RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 RPL39P62891 51 aaKnown RBP17.98■□□□□ 0.47
CTSA-203ENST00000372459 TMEM141Q96I45 108 aa17.98■□□□□ 0.47
CTSA-203ENST00000372459 TIMM17AQ99595 171 aa17.98■□□□□ 0.47
CTSA-203ENST00000372459 Q6ZTI0 123 aa17.97■□□□□ 0.47
CTSA-203ENST00000372459 DNAJC30Q96LL9 226 aa17.97■□□□□ 0.47
CTSA-203ENST00000372459 NOP10Q9NPE3 64 aaKnown RBP17.97■□□□□ 0.47
CTSA-203ENST00000372459 CHTOPQ9Y3Y2 248 aaKnown RBP17.97■□□□□ 0.47
CTSA-203ENST00000372459 GTF2H5Q6ZYL4 71 aa17.96■□□□□ 0.47
CTSA-203ENST00000372459 CHAC1Q9BUX1 264 aa17.96■□□□□ 0.47
CTSA-203ENST00000372459 PLAC8L1A1L4L8 177 aa17.95■□□□□ 0.46
CTSA-203ENST00000372459 GAGE10A6NGK3 116 aa17.95■□□□□ 0.46
CTSA-203ENST00000372459 CST9LQ9H4G1 147 aa17.95■□□□□ 0.46
CTSA-203ENST00000372459 TRAV4A0A0B4J268 109 aa17.95■□□□□ 0.46
CTSA-203ENST00000372459 TRBV25-1A0A075B6N4 114 aa17.94■□□□□ 0.46
CTSA-203ENST00000372459 PRSS29PA6NIE9 313 aa17.94■□□□□ 0.46
CTSA-203ENST00000372459 C20orf203Q8NBC4 194 aa17.94■□□□□ 0.46
CTSA-203ENST00000372459 WFDC9Q8NEX5 89 aa17.94■□□□□ 0.46
CTSA-203ENST00000372459 H3BUT2 72 aa17.93■□□□□ 0.46
CTSA-203ENST00000372459 ZNF479Q96JC4 524 aa17.93■□□□□ 0.46
CTSA-203ENST00000372459 Q9UF83 564 aa17.93■□□□□ 0.46
CTSA-203ENST00000372459 GAGE12BA1L429 117 aa17.92■□□□□ 0.46
CTSA-203ENST00000372459 K7EP34 96 aa17.92■□□□□ 0.46
CTSA-203ENST00000372459 OVOL2Q9BRP0 275 aa17.92■□□□□ 0.46
CTSA-203ENST00000372459 TTTY13Q9BZ97 58 aa17.92■□□□□ 0.46
CTSA-203ENST00000372459 TENM1Q9UKZ4 2725 aa17.91■□□□□ 0.46
CTSA-203ENST00000372459 GCSHP23434 173 aa17.9■□□□□ 0.46
CTSA-203ENST00000372459 PMVKQ15126 192 aa17.9■□□□□ 0.46
CTSA-203ENST00000372459 TEP1Q99973 2627 aaKnown RBP17.9■□□□□ 0.46
CTSA-203ENST00000372459 FXYD2P54710 66 aa17.9■□□□□ 0.46
CTSA-203ENST00000372459 OCIAD2Q56VL3 154 aa17.9■□□□□ 0.46
CTSA-203ENST00000372459 TM2D2Q9BX73 214 aa17.9■□□□□ 0.46
CTSA-203ENST00000372459 SMIM13P0DJ93 91 aa17.89■□□□□ 0.45
CTSA-203ENST00000372459 TAL2Q16559 108 aa17.89■□□□□ 0.45
CTSA-203ENST00000372459 ATRQ13535 2644 aa17.88■□□□□ 0.45
CTSA-203ENST00000372459 A0A1W2PPM0 123 aa17.88■□□□□ 0.45
CTSA-203ENST00000372459 TRGV2A0A075B6R0 118 aa17.88■□□□□ 0.45
CTSA-203ENST00000372459 KRTAP24-1Q3LI83 254 aa17.88■□□□□ 0.45
CTSA-203ENST00000372459 VWFP04275 2813 aa17.88■□□□□ 0.45
CTSA-203ENST00000372459 NOTCH3Q9UM47 2321 aa17.87■□□□□ 0.45
CTSA-203ENST00000372459 TRBV10-1A0A0K0K1A3 114 aa17.87■□□□□ 0.45
CTSA-203ENST00000372459 K7EQD1 137 aa17.87■□□□□ 0.45
CTSA-203ENST00000372459 CIDEAO60543 219 aa17.87■□□□□ 0.45
CTSA-203ENST00000372459 GAGE7O76087 117 aa17.87■□□□□ 0.45
CTSA-203ENST00000372459 GAGE12FP0CL80 117 aa17.87■□□□□ 0.45
CTSA-203ENST00000372459 GAGE12GP0CL81 117 aa17.87■□□□□ 0.45
CTSA-203ENST00000372459 GAGE12IP0CL82 117 aa17.87■□□□□ 0.45
CTSA-203ENST00000372459 CEND1Q8N111 149 aa17.87■□□□□ 0.45
CTSA-203ENST00000372459 RAB37Q96AX2 223 aa17.87■□□□□ 0.45
CTSA-203ENST00000372459 WIPF1O43516 503 aa17.86■□□□□ 0.45
CTSA-203ENST00000372459 OR5A1Q8NGJ0 315 aa17.86■□□□□ 0.45
CTSA-203ENST00000372459 COTL1Q14019 142 aa17.85■□□□□ 0.45
CTSA-203ENST00000372459 PAPPA-AS1Q5QFB9 102 aa17.85■□□□□ 0.45
CTSA-203ENST00000372459 MAPKAPK5-AS1Q8N8E1 139 aa17.85■□□□□ 0.45
CTSA-203ENST00000372459 TRBV7-3A0A075B6L6 115 aa17.84■□□□□ 0.45
CTSA-203ENST00000372459 ZNRF2Q8NHG8 242 aa17.84■□□□□ 0.45
CTSA-203ENST00000372459 PHLDA1Q8WV24 401 aaPredicted RBP17.84■□□□□ 0.45
CTSA-203ENST00000372459 RPL36AP83881 106 aaKnown RBP17.84■□□□□ 0.45
CTSA-203ENST00000372459 KIR2DL5BQ8NHK3 375 aa17.84■□□□□ 0.45
CTSA-203ENST00000372459 RPL36ALQ969Q0 106 aaKnown RBP17.84■□□□□ 0.45
CTSA-203ENST00000372459 PYGO1Q9Y3Y4 419 aa17.84■□□□□ 0.45
CTSA-203ENST00000372459 IGHV3-38A0A0C4DH36 116 aa17.83■□□□□ 0.44
CTSA-203ENST00000372459 SMIM9A6NGZ8 99 aa17.83■□□□□ 0.44
CTSA-203ENST00000372459 NAA38Q9BRA0 125 aaKnown RBP17.83■□□□□ 0.44
CTSA-203ENST00000372459 FABP2P12104 132 aa17.82■□□□□ 0.44
CTSA-203ENST00000372459 SLC25A29Q8N8R3 303 aa17.82■□□□□ 0.44
CTSA-203ENST00000372459 CHCHD7Q9BUK0 85 aa17.82■□□□□ 0.44
CTSA-203ENST00000372459 SPCS1Q9Y6A9 102 aa17.82■□□□□ 0.44
CTSA-203ENST00000372459 IGLV4-69A0A075B6H9 119 aa17.82■□□□□ 0.44
CTSA-203ENST00000372459 APOC4P55056 127 aa17.82■□□□□ 0.44
CTSA-203ENST00000372459 SAMD5Q5TGI4 173 aa17.82■□□□□ 0.44
CTSA-203ENST00000372459 OR11H2Q8NH07 326 aa17.82■□□□□ 0.44
CTSA-203ENST00000372459 K7ERU9 68 aa17.81■□□□□ 0.44
CTSA-203ENST00000372459 EMP1P54849 157 aa17.81■□□□□ 0.44
CTSA-203ENST00000372459 OPRPNQ99935 248 aaPredicted RBP17.81■□□□□ 0.44
CTSA-203ENST00000372459 X6R8D5 127 aa17.8■□□□□ 0.44
CTSA-203ENST00000372459 IGLV4-3A0A075B6K6 122 aa17.8■□□□□ 0.44
CTSA-203ENST00000372459 MYMXA0A1B0GTQ4 84 aa17.79■□□□□ 0.44
CTSA-203ENST00000372459 C11orf86A6NJI1 115 aa17.79■□□□□ 0.44
CTSA-203ENST00000372459 E9PLD3 99 aa17.79■□□□□ 0.44
CTSA-203ENST00000372459 RNF151Q2KHN1 245 aa17.79■□□□□ 0.44
CTSA-203ENST00000372459 DAZ4Q86SG3 579 aaKnown RBP17.79■□□□□ 0.44
CTSA-203ENST00000372459 VCX2Q9H322 139 aa17.79■□□□□ 0.44
CTSA-203ENST00000372459 DAZ3Q9NR90 486 aaKnown RBP17.79■□□□□ 0.44
CTSA-203ENST00000372459 NHP2Q9NX24 153 aaKnown RBP17.79■□□□□ 0.44
CTSA-203ENST00000372459 PCP4P48539 62 aa17.78■□□□□ 0.44
CTSA-203ENST00000372459 TRGV4A0A0C4DH28 118 aa17.77■□□□□ 0.44
CTSA-203ENST00000372459 TRBV6-4A0A1B0GX49 114 aa17.77■□□□□ 0.44
CTSA-203ENST00000372459 C3orf56Q8N813 242 aa17.77■□□□□ 0.44
CTSA-203ENST00000372459 SPANXA1Q9NS26 97 aa17.77■□□□□ 0.44
CTSA-203ENST00000372459 CRYBA4P53673 196 aa17.77■□□□□ 0.43
CTSA-203ENST00000372459 CYSRT1A8MQ03 144 aa17.76■□□□□ 0.43
CTSA-203ENST00000372459 K7ERJ3 54 aa17.76■□□□□ 0.43
CTSA-203ENST00000372459 UBE2D3P61077 147 aa17.76■□□□□ 0.43
CTSA-203ENST00000372459 UBE2D2P62837 147 aa17.76■□□□□ 0.43
CTSA-203ENST00000372459 UBE2D4Q9Y2X8 147 aa17.76■□□□□ 0.43
CTSA-203ENST00000372459 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.75■□□□□ 0.43
CTSA-203ENST00000372459 IGKV2-29A2NJV5 120 aaPredicted RBP17.75■□□□□ 0.43
CTSA-203ENST00000372459 GAGE12JA6NER3 117 aa17.75■□□□□ 0.43
CTSA-203ENST00000372459 GAGE4Q13068 117 aa17.75■□□□□ 0.43
CTSA-203ENST00000372459 GAGE5Q13069 117 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms