHV1-2P23083 117 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 REG3AQ06141 175 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 FAM229BQ4G0N7 80 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 FAM167A-AS1Q96KT0 104 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 SND1-IT1Q9HBX3 110 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 XAGE1AQ9HD64 81 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 PHLDA3Q9Y5J5 127 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 KIAA1549Q9HCM3 1950 aa3.32□□□□□ -1.88
HMGB3P9-201ENST00000441799 A0A087WYN8 130 aa3.31□□□□□ -1.88
HMGB3P9-201ENST00000441799 IGHV3-16A0A0C4DH30 117 aa3.31□□□□□ -1.88
HMGB3P9-201ENST00000441799 F8WEM9 126 aa3.31□□□□□ -1.88
HMGB3P9-201ENST00000441799 SH2D1AO60880 128 aa3.31□□□□□ -1.88
HMGB3P9-201ENST00000441799 LY6G6DO95868 133 aa3.31□□□□□ -1.88
HMGB3P9-201ENST00000441799 PRB1P04280 392 aa3.31□□□□□ -1.88
HMGB3P9-201ENST00000441799 RPL27AP46776 148 aaKnown RBP3.31□□□□□ -1.88
HMGB3P9-201ENST00000441799 ODF3L2Q3SX64 289 aa3.31□□□□□ -1.88
HMGB3P9-201ENST00000441799 ZNF818PQ6ZRF7 136 aa3.31□□□□□ -1.88
HMGB3P9-201ENST00000441799 Q6ZRP5 223 aa3.31□□□□□ -1.88
HMGB3P9-201ENST00000441799 PRO1854Q9UHT4 67 aa3.31□□□□□ -1.88
HMGB3P9-201ENST00000441799 NF1P21359 2839 aa3.31□□□□□ -1.88
HMGB3P9-201ENST00000441799 DOPEY1Q5JWR5 2465 aa3.31□□□□□ -1.88
HMGB3P9-201ENST00000441799 NOTCH2Q04721 2471 aa3.3□□□□□ -1.88
HMGB3P9-201ENST00000441799 SPTAN1Q13813 2472 aaKnown RBP3.3□□□□□ -1.88
HMGB3P9-201ENST00000441799 IGKV2D-26A0A0A0MRZ7 120 aa3.3□□□□□ -1.88
HMGB3P9-201ENST00000441799 IGHV5-51A0A0C4DH38 117 aa3.3□□□□□ -1.88
HMGB3P9-201ENST00000441799 IGHV4-61A0A0C4DH41 118 aa3.3□□□□□ -1.88
HMGB3P9-201ENST00000441799 H7C423 109 aa3.3□□□□□ -1.88
HMGB3P9-201ENST00000441799 IGHV4-59P01825 116 aa3.3□□□□□ -1.88
HMGB3P9-201ENST00000441799 DEFB133Q30KQ1 61 aa3.3□□□□□ -1.88
HMGB3P9-201ENST00000441799 ZNF826PQ6ZT77 177 aa3.3□□□□□ -1.88
HMGB3P9-201ENST00000441799 DYNAPQ8N1N2 210 aa3.3□□□□□ -1.88
HMGB3P9-201ENST00000441799 Q8N6K4 173 aa3.3□□□□□ -1.88
HMGB3P9-201ENST00000441799 CCL28Q9NRJ3 127 aa3.3□□□□□ -1.88
HMGB3P9-201ENST00000441799 MSRB1Q9NZV6 116 aa3.3□□□□□ -1.88
HMGB3P9-201ENST00000441799 ATMQ13315 3056 aa3.3□□□□□ -1.88
HMGB3P9-201ENST00000441799 DOCK7Q96N67 2140 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 FLNCQ14315 2725 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 TRAV22A0A0B4J277 110 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 IGKV3D-20A0A0C4DH25 116 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 hDV103S1A0JD37 113 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 PINLYPA6NC86 204 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 TMEM14DPA8MWL7 114 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 J3QKU1 62 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 CLPSP04118 112 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 IGKV3-11P04433 115 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 C17orf58Q2M2W7 97 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 ORMDL3Q8N138 153 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 ARHGAP5-AS1Q96IT6 56 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 SCGB3A1Q96QR1 104 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 B9D2Q9BPU9 175 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 DEFB126Q9BYW3 111 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 CDC42SE1Q9NRR8 79 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 CACNA1CQ13936 2221 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 CSMD1Q96PZ7 3565 aa3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 UTP20O75691 2785 aaKnown RBP3.29□□□□□ -1.88
HMGB3P9-201ENST00000441799 MPDZO75970 2070 aa3.28□□□□□ -1.88
HMGB3P9-201ENST00000441799 IGKV3D-11A0A0A0MRZ8 115 aa3.28□□□□□ -1.88
HMGB3P9-201ENST00000441799 HCG22E2RYF7 251 aa3.28□□□□□ -1.88
HMGB3P9-201ENST00000441799 K7EQG2 157 aa3.28□□□□□ -1.88
HMGB3P9-201ENST00000441799 IGLV3-19P01714 112 aa3.28□□□□□ -1.88
HMGB3P9-201ENST00000441799 IGHV3-48P01763 117 aa3.28□□□□□ -1.88
HMGB3P9-201ENST00000441799 IGHV3-33P01772 117 aa3.28□□□□□ -1.88
HMGB3P9-201ENST00000441799 CFC1BP0CG36 223 aa3.28□□□□□ -1.88
HMGB3P9-201ENST00000441799 CFC1P0CG37 223 aa3.28□□□□□ -1.88
HMGB3P9-201ENST00000441799 FXYD4P59646 89 aa3.28□□□□□ -1.88
HMGB3P9-201ENST00000441799 TMEM61Q8N0U2 210 aa3.28□□□□□ -1.88
HMGB3P9-201ENST00000441799 ZNF525Q8N782 197 aa3.28□□□□□ -1.88
HMGB3P9-201ENST00000441799 LINC00574Q9H8X3 128 aa3.28□□□□□ -1.88
HMGB3P9-201ENST00000441799 PSENENQ9NZ42 101 aa3.28□□□□□ -1.88
HMGB3P9-201ENST00000441799 CELA1Q9UNI1 258 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms