RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 C12orf54Q6X4T0 127 aa8.77□□□□□ -1.01
CLIP4-203ENST00000401617 TRBV10-1A0A0K0K1A3 114 aa8.76□□□□□ -1.01
CLIP4-203ENST00000401617 CIDEAO60543 219 aa8.76□□□□□ -1.01
CLIP4-203ENST00000401617 PAPPA-AS1Q5QFB9 102 aa8.76□□□□□ -1.01
CLIP4-203ENST00000401617 BVES-AS1Q5T3Y7 98 aa8.76□□□□□ -1.01
CLIP4-203ENST00000401617 CHCHD7Q9BUK0 85 aa8.76□□□□□ -1.01
CLIP4-203ENST00000401617 NPSP0C0P6 89 aa8.76□□□□□ -1.01
CLIP4-203ENST00000401617 FAM104AQ969W3 186 aa8.76□□□□□ -1.01
CLIP4-203ENST00000401617 HIGD1BQ9P298 99 aa8.75□□□□□ -1.01
CLIP4-203ENST00000401617 IGLV4-3A0A075B6K6 122 aa8.75□□□□□ -1.01
CLIP4-203ENST00000401617 C11orf86A6NJI1 115 aa8.75□□□□□ -1.01
CLIP4-203ENST00000401617 K7EQD1 137 aa8.75□□□□□ -1.01
CLIP4-203ENST00000401617 CRYBA4P53673 196 aa8.75□□□□□ -1.01
CLIP4-203ENST00000401617 TRRAPQ9Y4A5 3859 aa8.74□□□□□ -1.01
CLIP4-203ENST00000401617 TRBV7-3A0A075B6L6 115 aa8.74□□□□□ -1.01
CLIP4-203ENST00000401617 NFE4Q86UQ8 179 aa8.74□□□□□ -1.01
CLIP4-203ENST00000401617 OPRPNQ99935 248 aaPredicted RBP8.74□□□□□ -1.01
CLIP4-203ENST00000401617 E9PLD3 99 aa8.73□□□□□ -1.01
CLIP4-203ENST00000401617 LINC00612Q8N6U2 182 aa8.73□□□□□ -1.01
CLIP4-203ENST00000401617 KIR2DL5BQ8NHK3 375 aa8.73□□□□□ -1.01
CLIP4-203ENST00000401617 AMELXQ99217 191 aa8.73□□□□□ -1.01
CLIP4-203ENST00000401617 TTTY13Q9BZ97 58 aa8.73□□□□□ -1.01
CLIP4-203ENST00000401617 SMIM9A6NGZ8 99 aa8.73□□□□□ -1.01
CLIP4-203ENST00000401617 COTL1Q14019 142 aa8.73□□□□□ -1.01
CLIP4-203ENST00000401617 TMEM97Q5BJF2 176 aa8.73□□□□□ -1.01
CLIP4-203ENST00000401617 MAPKAPK5-AS1Q8N8E1 139 aa8.73□□□□□ -1.01
CLIP4-203ENST00000401617 SLC25A29Q8N8R3 303 aa8.73□□□□□ -1.01
CLIP4-203ENST00000401617 ZNRF2Q8NHG8 242 aa8.73□□□□□ -1.01
CLIP4-203ENST00000401617 X6R8D5 127 aa8.73□□□□□ -1.01
CLIP4-203ENST00000401617 GAGE12BA1L429 117 aa8.72□□□□□ -1.01
CLIP4-203ENST00000401617 GAGE7O76087 117 aa8.72□□□□□ -1.01
CLIP4-203ENST00000401617 GAGE12FP0CL80 117 aa8.72□□□□□ -1.01
CLIP4-203ENST00000401617 GAGE12GP0CL81 117 aa8.72□□□□□ -1.01
CLIP4-203ENST00000401617 GAGE12IP0CL82 117 aa8.72□□□□□ -1.01
CLIP4-203ENST00000401617 HSD52Q0P140 79 aa8.72□□□□□ -1.01
CLIP4-203ENST00000401617 SPANXA1Q9NS26 97 aa8.72□□□□□ -1.01
CLIP4-203ENST00000401617 TRBV25-1A0A075B6N4 114 aa8.72□□□□□ -1.01
CLIP4-203ENST00000401617 UBE2D3P61077 147 aa8.72□□□□□ -1.01
CLIP4-203ENST00000401617 UBE2D2P62837 147 aa8.72□□□□□ -1.01
CLIP4-203ENST00000401617 RPL36AP83881 106 aaKnown RBP8.72□□□□□ -1.01
CLIP4-203ENST00000401617 KRTAP24-1Q3LI83 254 aa8.72□□□□□ -1.01
CLIP4-203ENST00000401617 PHLDA1Q8WV24 401 aaPredicted RBP8.72□□□□□ -1.01
CLIP4-203ENST00000401617 RPL36ALQ969Q0 106 aaKnown RBP8.72□□□□□ -1.01
CLIP4-203ENST00000401617 UBE2D4Q9Y2X8 147 aa8.72□□□□□ -1.01
CLIP4-203ENST00000401617 TRGV2A0A075B6R0 118 aa8.71□□□□□ -1.01
CLIP4-203ENST00000401617 IGHV3-38A0A0C4DH36 116 aa8.71□□□□□ -1.01
CLIP4-203ENST00000401617 TRBV6-4A0A1B0GX49 114 aa8.71□□□□□ -1.01
CLIP4-203ENST00000401617 DAZ4Q86SG3 579 aaKnown RBP8.71□□□□□ -1.01
CLIP4-203ENST00000401617 VCX2Q9H322 139 aa8.71□□□□□ -1.01
CLIP4-203ENST00000401617 DAZ3Q9NR90 486 aaKnown RBP8.71□□□□□ -1.01
CLIP4-203ENST00000401617 OR11H2Q8NH07 326 aa8.71□□□□□ -1.02
CLIP4-203ENST00000401617 TIMM21Q9BVV7 248 aa8.71□□□□□ -1.02
CLIP4-203ENST00000401617 TRAV8-6A0A0B4J262 113 aa8.7□□□□□ -1.02
CLIP4-203ENST00000401617 EMP1P54849 157 aa8.7□□□□□ -1.02
CLIP4-203ENST00000401617 SEC11AP67812 179 aa8.7□□□□□ -1.02
CLIP4-203ENST00000401617 FHL2Q14192 279 aa8.7□□□□□ -1.02
CLIP4-203ENST00000401617 PRADC1Q9BSG0 188 aa8.7□□□□□ -1.02
CLIP4-203ENST00000401617 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.69□□□□□ -1.02
CLIP4-203ENST00000401617 MYMXA0A1B0GTQ4 84 aa8.69□□□□□ -1.02
CLIP4-203ENST00000401617 IGKV2-29A2NJV5 120 aaPredicted RBP8.69□□□□□ -1.02
CLIP4-203ENST00000401617 APOC4P55056 127 aa8.69□□□□□ -1.02
CLIP4-203ENST00000401617 MRPS36P82909 103 aaKnown RBP8.69□□□□□ -1.02
CLIP4-203ENST00000401617 CEMP1Q6PRD7 247 aaPredicted RBP8.69□□□□□ -1.02
CLIP4-203ENST00000401617 ORAOV1Q8WV07 137 aa8.69□□□□□ -1.02
CLIP4-203ENST00000401617 BAHCC1Q9P281 2608 aa8.68□□□□□ -1.02
CLIP4-203ENST00000401617 CMYA5Q8N3K9 4069 aa8.68□□□□□ -1.02
CLIP4-203ENST00000401617 HERVK_113P61574 105 aa8.68□□□□□ -1.02
CLIP4-203ENST00000401617 NTM-AS1Q6ZSK4 140 aa8.68□□□□□ -1.02
CLIP4-203ENST00000401617 SBSPONQ8IVN8 264 aa8.68□□□□□ -1.02
CLIP4-203ENST00000401617 CHAC1Q9BUX1 264 aa8.68□□□□□ -1.02
CLIP4-203ENST00000401617 LINC00694P0DN24 101 aa8.68□□□□□ -1.02
CLIP4-203ENST00000401617 GTSF1LQ9H1H1 148 aa8.68□□□□□ -1.02
CLIP4-203ENST00000401617 TRGV4A0A0C4DH28 118 aa8.67□□□□□ -1.02
CLIP4-203ENST00000401617 A0A0J9YXV3 536 aa8.67□□□□□ -1.02
CLIP4-203ENST00000401617 GAGE12JA6NER3 117 aa8.67□□□□□ -1.02
CLIP4-203ENST00000401617 TAX1BP3O14907 124 aa8.67□□□□□ -1.02
CLIP4-203ENST00000401617 ZNF22P17026 224 aaPredicted RBP8.67□□□□□ -1.02
CLIP4-203ENST00000401617 GAGE1Q13065 139 aa8.67□□□□□ -1.02
CLIP4-203ENST00000401617 GAGE4Q13068 117 aa8.67□□□□□ -1.02
CLIP4-203ENST00000401617 GAGE5Q13069 117 aa8.67□□□□□ -1.02
CLIP4-203ENST00000401617 GAGE13Q4V321 117 aa8.67□□□□□ -1.02
CLIP4-203ENST00000401617 TMEM170BQ5T4T1 132 aa8.67□□□□□ -1.02
CLIP4-203ENST00000401617 CSDC2Q9Y534 153 aaKnown RBP8.67□□□□□ -1.02
CLIP4-203ENST00000401617 COX11Q9Y6N1 276 aa8.67□□□□□ -1.02
CLIP4-203ENST00000401617 TMEM223A0PJW6 202 aa8.66□□□□□ -1.02
CLIP4-203ENST00000401617 CYSRT1A8MQ03 144 aa8.66□□□□□ -1.02
CLIP4-203ENST00000401617 ZNF25P17030 456 aaPredicted RBP8.66□□□□□ -1.02
CLIP4-203ENST00000401617 TAL2Q16559 108 aa8.66□□□□□ -1.02
CLIP4-203ENST00000401617 Q6ZUT4 128 aa8.66□□□□□ -1.02
CLIP4-203ENST00000401617 LOC100131303A0A0U1RQF7 123 aa8.65□□□□□ -1.02
CLIP4-203ENST00000401617 LYRM9A8MSI8 78 aa8.65□□□□□ -1.02
CLIP4-203ENST00000401617 TM2D2Q9BX73 214 aa8.65□□□□□ -1.02
CLIP4-203ENST00000401617 DEFB135Q30KP9 77 aa8.65□□□□□ -1.03
CLIP4-203ENST00000401617 Q6ZVH6 145 aa8.65□□□□□ -1.03
CLIP4-203ENST00000401617 TINCRA0A1B0GVN0 87 aa8.64□□□□□ -1.03
CLIP4-203ENST00000401617 DEFB130BP0DP73 79 aa8.64□□□□□ -1.03
CLIP4-203ENST00000401617 DEFB130AP0DP74 79 aa8.64□□□□□ -1.03
CLIP4-203ENST00000401617 TSPEAR-AS2P59090 65 aa8.64□□□□□ -1.03
CLIP4-203ENST00000401617 NBEAL2Q6ZNJ1 2754 aa8.63□□□□□ -1.03
CLIP4-203ENST00000401617 A6NDN8 102 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms