RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 NEXN-AS1Q8NBZ9 246 aa5.9□□□□□ -1.46
NEDD9-203ENST00000397378 NKX6-2Q9C056 277 aaPredicted RBP5.9□□□□□ -1.46
NEDD9-203ENST00000397378 WFDC1Q9HC57 220 aa5.9□□□□□ -1.46
NEDD9-203ENST00000397378 TMEM167BQ9NRX6 74 aa5.9□□□□□ -1.46
NEDD9-203ENST00000397378 AP5S1Q9NUS5 200 aa5.9□□□□□ -1.46
NEDD9-203ENST00000397378 GRIFINA4D1Z8 144 aa5.89□□□□□ -1.47
NEDD9-203ENST00000397378 C1orf196B1AJZ1 125 aa5.89□□□□□ -1.47
NEDD9-203ENST00000397378 M0R036 132 aa5.89□□□□□ -1.47
NEDD9-203ENST00000397378 M0R381 172 aa5.89□□□□□ -1.47
NEDD9-203ENST00000397378 MPC2O95563 127 aa5.89□□□□□ -1.47
NEDD9-203ENST00000397378 PET100P0DJ07 73 aa5.89□□□□□ -1.47
NEDD9-203ENST00000397378 CRIP1P50238 77 aa5.89□□□□□ -1.47
NEDD9-203ENST00000397378 H2BFSP57053 126 aa5.89□□□□□ -1.47
NEDD9-203ENST00000397378 PRR3P79522 188 aaKnown RBP5.89□□□□□ -1.47
NEDD9-203ENST00000397378 CLPSL2Q6UWE3 100 aa5.89□□□□□ -1.47
NEDD9-203ENST00000397378 NTM-AS1Q6ZSK4 140 aa5.89□□□□□ -1.47
NEDD9-203ENST00000397378 COX8CQ7Z4L0 72 aa5.89□□□□□ -1.47
NEDD9-203ENST00000397378 VAX2Q9UIW0 290 aa5.89□□□□□ -1.47
NEDD9-203ENST00000397378 TRAV8-4A0A0B4J246 113 aa5.88□□□□□ -1.47
NEDD9-203ENST00000397378 A0A1W2PRE2 83 aa5.88□□□□□ -1.47
NEDD9-203ENST00000397378 CXorf1O96002 111 aa5.88□□□□□ -1.47
NEDD9-203ENST00000397378 P01737 135 aa5.88□□□□□ -1.47
NEDD9-203ENST00000397378 GZMBP10144 247 aa5.88□□□□□ -1.47
NEDD9-203ENST00000397378 UQCC3Q6UW78 93 aa5.88□□□□□ -1.47
NEDD9-203ENST00000397378 SPINK6Q6UWN8 80 aa5.88□□□□□ -1.47
NEDD9-203ENST00000397378 Q86TA4 180 aa5.88□□□□□ -1.47
NEDD9-203ENST00000397378 TEX46H3BTG2 121 aa5.87□□□□□ -1.47
NEDD9-203ENST00000397378 SH2D1AO60880 128 aa5.87□□□□□ -1.47
NEDD9-203ENST00000397378 REG3AQ06141 175 aa5.87□□□□□ -1.47
NEDD9-203ENST00000397378 GAGE6Q13070 117 aa5.87□□□□□ -1.47
NEDD9-203ENST00000397378 LINC01559Q495D7 138 aa5.87□□□□□ -1.47
NEDD9-203ENST00000397378 FAM162BQ5T6X4 162 aa5.87□□□□□ -1.47
NEDD9-203ENST00000397378 SVBPQ8N300 66 aa5.87□□□□□ -1.47
NEDD9-203ENST00000397378 ZFP30Q9Y2G7 519 aa5.87□□□□□ -1.47
NEDD9-203ENST00000397378 IGLV10-54A0A075B6I4 117 aa5.86□□□□□ -1.47
NEDD9-203ENST00000397378 TRBV25-1A0A075B6N4 114 aa5.86□□□□□ -1.47
NEDD9-203ENST00000397378 TRBV6-1A0A0K0K1D8 114 aa5.86□□□□□ -1.47
NEDD9-203ENST00000397378 TMEM218A2RU14 115 aa5.86□□□□□ -1.47
NEDD9-203ENST00000397378 PEX7O00628 323 aa5.86□□□□□ -1.47
NEDD9-203ENST00000397378 S100A2P29034 98 aa5.86□□□□□ -1.47
NEDD9-203ENST00000397378 SNRPEP62304 92 aaKnown RBP5.86□□□□□ -1.47
NEDD9-203ENST00000397378 SERF2P84101 59 aa5.86□□□□□ -1.47
NEDD9-203ENST00000397378 VAMP3Q15836 100 aa5.86□□□□□ -1.47
NEDD9-203ENST00000397378 ZNF56Q15929 161 aa5.86□□□□□ -1.47
NEDD9-203ENST00000397378 IQCJQ1A5X6 159 aa5.86□□□□□ -1.47
NEDD9-203ENST00000397378 GTSF1Q8WW33 167 aa5.86□□□□□ -1.47
NEDD9-203ENST00000397378 HIST1H2BAQ96A08 127 aa5.86□□□□□ -1.47
NEDD9-203ENST00000397378 PSMG3Q9BT73 122 aaPredicted RBP5.86□□□□□ -1.47
NEDD9-203ENST00000397378 A0A1B0GUV1 79 aa5.85□□□□□ -1.47
NEDD9-203ENST00000397378 NPSP0C0P6 89 aa5.85□□□□□ -1.47
NEDD9-203ENST00000397378 COX6A2Q02221 97 aa5.85□□□□□ -1.47
NEDD9-203ENST00000397378 SRSF9Q13242 221 aaKnown RBP eCLIP5.85□□□□□ -1.47
NEDD9-203ENST00000397378 COX19Q49B96 90 aa5.85□□□□□ -1.47
NEDD9-203ENST00000397378 C5orf47Q569G3 176 aa5.85□□□□□ -1.47
NEDD9-203ENST00000397378 C20orf203Q8NBC4 194 aa5.85□□□□□ -1.47
NEDD9-203ENST00000397378 VPS25Q9BRG1 176 aa5.85□□□□□ -1.47
NEDD9-203ENST00000397378 ALKBH7Q9BT30 221 aaPredicted RBP5.85□□□□□ -1.47
NEDD9-203ENST00000397378 DERL1Q9BUN8 251 aa5.85□□□□□ -1.47
NEDD9-203ENST00000397378 TMSB15BA0A087X1C1 80 aa5.84□□□□□ -1.47
NEDD9-203ENST00000397378 IGHV1-24A0A0C4DH33 117 aa5.84□□□□□ -1.47
NEDD9-203ENST00000397378 K7ERU9 68 aa5.84□□□□□ -1.47
NEDD9-203ENST00000397378 ATP6V0CP27449 155 aa5.84□□□□□ -1.47
NEDD9-203ENST00000397378 RPS10P46783 165 aaKnown RBP5.84□□□□□ -1.47
NEDD9-203ENST00000397378 PRR4Q16378 134 aa5.84□□□□□ -1.47
NEDD9-203ENST00000397378 STPG4Q8N801 248 aa5.84□□□□□ -1.47
NEDD9-203ENST00000397378 PRSS3P2Q8NHM4 247 aa5.84□□□□□ -1.47
NEDD9-203ENST00000397378 ACTR3CQ9C0K3 210 aaPredicted RBP5.84□□□□□ -1.47
NEDD9-203ENST00000397378 SPANXA1Q9NS26 97 aa5.84□□□□□ -1.47
NEDD9-203ENST00000397378 TNFSF18Q9UNG2 199 aa5.84□□□□□ -1.47
NEDD9-203ENST00000397378 A0A1B0GW15 77 aa5.83□□□□□ -1.48
NEDD9-203ENST00000397378 C20orf202A1L168 122 aa5.83□□□□□ -1.48
NEDD9-203ENST00000397378 H7C1H1 209 aa5.83□□□□□ -1.48
NEDD9-203ENST00000397378 CXCL1P09341 107 aa5.83□□□□□ -1.48
NEDD9-203ENST00000397378 EIF5AP63241 154 aaKnown RBP5.83□□□□□ -1.48
NEDD9-203ENST00000397378 C15orf56Q8N910 161 aa5.83□□□□□ -1.48
NEDD9-203ENST00000397378 OR10AG1Q8NH19 301 aa5.83□□□□□ -1.48
NEDD9-203ENST00000397378 ORAOV1Q8WV07 137 aa5.83□□□□□ -1.48
NEDD9-203ENST00000397378 FMC1Q96HJ9 113 aa5.83□□□□□ -1.48
NEDD9-203ENST00000397378 ZNF471Q9BX82 626 aaPredicted RBP5.83□□□□□ -1.48
NEDD9-203ENST00000397378 IGLV4-60A0A075B6I1 120 aa5.82□□□□□ -1.48
NEDD9-203ENST00000397378 IGKV2-24A0A0C4DH68 120 aa5.82□□□□□ -1.48
NEDD9-203ENST00000397378 MUC21A0A0G2JKD1 596 aa5.82□□□□□ -1.48
NEDD9-203ENST00000397378 FAM74A7A6NL05 159 aa5.82□□□□□ -1.48
NEDD9-203ENST00000397378 F5H697 171 aa5.82□□□□□ -1.48
NEDD9-203ENST00000397378 INMT-MINDY4F8WBC2 141 aa5.82□□□□□ -1.48
NEDD9-203ENST00000397378 SNAI2O43623 268 aa5.82□□□□□ -1.48
NEDD9-203ENST00000397378 LTAP01374 205 aa5.82□□□□□ -1.48
NEDD9-203ENST00000397378 APOC3P02656 99 aa5.82□□□□□ -1.48
NEDD9-203ENST00000397378 AKR1C3P42330 323 aa5.82□□□□□ -1.48
NEDD9-203ENST00000397378 UBE2G1P62253 170 aa5.82□□□□□ -1.48
NEDD9-203ENST00000397378 FABP9Q0Z7S8 132 aa5.82□□□□□ -1.48
NEDD9-203ENST00000397378 FAM74A3Q4VXF1 159 aa5.82□□□□□ -1.48
NEDD9-203ENST00000397378 LYPD6BQ8NI32 183 aa5.82□□□□□ -1.48
NEDD9-203ENST00000397378 SSBP4Q9BWG4 385 aaPredicted RBP5.82□□□□□ -1.48
NEDD9-203ENST00000397378 GFRA4Q9GZZ7 299 aa5.82□□□□□ -1.48
NEDD9-203ENST00000397378 GEMIN7Q9H840 131 aaKnown RBP5.82□□□□□ -1.48
NEDD9-203ENST00000397378 TRAV26-2A0A0B4J265 109 aa5.81□□□□□ -1.48
NEDD9-203ENST00000397378 FAM231BA6NCW3 169 aa5.81□□□□□ -1.48
NEDD9-203ENST00000397378 OR5AL1P0C617 328 aa5.81□□□□□ -1.48
NEDD9-203ENST00000397378 CST9LP1Q5W188 147 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms