RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 ESRGQ1W209 222 aa10.37□□□□□ -0.75
RPF1-202ENST00000370656 ZFP2Q6ZN57 461 aa10.37□□□□□ -0.75
RPF1-202ENST00000370656 NIT1Q86X76 327 aa10.37□□□□□ -0.75
RPF1-202ENST00000370656 CHCHD1Q96BP2 118 aaKnown RBP10.37□□□□□ -0.75
RPF1-202ENST00000370656 SMKR1H3BMG3 65 aa10.36□□□□□ -0.75
RPF1-202ENST00000370656 GAS8-AS1O95177 125 aa10.36□□□□□ -0.75
RPF1-202ENST00000370656 CDPF1Q6NVV7 123 aa10.36□□□□□ -0.75
RPF1-202ENST00000370656 LINC00612Q8N6U2 182 aa10.36□□□□□ -0.75
RPF1-202ENST00000370656 C20orf78Q9BR46 151 aa10.36□□□□□ -0.75
RPF1-202ENST00000370656 SAMD10Q9BYL1 202 aa10.36□□□□□ -0.75
RPF1-202ENST00000370656 TRBV6-5A0A0K0K1A5 114 aa10.35□□□□□ -0.75
RPF1-202ENST00000370656 RHODO00212 210 aa10.35□□□□□ -0.75
RPF1-202ENST00000370656 CIDEAO60543 219 aa10.35□□□□□ -0.75
RPF1-202ENST00000370656 LINC00614P0C842 121 aa10.35□□□□□ -0.75
RPF1-202ENST00000370656 Q5VSD8 79 aa10.35□□□□□ -0.75
RPF1-202ENST00000370656 CFAP126Q5VTH2 177 aa10.35□□□□□ -0.75
RPF1-202ENST00000370656 C18orf15Q96N68 181 aa10.35□□□□□ -0.75
RPF1-202ENST00000370656 HIST1H2BLQ99880 126 aa10.35□□□□□ -0.75
RPF1-202ENST00000370656 MYCBP2O75592 4640 aa10.34□□□□□ -0.75
RPF1-202ENST00000370656 M0QY20 66 aa10.34□□□□□ -0.75
RPF1-202ENST00000370656 NCR2O95944 276 aa10.34□□□□□ -0.75
RPF1-202ENST00000370656 GATA1P15976 413 aaPredicted RBP10.34□□□□□ -0.75
RPF1-202ENST00000370656 PMCHP20382 165 aa10.34□□□□□ -0.75
RPF1-202ENST00000370656 SUMO4Q6EEV6 95 aa10.34□□□□□ -0.75
RPF1-202ENST00000370656 VPS13BQ7Z7G8 4022 aa10.34□□□□□ -0.75
RPF1-202ENST00000370656 FAT1Q14517 4588 aa10.33□□□□□ -0.76
RPF1-202ENST00000370656 A0A087WWL8 130 aa10.33□□□□□ -0.76
RPF1-202ENST00000370656 GAGE12BA1L429 117 aa10.33□□□□□ -0.76
RPF1-202ENST00000370656 GAGE7O76087 117 aa10.33□□□□□ -0.76
RPF1-202ENST00000370656 GAGE12FP0CL80 117 aa10.33□□□□□ -0.76
RPF1-202ENST00000370656 GAGE12GP0CL81 117 aa10.33□□□□□ -0.76
RPF1-202ENST00000370656 GAGE12IP0CL82 117 aa10.33□□□□□ -0.76
RPF1-202ENST00000370656 TMEM18Q96B42 140 aa10.33□□□□□ -0.76
RPF1-202ENST00000370656 MAP1LC3AQ9H492 121 aa10.33□□□□□ -0.76
RPF1-202ENST00000370656 NXT2Q9NPJ8 142 aaKnown RBP10.33□□□□□ -0.76
RPF1-202ENST00000370656 TRAV26-2A0A0B4J265 109 aa10.32□□□□□ -0.76
