RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 MPV17L2Q567V2 206 aa13.71□□□□□ -0.21
HSPG2-205ENST00000427897 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.7□□□□□ -0.22
HSPG2-205ENST00000427897 ATRAIDQ6UW56 229 aa13.7□□□□□ -0.22
HSPG2-205ENST00000427897 NTM-AS1Q6ZSK4 140 aa13.7□□□□□ -0.22
HSPG2-205ENST00000427897 Q8N976 141 aa13.7□□□□□ -0.22
HSPG2-205ENST00000427897 NUP35Q8NFH5 326 aa13.7□□□□□ -0.22
HSPG2-205ENST00000427897 KRTAP4-5Q9BYR2 181 aa13.7□□□□□ -0.22
HSPG2-205ENST00000427897 RIGQ13278 110 aa13.68□□□□□ -0.22
HSPG2-205ENST00000427897 WFDC2Q14508 124 aa13.68□□□□□ -0.22
HSPG2-205ENST00000427897 CTDSP1Q9GZU7 261 aa13.68□□□□□ -0.22
HSPG2-205ENST00000427897 EPM2AB3EWF7 344 aa13.67□□□□□ -0.22
HSPG2-205ENST00000427897 UBE2L6O14933 153 aa13.67□□□□□ -0.22
HSPG2-205ENST00000427897 XGP55808 180 aa13.67□□□□□ -0.22
HSPG2-205ENST00000427897 IQCJQ1A5X6 159 aa13.67□□□□□ -0.22
HSPG2-205ENST00000427897 A0A1B0GW15 77 aa13.66□□□□□ -0.22
HSPG2-205ENST00000427897 RBX1P62877 108 aa13.66□□□□□ -0.22
HSPG2-205ENST00000427897 COTL1Q14019 142 aa13.66□□□□□ -0.22
HSPG2-205ENST00000427897 ENHOQ6UWT2 76 aa13.66□□□□□ -0.22
HSPG2-205ENST00000427897 TMEM243Q9BU79 118 aa13.66□□□□□ -0.22
HSPG2-205ENST00000427897 TMEM70Q9BUB7 260 aa13.66□□□□□ -0.22
HSPG2-205ENST00000427897 RHEBQ15382 184 aa13.65□□□□□ -0.22
HSPG2-205ENST00000427897 MIAQ16674 131 aa13.65□□□□□ -0.22
HSPG2-205ENST00000427897 FRZBQ92765 325 aa13.65□□□□□ -0.22
HSPG2-205ENST00000427897 RYR1P21817 5038 aa13.65□□□□□ -0.22
HSPG2-205ENST00000427897 LRP1BQ9NZR2 4599 aa13.64□□□□□ -0.23
HSPG2-205ENST00000427897 APOC3P02656 99 aa13.64□□□□□ -0.23
HSPG2-205ENST00000427897 S100A8P05109 93 aa13.64□□□□□ -0.23
HSPG2-205ENST00000427897 C14orf177Q52M58 125 aa13.64□□□□□ -0.23
HSPG2-205ENST00000427897 CLPSL2Q6UWE3 100 aa13.64□□□□□ -0.23
HSPG2-205ENST00000427897 LINC00269Q8N2A0 174 aa13.64□□□□□ -0.23
HSPG2-205ENST00000427897 SVBPQ8N300 66 aa13.64□□□□□ -0.23
HSPG2-205ENST00000427897 DEFB104AQ8WTQ1 72 aa13.64□□□□□ -0.23
HSPG2-205ENST00000427897 IMMP2LQ96T52 175 aa13.64□□□□□ -0.23
HSPG2-205ENST00000427897 TRAV26-2A0A0B4J265 109 aa13.63□□□□□ -0.23
HSPG2-205ENST00000427897 HLA-DQA1P01909 254 aa13.63□□□□□ -0.23
HSPG2-205ENST00000427897 AMTP48728 403 aa13.63□□□□□ -0.23
HSPG2-205ENST00000427897 GATD1Q8NB37 220 aa13.63□□□□□ -0.23
HSPG2-205ENST00000427897 CLRN3Q8NCR9 226 aa13.63□□□□□ -0.23
HSPG2-205ENST00000427897 SNAPINO95295 136 aa13.62□□□□□ -0.23
HSPG2-205ENST00000427897 ATP5L2Q7Z4Y8 100 aa13.62□□□□□ -0.23
HSPG2-205ENST00000427897 SLC7A5P1Q8MH63 180 aa13.62□□□□□ -0.23
HSPG2-205ENST00000427897 TMEM191AQ9H0A3 160 aa13.62□□□□□ -0.23
HSPG2-205ENST00000427897 TMEM242Q9NWH2 141 aa13.62□□□□□ -0.23
HSPG2-205ENST00000427897 C7orf77A4D0Y5 90 aa13.61□□□□□ -0.23
HSPG2-205ENST00000427897 SMR3BP02814 79 aaPredicted RBP13.61□□□□□ -0.23
HSPG2-205ENST00000427897 FAM229AH3BQW9 127 aa13.6□□□□□ -0.23
HSPG2-205ENST00000427897 HBBP68871 147 aa13.6□□□□□ -0.23
HSPG2-205ENST00000427897 HAMPP81172 84 aa13.6□□□□□ -0.23
HSPG2-205ENST00000427897 HSPG2P98160 4391 aa13.59□□□□□ -0.23
HSPG2-205ENST00000427897 S100PP25815 95 aa13.59□□□□□ -0.23
HSPG2-205ENST00000427897 REG3AQ06141 175 aa13.59□□□□□ -0.23
HSPG2-205ENST00000427897 MRPL54Q6P161 138 aaKnown RBP13.59□□□□□ -0.23
HSPG2-205ENST00000427897 BTF3L4Q96K17 158 aa13.59□□□□□ -0.23
HSPG2-205ENST00000427897 RPS10P5Q9NQ39 176 aa13.59□□□□□ -0.23
HSPG2-205ENST00000427897 TRAV9-1A0A075B6T8 112 aa13.58□□□□□ -0.24
HSPG2-205ENST00000427897 PMCHP20382 165 aa13.58□□□□□ -0.24
HSPG2-205ENST00000427897 CAMPP49913 170 aa13.58□□□□□ -0.24
HSPG2-205ENST00000427897 RPL39LQ96EH5 51 aaKnown RBP13.58□□□□□ -0.24
HSPG2-205ENST00000427897 PRR34Q9NV39 138 aa13.58□□□□□ -0.24
HSPG2-205ENST00000427897 PCLOQ9Y6V0 5065 aa13.57□□□□□ -0.24
HSPG2-205ENST00000427897 A0A1B0GUV1 79 aa13.57□□□□□ -0.24
HSPG2-205ENST00000427897 AMMECR1LQ6DCA0 310 aa13.57□□□□□ -0.24
HSPG2-205ENST00000427897 DNAH5Q8TE73 4624 aa13.57□□□□□ -0.24
HSPG2-205ENST00000427897 IGLV10-54A0A075B6I4 117 aa13.56□□□□□ -0.24
HSPG2-205ENST00000427897 A0A1B0GXF2 115 aa13.56□□□□□ -0.24
HSPG2-205ENST00000427897 LINC01620Q4KN68 170 aa13.56□□□□□ -0.24
HSPG2-205ENST00000427897 Q5VSD8 79 aa13.56□□□□□ -0.24
HSPG2-205ENST00000427897 TRAV8-4A0A0B4J246 113 aa13.55□□□□□ -0.24
HSPG2-205ENST00000427897 USP17L23D6RBM5 183 aa13.55□□□□□ -0.24
HSPG2-205ENST00000427897 NCR2O95944 276 aa13.55□□□□□ -0.24
HSPG2-205ENST00000427897 APCSP02743 223 aa13.55□□□□□ -0.24
HSPG2-205ENST00000427897 FAM30AQ9NZY2 134 aa13.55□□□□□ -0.24
HSPG2-205ENST00000427897 IGLV4-60A0A075B6I1 120 aa13.54□□□□□ -0.24
HSPG2-205ENST00000427897 SDHAF1A6NFY7 115 aa13.54□□□□□ -0.24
HSPG2-205ENST00000427897 RNASEKQ6P5S7 137 aaKnown RBP13.54□□□□□ -0.24
HSPG2-205ENST00000427897 C20orf203Q8NBC4 194 aa13.54□□□□□ -0.24
HSPG2-205ENST00000427897 MRAP2Q96G30 205 aa13.54□□□□□ -0.24
HSPG2-205ENST00000427897 ST20Q9HBF5 79 aa13.54□□□□□ -0.24
HSPG2-205ENST00000427897 APOBP04114 4563 aaKnown RBP13.53□□□□□ -0.24
HSPG2-205ENST00000427897 I3L3M4 83 aa13.53□□□□□ -0.24
HSPG2-205ENST00000427897 RAB4AP20338 218 aa13.53□□□□□ -0.24
HSPG2-205ENST00000427897 FAM104BQ5XKR9 115 aa13.53□□□□□ -0.24
HSPG2-205ENST00000427897 AMN1Q8IY45 258 aa13.53□□□□□ -0.24
HSPG2-205ENST00000427897 INAFM2P0DMQ5 153 aa13.52□□□□□ -0.25
HSPG2-205ENST00000427897 RNF185Q96GF1 192 aa13.52□□□□□ -0.25
HSPG2-205ENST00000427897 IGKV3OR2-268A0A0C4DH90 116 aa13.51□□□□□ -0.25
HSPG2-205ENST00000427897 PPP1R17O96001 155 aa13.51□□□□□ -0.25
HSPG2-205ENST00000427897 TMEM101Q96IK0 257 aa13.5□□□□□ -0.25
HSPG2-205ENST00000427897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-205ENST00000427897 IGKV2-29A2NJV5 120 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-205ENST00000427897 H7C423 109 aa13.49□□□□□ -0.25
HSPG2-205ENST00000427897 DGAT2L7PQ6IED9 249 aa13.49□□□□□ -0.25
HSPG2-205ENST00000427897 TRBV6-5A0A0K0K1A5 114 aa13.48□□□□□ -0.25
HSPG2-205ENST00000427897 MRPL51Q4U2R6 128 aaKnown RBP13.48□□□□□ -0.25
HSPG2-205ENST00000427897 PPBPP02775 128 aa13.47□□□□□ -0.25
HSPG2-205ENST00000427897 PRSS1P07477 247 aa13.47□□□□□ -0.25
HSPG2-205ENST00000427897 CKS2P33552 79 aa13.47□□□□□ -0.25
HSPG2-205ENST00000427897 COX19Q49B96 90 aa13.47□□□□□ -0.25
HSPG2-205ENST00000427897 Q6ZSA8 131 aa13.47□□□□□ -0.25
HSPG2-205ENST00000427897 AP5S1Q9NUS5 200 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms