RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 OPRPNQ99935 248 aaPredicted RBP10.39□□□□□ -0.75
SCAF4-202ENST00000399804 DNAJC30Q96LL9 226 aa10.39□□□□□ -0.75
SCAF4-202ENST00000399804 ESM1Q9NQ30 184 aa10.38□□□□□ -0.75
SCAF4-202ENST00000399804 TRBV7-3A0A075B6L6 115 aa10.38□□□□□ -0.75
SCAF4-202ENST00000399804 K7EQD1 137 aa10.38□□□□□ -0.75
SCAF4-202ENST00000399804 C6orf226Q5I0X4 101 aa10.38□□□□□ -0.75
SCAF4-202ENST00000399804 A0A1B0GWB2 263 aa10.38□□□□□ -0.75
SCAF4-202ENST00000399804 CRPP02741 224 aa10.38□□□□□ -0.75
SCAF4-202ENST00000399804 NRACQ8N912 160 aa10.38□□□□□ -0.75
SCAF4-202ENST00000399804 C20orf203Q8NBC4 194 aa10.37□□□□□ -0.75
SCAF4-202ENST00000399804 NDUFA12Q9UI09 145 aa10.37□□□□□ -0.75
SCAF4-202ENST00000399804 IGHV4-4A0A075B6R2 117 aa10.37□□□□□ -0.75
SCAF4-202ENST00000399804 PROK1P58294 105 aa10.37□□□□□ -0.75
SCAF4-202ENST00000399804 ERG28Q9UKR5 140 aa10.37□□□□□ -0.75
SCAF4-202ENST00000399804 CHD6Q8TD26 2715 aa10.37□□□□□ -0.75
SCAF4-202ENST00000399804 SPANXA1Q9NS26 97 aa10.36□□□□□ -0.75
SCAF4-202ENST00000399804 SPINK8P0C7L1 97 aa10.36□□□□□ -0.75
SCAF4-202ENST00000399804 TIMM17AQ99595 171 aa10.36□□□□□ -0.75
SCAF4-202ENST00000399804 PGPEP1Q9NXJ5 209 aa10.36□□□□□ -0.75
SCAF4-202ENST00000399804 TRAV12-1A0A0B4J245 112 aa10.36□□□□□ -0.75
SCAF4-202ENST00000399804 M0QY20 66 aa10.36□□□□□ -0.75
SCAF4-202ENST00000399804 SIVA1O15304 175 aa10.36□□□□□ -0.75
SCAF4-202ENST00000399804 ODF3L2Q3SX64 289 aa10.36□□□□□ -0.75
SCAF4-202ENST00000399804 GYPEP15421 78 aa10.35□□□□□ -0.75
SCAF4-202ENST00000399804 SS18Q15532 418 aa10.35□□□□□ -0.75
SCAF4-202ENST00000399804 CEMP1Q6PRD7 247 aaPredicted RBP10.35□□□□□ -0.75
SCAF4-202ENST00000399804 C11orf86A6NJI1 115 aa10.35□□□□□ -0.75
SCAF4-202ENST00000399804 CKS1BP61024 79 aa10.35□□□□□ -0.75
SCAF4-202ENST00000399804 TACC2O95359 2948 aa10.35□□□□□ -0.75
SCAF4-202ENST00000399804 K7EP13 123 aa10.35□□□□□ -0.75
SCAF4-202ENST00000399804 KALRNO60229 2985 aa10.34□□□□□ -0.75
SCAF4-202ENST00000399804 DAZ2Q13117 558 aaKnown RBP10.34□□□□□ -0.75
SCAF4-202ENST00000399804 DAZ4Q86SG3 579 aaKnown RBP10.34□□□□□ -0.75
SCAF4-202ENST00000399804 LINC00482Q8N8I6 264 aa10.34□□□□□ -0.75
SCAF4-202ENST00000399804 DAZ3Q9NR90 486 aaKnown RBP10.34□□□□□ -0.75
SCAF4-202ENST00000399804 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.34□□□□□ -0.75
SCAF4-202ENST00000399804 CLPSL2Q6UWE3 100 aa10.34□□□□□ -0.75
SCAF4-202ENST00000399804 CRYGDP07320 174 aa10.33□□□□□ -0.76
SCAF4-202ENST00000399804 C9orf85Q96MD7 179 aa10.33□□□□□ -0.76
SCAF4-202ENST00000399804 ATRQ13535 2644 aa10.33□□□□□ -0.76
SCAF4-202ENST00000399804 K7ERJ3 54 aa10.33□□□□□ -0.76
SCAF4-202ENST00000399804 CIDEAO60543 219 aa10.33□□□□□ -0.76
SCAF4-202ENST00000399804 BOD1L2Q8IYS8 172 aa10.33□□□□□ -0.76
SCAF4-202ENST00000399804 HHLA3Q9XRX5 114 aa10.33□□□□□ -0.76
SCAF4-202ENST00000399804 FGF6P10767 208 aa10.33□□□□□ -0.76
SCAF4-202ENST00000399804 HERVK_113P63121 156 aa10.32□□□□□ -0.76
SCAF4-202ENST00000399804 CEND1Q8N111 149 aa10.32□□□□□ -0.76
SCAF4-202ENST00000399804 ATP6V0E2Q8NHE4 81 aa10.32□□□□□ -0.76
SCAF4-202ENST00000399804 CFAP126Q5VTH2 177 aa10.32□□□□□ -0.76
SCAF4-202ENST00000399804 SPART-AS1P0CW21 52 aa10.31□□□□□ -0.76
SCAF4-202ENST00000399804 ANGP03950 147 aaKnown RBP10.31□□□□□ -0.76
SCAF4-202ENST00000399804 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.31□□□□□ -0.76
SCAF4-202ENST00000399804 TRAV4A0A0B4J268 109 aa10.31□□□□□ -0.76
SCAF4-202ENST00000399804 NDUFA7O95182 113 aa10.31□□□□□ -0.76
SCAF4-202ENST00000399804 MRAPQ8TCY5 172 aa10.31□□□□□ -0.76
SCAF4-202ENST00000399804 TRBV10-1A0A0K0K1A3 114 aa10.31□□□□□ -0.76
SCAF4-202ENST00000399804 Q8N2B8 174 aa10.31□□□□□ -0.76
SCAF4-202ENST00000399804 LRBAP50851 2863 aa10.3□□□□□ -0.76
SCAF4-202ENST00000399804 A0A096LNT2 108 aa10.3□□□□□ -0.76
SCAF4-202ENST00000399804 C9orf118A6NHY6 69 aa10.3□□□□□ -0.76
SCAF4-202ENST00000399804 FSHBP01225 129 aa10.3□□□□□ -0.76
SCAF4-202ENST00000399804 ATP5G1P05496 136 aa10.3□□□□□ -0.76
SCAF4-202ENST00000399804 DNAL4O96015 105 aa10.3□□□□□ -0.76
SCAF4-202ENST00000399804 KLK9Q2XQG4 91 aa10.3□□□□□ -0.76
SCAF4-202ENST00000399804 MTURNQ8N3F0 131 aa10.3□□□□□ -0.76
SCAF4-202ENST00000399804 TRBV27A0A0K0K1C4 114 aa10.29□□□□□ -0.76
SCAF4-202ENST00000399804 E9PLD3 99 aa10.29□□□□□ -0.76
SCAF4-202ENST00000399804 POLR2KP53803 58 aaKnown RBP10.29□□□□□ -0.76
SCAF4-202ENST00000399804 TAL2Q16559 108 aa10.29□□□□□ -0.76
SCAF4-202ENST00000399804 PFN2P35080 140 aa10.29□□□□□ -0.76
SCAF4-202ENST00000399804 NEXN-AS1Q8NBZ9 246 aa10.28□□□□□ -0.76
SCAF4-202ENST00000399804 XCL1P47992 114 aa10.28□□□□□ -0.76
SCAF4-202ENST00000399804 C5orf38Q86SI9 138 aa10.28□□□□□ -0.76
SCAF4-202ENST00000399804 TRBV6-5A0A0K0K1A5 114 aa10.28□□□□□ -0.76
SCAF4-202ENST00000399804 FXYD2P54710 66 aa10.27□□□□□ -0.76
SCAF4-202ENST00000399804 C16orf95Q9H693 158 aa10.27□□□□□ -0.76
SCAF4-202ENST00000399804 LEPROTO15243 131 aa10.27□□□□□ -0.77
SCAF4-202ENST00000399804 C12orf74Q32Q52 190 aa10.27□□□□□ -0.77
SCAF4-202ENST00000399804 IGKV2D-26A0A0A0MRZ7 120 aa10.27□□□□□ -0.77
SCAF4-202ENST00000399804 IGLV1-51P01701 117 aa10.27□□□□□ -0.77
SCAF4-202ENST00000399804 FAM222AQ5U5X8 452 aa10.27□□□□□ -0.77
SCAF4-202ENST00000399804 Q6ZUT4 128 aa10.27□□□□□ -0.77
SCAF4-202ENST00000399804 LAMA5O15230 3695 aa10.27□□□□□ -0.77
SCAF4-202ENST00000399804 SLC25A29Q8N8R3 303 aa10.26□□□□□ -0.77
SCAF4-202ENST00000399804 C2orf91Q6ZV80 131 aa10.26□□□□□ -0.77
SCAF4-202ENST00000399804 GTSF1LQ9H1H1 148 aa10.26□□□□□ -0.77
SCAF4-202ENST00000399804 Q9H8V8 135 aa10.26□□□□□ -0.77
SCAF4-202ENST00000399804 LINC00467Q9BRT7 94 aa10.26□□□□□ -0.77
SCAF4-202ENST00000399804 PRO0255Q9UI72 69 aa10.26□□□□□ -0.77
SCAF4-202ENST00000399804 AMTNQ6UX39 209 aa10.25□□□□□ -0.77
SCAF4-202ENST00000399804 TRAV8-3A0A0A6YYJ7 113 aa10.25□□□□□ -0.77
SCAF4-202ENST00000399804 MRPL23Q16540 153 aaKnown RBP10.25□□□□□ -0.77
SCAF4-202ENST00000399804 RBMY1BA6NDE4 496 aaKnown RBP10.25□□□□□ -0.77
SCAF4-202ENST00000399804 RBMY1EA6NEQ0 496 aaKnown RBP10.25□□□□□ -0.77
SCAF4-202ENST00000399804 RS1O15537 224 aa10.25□□□□□ -0.77
SCAF4-202ENST00000399804 RBMY1DP0C7P1 496 aaKnown RBP10.25□□□□□ -0.77
SCAF4-202ENST00000399804 RBMY1A1P0DJD3 496 aaKnown RBP10.25□□□□□ -0.77
SCAF4-202ENST00000399804 RBMY1CP0DJD4 496 aa10.25□□□□□ -0.77
SCAF4-202ENST00000399804 SMG1Q96Q15 3661 aaKnown RBP10.24□□□□□ -0.77
SCAF4-202ENST00000399804 A0A096LNJ9 63 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms