RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 KNCNA6PVL3 124 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 F8VRH5 84 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 P0DMU3 169 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 FAM231AP0DMU4 169 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 FAM231CP0DMU5 169 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 SLURP1P55000 103 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 PROK1P58294 105 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 CYSLTR1Q9Y271 337 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 TP53TG1Q9Y2A0 90 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 OTOGQ6ZRI0 2925 aa4.7□□□□□ -1.66
CHD6-202ENST00000373222 H3BUA1 57 aa4.69□□□□□ -1.66
CHD6-202ENST00000373222 HOXD3P31249 432 aaPredicted RBP4.69□□□□□ -1.66
CHD6-202ENST00000373222 AMTNQ6UX39 209 aa4.69□□□□□ -1.66
CHD6-202ENST00000373222 CEND1Q8N111 149 aa4.69□□□□□ -1.66
CHD6-202ENST00000373222 SPCS1Q9Y6A9 102 aa4.69□□□□□ -1.66
CHD6-202ENST00000373222 A0A0J9YX75 114 aa4.69□□□□□ -1.66
CHD6-202ENST00000373222 SDHAF1A6NFY7 115 aa4.69□□□□□ -1.66
CHD6-202ENST00000373222 C11orf86A6NJI1 115 aa4.69□□□□□ -1.66
CHD6-202ENST00000373222 H7C1H1 209 aa4.69□□□□□ -1.66
CHD6-202ENST00000373222 J3QLI3 93 aa4.69□□□□□ -1.66
CHD6-202ENST00000373222 K7EP34 96 aa4.69□□□□□ -1.66
CHD6-202ENST00000373222 TSPEAR-AS2P59090 65 aa4.69□□□□□ -1.66
CHD6-202ENST00000373222 ANK3Q12955 4377 aaKnown RBP4.68□□□□□ -1.66
CHD6-202ENST00000373222 IGLV4-69A0A075B6H9 119 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 IGHV3-16A0A0C4DH30 117 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 F5H768 121 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 HLA-DRB4P13762 266 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 SLC25A16P16260 332 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 RIPPLY3P57055 190 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 ZNF56Q15929 161 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 ORMDL2Q53FV1 153 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 ZFP2Q6ZN57 461 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 HIST1H4GQ99525 98 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 PRADC1Q9BSG0 188 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 ZNF702PQ9H963 129 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 ZNF580Q9UK33 172 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 HLA-DRB4X5D2U9 266 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 IGHV3-64A0A075B6Q5 118 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 K7EQG2 157 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 NXPH4O95158 308 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 LGALS1P09382 135 aaKnown RBP4.68□□□□□ -1.66
CHD6-202ENST00000373222 SMIM13P0DJ93 91 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 PLNP26678 52 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 POLR2KP53803 58 aaKnown RBP4.68□□□□□ -1.66
CHD6-202ENST00000373222 TAL2Q16559 108 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 ZNRF2Q8NHG8 242 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 C20orf78Q9BR46 151 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 VPS25Q9BRG1 176 aa4.68□□□□□ -1.66
CHD6-202ENST00000373222 TRBV7-3A0A075B6L6 115 aa4.67□□□□□ -1.66
CHD6-202ENST00000373222 RBMY1BA6NDE4 496 aaKnown RBP4.67□□□□□ -1.66
CHD6-202ENST00000373222 RBMY1EA6NEQ0 496 aaKnown RBP4.67□□□□□ -1.66
CHD6-202ENST00000373222 K7EMT4 169 aa4.67□□□□□ -1.66
CHD6-202ENST00000373222 RBMY1DP0C7P1 496 aaKnown RBP4.67□□□□□ -1.66
CHD6-202ENST00000373222 BEAN1Q3B7T3 259 aa4.67□□□□□ -1.66
CHD6-202ENST00000373222 RNASE13Q5GAN3 156 aaKnown RBP4.67□□□□□ -1.66
CHD6-202ENST00000373222 CEMP1Q6PRD7 247 aaPredicted RBP4.67□□□□□ -1.66
CHD6-202ENST00000373222 HIGD1BQ9P298 99 aa4.67□□□□□ -1.66
CHD6-202ENST00000373222 TRAV12-1A0A0B4J245 112 aa4.67□□□□□ -1.66
CHD6-202ENST00000373222 IGIPA6NJ69 53 aa4.67□□□□□ -1.66
CHD6-202ENST00000373222 OR11H12B2RN74 326 aa4.67□□□□□ -1.66
CHD6-202ENST00000373222 IGHV4-31P0DP07 118 aa4.67□□□□□ -1.66
CHD6-202ENST00000373222 C12orf74Q32Q52 190 aa4.67□□□□□ -1.66
CHD6-202ENST00000373222 ZNF876PQ49A33 203 aa4.67□□□□□ -1.66
CHD6-202ENST00000373222 TCTEX1D4Q5JR98 221 aa4.67□□□□□ -1.66
CHD6-202ENST00000373222 OR11H1Q8NG94 326 aa4.67□□□□□ -1.66
CHD6-202ENST00000373222 OR11H2Q8NH07 326 aa4.67□□□□□ -1.66
CHD6-202ENST00000373222 DLX4Q92988 240 aaPredicted RBP4.67□□□□□ -1.66
CHD6-202ENST00000373222 C9orf85Q96MD7 179 aa4.67□□□□□ -1.66
CHD6-202ENST00000373222 VPREB3Q9UKI3 123 aa4.67□□□□□ -1.66
CHD6-202ENST00000373222 TRRAPQ9Y4A5 3859 aa4.67□□□□□ -1.66
CHD6-202ENST00000373222 MYMXA0A1B0GTQ4 84 aa4.66□□□□□ -1.66
CHD6-202ENST00000373222 ZNF815PA8K554 130 aa4.66□□□□□ -1.66
CHD6-202ENST00000373222 IGLL5B9A064 214 aa4.66□□□□□ -1.66
CHD6-202ENST00000373222 H3BMG7 143 aa4.66□□□□□ -1.66
CHD6-202ENST00000373222 M0QY20 66 aa4.66□□□□□ -1.66
CHD6-202ENST00000373222 DEFB131AP59861 70 aa4.66□□□□□ -1.66
CHD6-202ENST00000373222 KIR2DL5BQ8NHK3 375 aa4.66□□□□□ -1.66
CHD6-202ENST00000373222 IGHV1OR15-1A0A075B7D0 117 aa4.66□□□□□ -1.66
CHD6-202ENST00000373222 MED14OSP0DP75 135 aa4.66□□□□□ -1.66
CHD6-202ENST00000373222 FABP2P12104 132 aa4.66□□□□□ -1.66
CHD6-202ENST00000373222 COX6B1P14854 86 aa4.66□□□□□ -1.66
CHD6-202ENST00000373222 SNRPD3P62318 126 aaKnown RBP4.66□□□□□ -1.66
CHD6-202ENST00000373222 Q6ZSN1 163 aa4.66□□□□□ -1.66
CHD6-202ENST00000373222 GTF2H5Q6ZYL4 71 aa4.66□□□□□ -1.66
CHD6-202ENST00000373222 TMEM61Q8N0U2 210 aa4.66□□□□□ -1.66
CHD6-202ENST00000373222 POM121L12Q8N7R1 296 aa4.66□□□□□ -1.66
CHD6-202ENST00000373222 WFDC2Q14508 124 aa4.65□□□□□ -1.66
CHD6-202ENST00000373222 TMEM170BQ5T4T1 132 aa4.65□□□□□ -1.66
CHD6-202ENST00000373222 Q6YL49 198 aa4.65□□□□□ -1.66
CHD6-202ENST00000373222 SH2D6Q7Z4S9 175 aa4.65□□□□□ -1.66
CHD6-202ENST00000373222 TEX48A0A1B0GUV7 120 aa4.65□□□□□ -1.67
CHD6-202ENST00000373222 E9PLD3 99 aa4.65□□□□□ -1.67
CHD6-202ENST00000373222 LGALS9O00182 355 aa4.65□□□□□ -1.67
CHD6-202ENST00000373222 RPL24P83731 157 aaKnown RBP4.65□□□□□ -1.67
CHD6-202ENST00000373222 SCGB1D4Q6XE38 83 aa4.65□□□□□ -1.67
CHD6-202ENST00000373222 Q96MF0 132 aa4.65□□□□□ -1.67
CHD6-202ENST00000373222 TRBV27A0A0K0K1C4 114 aa4.64□□□□□ -1.67
CHD6-202ENST00000373222 FSHBP01225 129 aa4.64□□□□□ -1.67
CHD6-202ENST00000373222 SEC61BP60468 96 aaKnown RBP4.64□□□□□ -1.67
CHD6-202ENST00000373222 FAM19A1Q7Z5A9 133 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms