RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 NPSP0C0P6 89 aa18.45■□□□□ 0.54
CPNE1-216ENST00000437340 RRN3P1Q2M238 152 aa18.45■□□□□ 0.54
CPNE1-216ENST00000437340 Q6ZTI0 123 aa18.45■□□□□ 0.54
CPNE1-216ENST00000437340 SEC11AP67812 179 aa18.45■□□□□ 0.54
CPNE1-216ENST00000437340 NOP10Q9NPE3 64 aaKnown RBP18.45■□□□□ 0.54
CPNE1-216ENST00000437340 Q9UF83 564 aa18.45■□□□□ 0.54
CPNE1-216ENST00000437340 E9PLD3 99 aa18.44■□□□□ 0.54
CPNE1-216ENST00000437340 OVOL2Q9BRP0 275 aa18.44■□□□□ 0.54
CPNE1-216ENST00000437340 TRBV10-1A0A0K0K1A3 114 aa18.43■□□□□ 0.54
CPNE1-216ENST00000437340 OR11H2Q8NH07 326 aa18.43■□□□□ 0.54
CPNE1-216ENST00000437340 ZNF479Q96JC4 524 aa18.43■□□□□ 0.54
CPNE1-216ENST00000437340 CIDEAO60543 219 aa18.42■□□□□ 0.54
CPNE1-216ENST00000437340 CRYBA4P53673 196 aa18.42■□□□□ 0.54
CPNE1-216ENST00000437340 TTTY13Q9BZ97 58 aa18.42■□□□□ 0.54
CPNE1-216ENST00000437340 ZMAT5Q9UDW3 170 aaKnown RBP18.42■□□□□ 0.54
CPNE1-216ENST00000437340 TRBV25-1A0A075B6N4 114 aa18.42■□□□□ 0.54
CPNE1-216ENST00000437340 C11orf86A6NJI1 115 aa18.42■□□□□ 0.54
CPNE1-216ENST00000437340 ZNF25P17030 456 aaPredicted RBP18.42■□□□□ 0.54
CPNE1-216ENST00000437340 SPATA3Q8NHX4 192 aa18.42■□□□□ 0.54
CPNE1-216ENST00000437340 VWFP04275 2813 aa18.41■□□□□ 0.54
CPNE1-216ENST00000437340 TRAV8-6A0A0B4J262 113 aa18.41■□□□□ 0.54
CPNE1-216ENST00000437340 IGLV4-3A0A075B6K6 122 aa18.4■□□□□ 0.54
CPNE1-216ENST00000437340 COTL1Q14019 142 aa18.4■□□□□ 0.54
CPNE1-216ENST00000437340 CHCHD7Q9BUK0 85 aa18.4■□□□□ 0.54
CPNE1-216ENST00000437340 NFE4Q86UQ8 179 aa18.4■□□□□ 0.54
CPNE1-216ENST00000437340 ORAOV1Q8WV07 137 aa18.4■□□□□ 0.54
CPNE1-216ENST00000437340 COX11Q9Y6N1 276 aa18.4■□□□□ 0.54
CPNE1-216ENST00000437340 K7EQD1 137 aa18.39■□□□□ 0.53
CPNE1-216ENST00000437340 HERVK_113P61574 105 aa18.39■□□□□ 0.53
CPNE1-216ENST00000437340 LINC00469Q8N7U9 141 aa18.39■□□□□ 0.53
CPNE1-216ENST00000437340 MAPKAPK5-AS1Q8N8E1 139 aa18.39■□□□□ 0.53
CPNE1-216ENST00000437340 TRBV7-3A0A075B6L6 115 aa18.38■□□□□ 0.53
CPNE1-216ENST00000437340 OPRPNQ99935 248 aaPredicted RBP18.38■□□□□ 0.53
CPNE1-216ENST00000437340 VCX2Q9H322 139 aa18.38■□□□□ 0.53
CPNE1-216ENST00000437340 SPANXA1Q9NS26 97 aa18.38■□□□□ 0.53
CPNE1-216ENST00000437340 GAGE1Q13065 139 aa18.37■□□□□ 0.53
CPNE1-216ENST00000437340 PRADC1Q9BSG0 188 aa18.37■□□□□ 0.53
CPNE1-216ENST00000437340 CHAC1Q9BUX1 264 aa18.37■□□□□ 0.53
CPNE1-216ENST00000437340 RPL36AP83881 106 aaKnown RBP18.37■□□□□ 0.53
CPNE1-216ENST00000437340 RPL36ALQ969Q0 106 aaKnown RBP18.37■□□□□ 0.53
CPNE1-216ENST00000437340 ZNRF2Q8NHG8 242 aa18.36■□□□□ 0.53
CPNE1-216ENST00000437340 AMELXQ99217 191 aa18.36■□□□□ 0.53
CPNE1-216ENST00000437340 MYMXA0A1B0GTQ4 84 aa18.35■□□□□ 0.53
CPNE1-216ENST00000437340 EMP1P54849 157 aa18.35■□□□□ 0.53
CPNE1-216ENST00000437340 C3orf56Q8N813 242 aa18.35■□□□□ 0.53
CPNE1-216ENST00000437340 A6NDN8 102 aa18.35■□□□□ 0.53
CPNE1-216ENST00000437340 TAX1BP3O14907 124 aa18.35■□□□□ 0.53
CPNE1-216ENST00000437340 PHLDA1Q8WV24 401 aaPredicted RBP18.35■□□□□ 0.53
CPNE1-216ENST00000437340 NOTCH3Q9UM47 2321 aa18.34■□□□□ 0.53
CPNE1-216ENST00000437340 TRRAPQ9Y4A5 3859 aa18.34■□□□□ 0.53
CPNE1-216ENST00000437340 TRGV2A0A075B6R0 118 aa18.34■□□□□ 0.53
CPNE1-216ENST00000437340 DAZ4Q86SG3 579 aaKnown RBP18.34■□□□□ 0.53
CPNE1-216ENST00000437340 WFDC9Q8NEX5 89 aa18.34■□□□□ 0.53
CPNE1-216ENST00000437340 DAZ3Q9NR90 486 aaKnown RBP18.34■□□□□ 0.53
CPNE1-216ENST00000437340 UBE2D4Q9Y2X8 147 aa18.34■□□□□ 0.53
CPNE1-216ENST00000437340 IGHV3-38A0A0C4DH36 116 aa18.33■□□□□ 0.53
CPNE1-216ENST00000437340 GAGE12BA1L429 117 aa18.33■□□□□ 0.53
CPNE1-216ENST00000437340 GAGE7O76087 117 aa18.33■□□□□ 0.53
CPNE1-216ENST00000437340 GAGE12FP0CL80 117 aa18.33■□□□□ 0.53
CPNE1-216ENST00000437340 GAGE12GP0CL81 117 aa18.33■□□□□ 0.53
CPNE1-216ENST00000437340 GAGE12IP0CL82 117 aa18.33■□□□□ 0.53
CPNE1-216ENST00000437340 SLC25A29Q8N8R3 303 aa18.33■□□□□ 0.53
CPNE1-216ENST00000437340 FAM104AQ969W3 186 aa18.33■□□□□ 0.53
CPNE1-216ENST00000437340 STAB1Q9NY15 2570 aa18.33■□□□□ 0.52
CPNE1-216ENST00000437340 TAL2Q16559 108 aa18.32■□□□□ 0.52
CPNE1-216ENST00000437340 TMEM170BQ5T4T1 132 aa18.32■□□□□ 0.52
CPNE1-216ENST00000437340 TRBV6-4A0A1B0GX49 114 aa18.31■□□□□ 0.52
CPNE1-216ENST00000437340 SMIM9A6NGZ8 99 aa18.3■□□□□ 0.52
CPNE1-216ENST00000437340 UBE2D3P61077 147 aa18.3■□□□□ 0.52
CPNE1-216ENST00000437340 UBE2D2P62837 147 aa18.3■□□□□ 0.52
CPNE1-216ENST00000437340 TIMM21Q9BVV7 248 aa18.3■□□□□ 0.52
CPNE1-216ENST00000437340 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.3■□□□□ 0.52
CPNE1-216ENST00000437340 IGKV2-29A2NJV5 120 aaPredicted RBP18.3■□□□□ 0.52
CPNE1-216ENST00000437340 SHISA2Q6UWI4 295 aa18.3■□□□□ 0.52
CPNE1-216ENST00000437340 Q6ZVH6 145 aa18.3■□□□□ 0.52
CPNE1-216ENST00000437340 KIR2DL5BQ8NHK3 375 aa18.29■□□□□ 0.52
CPNE1-216ENST00000437340 WIPF1O43516 503 aa18.28■□□□□ 0.52
CPNE1-216ENST00000437340 TM2D2Q9BX73 214 aa18.28■□□□□ 0.52
CPNE1-216ENST00000437340 MRPS36P82909 103 aaKnown RBP18.27■□□□□ 0.52
CPNE1-216ENST00000437340 CEMP1Q6PRD7 247 aaPredicted RBP18.27■□□□□ 0.52
CPNE1-216ENST00000437340 COL6A5A8TX70 2615 aa18.27■□□□□ 0.52
CPNE1-216ENST00000437340 ZNF815PA8K554 130 aa18.27■□□□□ 0.51
CPNE1-216ENST00000437340 A0A0J9YXV3 536 aa18.26■□□□□ 0.51
CPNE1-216ENST00000437340 TMEM223A0PJW6 202 aa18.26■□□□□ 0.51
CPNE1-216ENST00000437340 H3BRM9 83 aa18.26■□□□□ 0.51
CPNE1-216ENST00000437340 ZNF22P17026 224 aaPredicted RBP18.26■□□□□ 0.51
CPNE1-216ENST00000437340 GCSHP23434 173 aa18.26■□□□□ 0.51
CPNE1-216ENST00000437340 CEND1Q8N111 149 aa18.26■□□□□ 0.51
CPNE1-216ENST00000437340 LINC00612Q8N6U2 182 aa18.26■□□□□ 0.51
CPNE1-216ENST00000437340 X6R8D5 127 aa18.25■□□□□ 0.51
CPNE1-216ENST00000437340 GAGE12JA6NER3 117 aa18.25■□□□□ 0.51
CPNE1-216ENST00000437340 GAGE4Q13068 117 aa18.25■□□□□ 0.51
CPNE1-216ENST00000437340 GAGE5Q13069 117 aa18.25■□□□□ 0.51
CPNE1-216ENST00000437340 GAGE13Q4V321 117 aa18.25■□□□□ 0.51
CPNE1-216ENST00000437340 TRGV4A0A0C4DH28 118 aa18.24■□□□□ 0.51
CPNE1-216ENST00000437340 APOC4P55056 127 aa18.24■□□□□ 0.51
CPNE1-216ENST00000437340 GTSF1LQ9H1H1 148 aa18.24■□□□□ 0.51
CPNE1-216ENST00000437340 FXYD2P54710 66 aa18.22■□□□□ 0.51
CPNE1-216ENST00000437340 FHL2Q14192 279 aa18.22■□□□□ 0.51
CPNE1-216ENST00000437340 CSDC2Q9Y534 153 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms