RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 GTF2H5Q6ZYL4 71 aa15.65■□□□□ 0.1
TRIM54-202ENST00000380075 TNFRSF18Q9Y5U5 241 aa15.65■□□□□ 0.1
TRIM54-202ENST00000380075 CFAP126Q5VTH2 177 aa15.64■□□□□ 0.09
TRIM54-202ENST00000380075 SHISA2Q6UWI4 295 aa15.64■□□□□ 0.09
TRIM54-202ENST00000380075 TRRAPQ9Y4A5 3859 aa15.64■□□□□ 0.09
TRIM54-202ENST00000380075 NFE4Q86UQ8 179 aa15.64■□□□□ 0.09
TRIM54-202ENST00000380075 SPATA3Q8NHX4 192 aa15.64■□□□□ 0.09
TRIM54-202ENST00000380075 SORL1Q92673 2214 aa15.63■□□□□ 0.09
TRIM54-202ENST00000380075 H3BUT2 72 aa15.63■□□□□ 0.09
TRIM54-202ENST00000380075 DEFB104AQ8WTQ1 72 aa15.63■□□□□ 0.09
TRIM54-202ENST00000380075 DNAJC30Q96LL9 226 aa15.63■□□□□ 0.09
TRIM54-202ENST00000380075 PYGO1Q9Y3Y4 419 aa15.63■□□□□ 0.09
TRIM54-202ENST00000380075 K7EP13 123 aa15.62■□□□□ 0.09
TRIM54-202ENST00000380075 HIST1H4GQ99525 98 aa15.62■□□□□ 0.09
TRIM54-202ENST00000380075 GAGE10A6NGK3 116 aa15.62■□□□□ 0.09
TRIM54-202ENST00000380075 ADARB2-AS1A8MUL3 147 aa15.62■□□□□ 0.09
TRIM54-202ENST00000380075 RS1O15537 224 aa15.62■□□□□ 0.09
TRIM54-202ENST00000380075 CRYBA4P53673 196 aa15.62■□□□□ 0.09
TRIM54-202ENST00000380075 FAM110AQ9BQ89 295 aa15.62■□□□□ 0.09
TRIM54-202ENST00000380075 TRBV7-3A0A075B6L6 115 aa15.61■□□□□ 0.09
TRIM54-202ENST00000380075 IGHV3-73A0A0B4J1V6 119 aa15.61■□□□□ 0.09
TRIM54-202ENST00000380075 ZNF815PA8K554 130 aa15.61■□□□□ 0.09
TRIM54-202ENST00000380075 IGHV3-53P01767 116 aa15.61■□□□□ 0.09
TRIM54-202ENST00000380075 XCL2Q9UBD3 114 aa15.61■□□□□ 0.09
TRIM54-202ENST00000380075 RAB37Q96AX2 223 aa15.6■□□□□ 0.09
TRIM54-202ENST00000380075 PRM2P04554 102 aa15.6■□□□□ 0.09
TRIM54-202ENST00000380075 A0A1W2PPM0 123 aa15.59■□□□□ 0.09
TRIM54-202ENST00000380075 NDUFA11Q86Y39 141 aa15.59■□□□□ 0.09
TRIM54-202ENST00000380075 TMEM170BQ5T4T1 132 aa15.58■□□□□ 0.09
TRIM54-202ENST00000380075 C1orf158Q8N1D5 194 aa15.58■□□□□ 0.09
TRIM54-202ENST00000380075 ZNRF2Q8NHG8 242 aa15.58■□□□□ 0.09
TRIM54-202ENST00000380075 IL17DQ8TAD2 202 aa15.58■□□□□ 0.09
TRIM54-202ENST00000380075 PHLDA1Q8WV24 401 aaPredicted RBP15.58■□□□□ 0.09
TRIM54-202ENST00000380075 VCX2Q9H322 139 aa15.58■□□□□ 0.09
TRIM54-202ENST00000380075 NHP2Q9NX24 153 aaKnown RBP15.58■□□□□ 0.09
TRIM54-202ENST00000380075 IGLV4-3A0A075B6K6 122 aa15.58■□□□□ 0.08
TRIM54-202ENST00000380075 K7EP34 96 aa15.58■□□□□ 0.08
TRIM54-202ENST00000380075 MRPL16Q9NX20 251 aaKnown RBP15.58■□□□□ 0.08
TRIM54-202ENST00000380075 SAP30O75446 220 aa15.57■□□□□ 0.08
TRIM54-202ENST00000380075 EMP1P54849 157 aa15.57■□□□□ 0.08
TRIM54-202ENST00000380075 FABP2P12104 132 aa15.56■□□□□ 0.08
TRIM54-202ENST00000380075 SAMD5Q5TGI4 173 aa15.56■□□□□ 0.08
TRIM54-202ENST00000380075 SCGB1D4Q6XE38 83 aa15.56■□□□□ 0.08
TRIM54-202ENST00000380075 IGLV1-51P01701 117 aa15.56■□□□□ 0.08
TRIM54-202ENST00000380075 OR5A1Q8NGJ0 315 aa15.56■□□□□ 0.08
TRIM54-202ENST00000380075 Q6ZSN1 163 aa15.55■□□□□ 0.08
TRIM54-202ENST00000380075 A0A1B0GWB2 263 aa15.55■□□□□ 0.08
TRIM54-202ENST00000380075 AMELXQ99217 191 aa15.55■□□□□ 0.08
TRIM54-202ENST00000380075 SPANXA1Q9NS26 97 aa15.55■□□□□ 0.08
TRIM54-202ENST00000380075 VWFP04275 2813 aa15.54■□□□□ 0.08
TRIM54-202ENST00000380075 AZU1P20160 251 aa15.54■□□□□ 0.08
TRIM54-202ENST00000380075 RNASE8Q8TDE3 154 aaKnown RBP15.54■□□□□ 0.08
TRIM54-202ENST00000380075 TMEM263Q8WUH6 116 aaKnown RBP15.54■□□□□ 0.08
TRIM54-202ENST00000380075 OPRPNQ99935 248 aaPredicted RBP15.54■□□□□ 0.08
TRIM54-202ENST00000380075 TMEM238LA0A1B0GVL6 79 aa15.53■□□□□ 0.08
TRIM54-202ENST00000380075 A6NJY4 79 aa15.53■□□□□ 0.08
TRIM54-202ENST00000380075 C12orf74Q32Q52 190 aa15.53■□□□□ 0.08
TRIM54-202ENST00000380075 TMEM223A0PJW6 202 aa15.53■□□□□ 0.08
TRIM54-202ENST00000380075 SPCS1Q9Y6A9 102 aa15.53■□□□□ 0.08
TRIM54-202ENST00000380075 GAGE12BA1L429 117 aa15.52■□□□□ 0.07
TRIM54-202ENST00000380075 LEPROTO15243 131 aa15.52■□□□□ 0.07
TRIM54-202ENST00000380075 J3QQQ9 107 aa15.51■□□□□ 0.07
TRIM54-202ENST00000380075 K7ERJ3 54 aa15.51■□□□□ 0.07
TRIM54-202ENST00000380075 COTL1Q14019 142 aa15.51■□□□□ 0.07
TRIM54-202ENST00000380075 NAA38Q9BRA0 125 aaKnown RBP15.51■□□□□ 0.07
TRIM54-202ENST00000380075 CHCHD7Q9BUK0 85 aa15.51■□□□□ 0.07
TRIM54-202ENST00000380075 SPANXB1Q9NS25 103 aaPredicted RBP15.51■□□□□ 0.07
TRIM54-202ENST00000380075 IGHV3OR16-12A0A075B7B8 117 aa15.51■□□□□ 0.07
TRIM54-202ENST00000380075 ZNF22P17026 224 aaPredicted RBP15.51■□□□□ 0.07
TRIM54-202ENST00000380075 LGALS3P17931 250 aaKnown RBP15.51■□□□□ 0.07
TRIM54-202ENST00000380075 A0A0J9YY99 117 aa15.5■□□□□ 0.07
TRIM54-202ENST00000380075 PLEKHB2Q96CS7 222 aa15.5■□□□□ 0.07
TRIM54-202ENST00000380075 C1QTNF4Q9BXJ3 329 aa15.5■□□□□ 0.07
TRIM54-202ENST00000380075 NACAE9PAV3 2078 aa15.49■□□□□ 0.07
TRIM54-202ENST00000380075 MRPS36P82909 103 aaKnown RBP15.49■□□□□ 0.07
TRIM54-202ENST00000380075 SRSF9Q13242 221 aaKnown RBP eCLIP15.49■□□□□ 0.07
TRIM54-202ENST00000380075 TRGV1A0A0A0MS02 117 aa15.49■□□□□ 0.07
TRIM54-202ENST00000380075 TRBV10-1A0A0K0K1A3 114 aa15.49■□□□□ 0.07
TRIM54-202ENST00000380075 IGLL5B9A064 214 aa15.49■□□□□ 0.07
TRIM54-202ENST00000380075 C19orf73Q9NVV2 129 aa15.48■□□□□ 0.07
TRIM54-202ENST00000380075 UBE2D4Q9Y2X8 147 aa15.48■□□□□ 0.07
TRIM54-202ENST00000380075 CMYA5Q8N3K9 4069 aa15.48■□□□□ 0.07
TRIM54-202ENST00000380075 TRAV4A0A0B4J268 109 aa15.47■□□□□ 0.07
TRIM54-202ENST00000380075 A0A0J9YXV3 536 aa15.47■□□□□ 0.07
TRIM54-202ENST00000380075 TSPEAR-AS2P59090 65 aa15.47■□□□□ 0.07
TRIM54-202ENST00000380075 DAZ2Q13117 558 aaKnown RBP15.47■□□□□ 0.07
TRIM54-202ENST00000380075 FAM104AQ969W3 186 aa15.47■□□□□ 0.07
TRIM54-202ENST00000380075 Q9UF83 564 aa15.47■□□□□ 0.07
TRIM54-202ENST00000380075 WNK1Q9H4A3 2382 aa15.47■□□□□ 0.07
TRIM54-202ENST00000380075 C16orf74Q96GX8 76 aa15.47■□□□□ 0.07
TRIM54-202ENST00000380075 SLC25A29Q8N8R3 303 aa15.46■□□□□ 0.07
TRIM54-202ENST00000380075 ZNF479Q96JC4 524 aa15.46■□□□□ 0.07
TRIM54-202ENST00000380075 PF4P02776 101 aa15.45■□□□□ 0.06
TRIM54-202ENST00000380075 GIG44P09565 113 aaPredicted RBP15.45■□□□□ 0.06
TRIM54-202ENST00000380075 TIMM21Q9BVV7 248 aa15.45■□□□□ 0.06
TRIM54-202ENST00000380075 PKD1L1Q8TDX9 2849 aa15.45■□□□□ 0.06
TRIM54-202ENST00000380075 CIDEAO60543 219 aa15.45■□□□□ 0.06
TRIM54-202ENST00000380075 RRN3P1Q2M238 152 aa15.44■□□□□ 0.06
TRIM54-202ENST00000380075 TINCRA0A1B0GVN0 87 aa15.44■□□□□ 0.06
TRIM54-202ENST00000380075 K7EQD1 137 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms