RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 TIMM21Q9BVV7 248 aa8.52□□□□□ -1.05
SMARCA1-201ENST00000371121 TRAV12-2A0A075B6T6 113 aa8.51□□□□□ -1.05
SMARCA1-201ENST00000371121 A0A1W2PPR1 153 aa8.51□□□□□ -1.05
SMARCA1-201ENST00000371121 DNAJC30Q96LL9 226 aa8.51□□□□□ -1.05
SMARCA1-201ENST00000371121 IGHV3OR16-10A0A075B7F0 116 aa8.51□□□□□ -1.05
SMARCA1-201ENST00000371121 PRSS2P07478 247 aa8.51□□□□□ -1.05
SMARCA1-201ENST00000371121 HERVK_113P63121 156 aa8.5□□□□□ -1.05
SMARCA1-201ENST00000371121 NDUFA12Q9UI09 145 aa8.5□□□□□ -1.05
SMARCA1-201ENST00000371121 ACACAQ13085 2346 aa8.5□□□□□ -1.05
SMARCA1-201ENST00000371121 NIPBLQ6KC79 2804 aaeCLIP8.5□□□□□ -1.05
SMARCA1-201ENST00000371121 RBMY1A1P0DJD3 496 aaKnown RBP8.5□□□□□ -1.05
SMARCA1-201ENST00000371121 RBMY1CP0DJD4 496 aa8.5□□□□□ -1.05
SMARCA1-201ENST00000371121 RBMY1FQ15415 496 aaKnown RBP8.5□□□□□ -1.05
SMARCA1-201ENST00000371121 LINC00526Q96FQ7 95 aa8.5□□□□□ -1.05
SMARCA1-201ENST00000371121 TLN1Q9Y490 2541 aaKnown RBP8.49□□□□□ -1.05
SMARCA1-201ENST00000371121 Q6ZSN1 163 aa8.49□□□□□ -1.05
SMARCA1-201ENST00000371121 IMUPQ9GZP8 106 aa8.49□□□□□ -1.05
SMARCA1-201ENST00000371121 ZNF469Q96JG9 3925 aaPredicted RBP8.49□□□□□ -1.05
SMARCA1-201ENST00000371121 NDUFA4O00483 81 aa8.48□□□□□ -1.05
SMARCA1-201ENST00000371121 PRM2P04554 102 aa8.48□□□□□ -1.05
SMARCA1-201ENST00000371121 PYGO1Q9Y3Y4 419 aa8.48□□□□□ -1.05
SMARCA1-201ENST00000371121 MXRA5Q9NR99 2828 aa8.48□□□□□ -1.05
SMARCA1-201ENST00000371121 FAM19A5Q7Z5A7 132 aaPredicted RBP8.48□□□□□ -1.05
SMARCA1-201ENST00000371121 TMEM101Q96IK0 257 aa8.48□□□□□ -1.05
SMARCA1-201ENST00000371121 CHCHD7Q9BUK0 85 aa8.48□□□□□ -1.05
SMARCA1-201ENST00000371121 SPANXA1Q9NS26 97 aa8.48□□□□□ -1.05
SMARCA1-201ENST00000371121 NPFFO15130 113 aa8.48□□□□□ -1.05
SMARCA1-201ENST00000371121 TRAV41A0A0B4J266 112 aa8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 IGHV3-11P01762 117 aa8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 COX6A2Q02221 97 aa8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 DAZ2Q13117 558 aaKnown RBP8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 DAZ4Q86SG3 579 aaKnown RBP8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 DAZ1Q9NQZ3 744 aaKnown RBP8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 DAZ3Q9NR90 486 aaKnown RBP8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 RHPN1-AS1Q9BWJ2 59 aa8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 UBE2D4Q9Y2X8 147 aa8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 GVINP1Q7Z2Y8 2422 aa8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 UQCRQO14949 82 aa8.46□□□□□ -1.06
SMARCA1-201ENST00000371121 FAM223BA6NKX1 122 aa8.46□□□□□ -1.06
SMARCA1-201ENST00000371121 C9orf153Q5TBE3 101 aa8.46□□□□□ -1.06
SMARCA1-201ENST00000371121 FAM223AQ8IWN6 122 aa8.46□□□□□ -1.06
SMARCA1-201ENST00000371121 TINCRA0A1B0GVN0 87 aa8.45□□□□□ -1.06
SMARCA1-201ENST00000371121 TIRAPP58753 221 aa8.45□□□□□ -1.06
SMARCA1-201ENST00000371121 UPK3BQ9BT76 320 aa8.45□□□□□ -1.06
SMARCA1-201ENST00000371121 CDKN2A-AS1Q9UH64 79 aa8.45□□□□□ -1.06
SMARCA1-201ENST00000371121 KIR2DL5BQ8NHK3 375 aa8.45□□□□□ -1.06
SMARCA1-201ENST00000371121 IGHV3-73A0A0B4J1V6 119 aa8.45□□□□□ -1.06
SMARCA1-201ENST00000371121 CD28P10747 220 aa8.45□□□□□ -1.06
SMARCA1-201ENST00000371121 LINC00308Q8TCZ7 52 aa8.45□□□□□ -1.06
SMARCA1-201ENST00000371121 CRYGAP11844 174 aa8.44□□□□□ -1.06
SMARCA1-201ENST00000371121 LINC00643Q86TS7 51 aa8.44□□□□□ -1.06
SMARCA1-201ENST00000371121 ZANQ9Y493 2812 aa8.44□□□□□ -1.06
SMARCA1-201ENST00000371121 IGLV5-45A0A087WSX0 123 aa8.43□□□□□ -1.06
SMARCA1-201ENST00000371121 COX7A2LO14548 114 aa8.43□□□□□ -1.06
SMARCA1-201ENST00000371121 EDA2RQ9HAV5 297 aa8.43□□□□□ -1.06
SMARCA1-201ENST00000371121 TIMM17BO60830 172 aa8.43□□□□□ -1.06
SMARCA1-201ENST00000371121 IGKV3-20P01619 116 aa8.43□□□□□ -1.06
SMARCA1-201ENST00000371121 COX7CP15954 63 aa8.43□□□□□ -1.06
SMARCA1-201ENST00000371121 LINC00467Q9BRT7 94 aa8.43□□□□□ -1.06
SMARCA1-201ENST00000371121 UTP20O75691 2785 aaKnown RBP8.42□□□□□ -1.06
SMARCA1-201ENST00000371121 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.42□□□□□ -1.06
SMARCA1-201ENST00000371121 IGKV2-29A2NJV5 120 aaPredicted RBP8.42□□□□□ -1.06
SMARCA1-201ENST00000371121 SMIM9A6NGZ8 99 aa8.42□□□□□ -1.06
SMARCA1-201ENST00000371121 NDUFA1O15239 70 aa8.42□□□□□ -1.06
SMARCA1-201ENST00000371121 A0A1B0GX51 115 aa8.42□□□□□ -1.06
SMARCA1-201ENST00000371121 ACYP1P07311 99 aa8.42□□□□□ -1.06
SMARCA1-201ENST00000371121 COX6CP09669 75 aa8.42□□□□□ -1.06
SMARCA1-201ENST00000371121 PEMTQ9UBM1 199 aa8.42□□□□□ -1.06
SMARCA1-201ENST00000371121 SORL1Q92673 2214 aa8.41□□□□□ -1.06
SMARCA1-201ENST00000371121 ITPR1Q14643 2758 aa8.41□□□□□ -1.06
SMARCA1-201ENST00000371121 LMO4P61968 165 aa8.41□□□□□ -1.06
SMARCA1-201ENST00000371121 SPINK13Q1W4C9 94 aa8.41□□□□□ -1.06
SMARCA1-201ENST00000371121 IGLV5-39A0A0G2JS06 123 aa8.41□□□□□ -1.06
SMARCA1-201ENST00000371121 hADV29S1A0JD25 119 aa8.41□□□□□ -1.06
SMARCA1-201ENST00000371121 LRRC75A-AS1Q8N1F1 130 aa8.41□□□□□ -1.06
SMARCA1-201ENST00000371121 CEP295Q9C0D2 2601 aa8.4□□□□□ -1.06
SMARCA1-201ENST00000371121 CXCL5P42830 114 aa8.4□□□□□ -1.06
SMARCA1-201ENST00000371121 SPTAN1Q13813 2472 aaKnown RBP8.4□□□□□ -1.07
SMARCA1-201ENST00000371121 CFHR3Q02985 330 aa8.4□□□□□ -1.07
SMARCA1-201ENST00000371121 FBXL19-AS1Q494R0 122 aa8.4□□□□□ -1.07
SMARCA1-201ENST00000371121 ZNF625Q96I27 306 aaPredicted RBP8.4□□□□□ -1.07
SMARCA1-201ENST00000371121 Q9HAA7 133 aa8.4□□□□□ -1.07
SMARCA1-201ENST00000371121 PTPRZ1P23471 2315 aaPredicted RBP8.39□□□□□ -1.07
SMARCA1-201ENST00000371121 IGHV3OR16-12A0A075B7B8 117 aa8.39□□□□□ -1.07
SMARCA1-201ENST00000371121 IGHV1OR15-1A0A075B7D0 117 aa8.39□□□□□ -1.07
SMARCA1-201ENST00000371121 IGLV1-40P01703 118 aa8.39□□□□□ -1.07
SMARCA1-201ENST00000371121 BLCAPP62952 87 aa8.39□□□□□ -1.07
SMARCA1-201ENST00000371121 A0A0U1RRA0 63 aa8.39□□□□□ -1.07
SMARCA1-201ENST00000371121 C5orf47Q569G3 176 aa8.39□□□□□ -1.07
SMARCA1-201ENST00000371121 Q5XG85 94 aa8.39□□□□□ -1.07
SMARCA1-201ENST00000371121 LINC01561Q8N1V8 128 aa8.39□□□□□ -1.07
SMARCA1-201ENST00000371121 COL6A6A6NMZ7 2263 aa8.38□□□□□ -1.07
SMARCA1-201ENST00000371121 MOB4Q9Y3A3 225 aa8.38□□□□□ -1.07
SMARCA1-201ENST00000371121 BRD3OSQ6XYD6 125 aa8.38□□□□□ -1.07
SMARCA1-201ENST00000371121 A0A087WVE0 104 aa8.38□□□□□ -1.07
SMARCA1-201ENST00000371121 BAALC-AS2P0C853 105 aa8.38□□□□□ -1.07
SMARCA1-201ENST00000371121 C10orf99Q6UWK7 81 aa8.38□□□□□ -1.07
SMARCA1-201ENST00000371121 KNCNA6PVL3 124 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 RNF152Q8N8N0 203 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 DPH3Q96FX2 82 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 388 ms