RPF1-202ENST00000370656 TRAV4A0A0B4J268 109 aa10.32□□□□□ -0.76
RPF1-202ENST00000370656 XGP55808 180 aa10.32□□□□□ -0.76
RPF1-202ENST00000370656 Q6ZRN7 208 aaPredicted RBP10.32□□□□□ -0.76
RPF1-202ENST00000370656 Q8N8P6 123 aa10.32□□□□□ -0.76
RPF1-202ENST00000370656 KRTAP4-8Q9BYQ9 185 aa10.32□□□□□ -0.76
RPF1-202ENST00000370656 MRPL16Q9NX20 251 aaKnown RBP10.32□□□□□ -0.76
RPF1-202ENST00000370656 K7EMI3 77 aa10.31□□□□□ -0.76
RPF1-202ENST00000370656 SIVA1O15304 175 aa10.31□□□□□ -0.76
RPF1-202ENST00000370656 IGHV3-53P01767 116 aa10.31□□□□□ -0.76
RPF1-202ENST00000370656 MGPP08493 103 aa10.31□□□□□ -0.76
RPF1-202ENST00000370656 S100A2P29034 98 aa10.31□□□□□ -0.76
RPF1-202ENST00000370656 IFI27P40305 119 aaPredicted RBP10.31□□□□□ -0.76
RPF1-202ENST00000370656 POLR2KP53803 58 aaKnown RBP10.31□□□□□ -0.76
RPF1-202ENST00000370656 Q6ZTI0 123 aa10.31□□□□□ -0.76
RPF1-202ENST00000370656 PRSS3P2Q8NHM4 247 aa10.31□□□□□ -0.76
RPF1-202ENST00000370656 FLG2Q5D862 2391 aaPredicted RBP10.3□□□□□ -0.76
RPF1-202ENST00000370656 TRGV1A0A0A0MS02 117 aa10.3□□□□□ -0.76
RPF1-202ENST00000370656 SUMO2P61956 95 aaKnown RBP10.3□□□□□ -0.76
RPF1-202ENST00000370656 NFE4Q86UQ8 179 aa10.3□□□□□ -0.76
RPF1-202ENST00000370656 NIT2Q9NQR4 276 aa10.3□□□□□ -0.76
RPF1-202ENST00000370656 AP5S1Q9NUS5 200 aa10.3□□□□□ -0.76
RPF1-202ENST00000370656 A0A096LPF7 62 aa10.29□□□□□ -0.76
RPF1-202ENST00000370656 H7C1H1 209 aa10.29□□□□□ -0.76
RPF1-202ENST00000370656 HSBP1O75506 76 aa10.29□□□□□ -0.76
RPF1-202ENST00000370656 FABP4P15090 132 aa10.29□□□□□ -0.76
RPF1-202ENST00000370656 PDZD11Q5EBL8 140 aa10.29□□□□□ -0.76
RPF1-202ENST00000370656 FAM74A4Q5TZK3 123 aa10.29□□□□□ -0.76
RPF1-202ENST00000370656 FA2HQ7L5A8 372 aa10.29□□□□□ -0.76
RPF1-202ENST00000370656 RPL39LQ96EH5 51 aaKnown RBP10.29□□□□□ -0.76
RPF1-202ENST00000370656 SMIM2Q9BVW6 85 aa10.29□□□□□ -0.76
RPF1-202ENST00000370656 TRGV2A0A075B6R0 118 aa10.28□□□□□ -0.76
RPF1-202ENST00000370656 TRBV27A0A0K0K1C4 114 aa10.28□□□□□ -0.76
RPF1-202ENST00000370656 F5H697 171 aa10.28□□□□□ -0.76
RPF1-202ENST00000370656 FAM229AH3BQW9 127 aa10.28□□□□□ -0.76
RPF1-202ENST00000370656 RNASEKQ6P5S7 137 aaKnown RBP10.28□□□□□ -0.76
RPF1-202ENST00000370656 Q6ZSN1 163 aa10.28□□□□□ -0.76
RPF1-202ENST00000370656 OR4C5Q8NGB2 326 aa10.28□□□□□ -0.76
RPF1-202ENST00000370656 A0A096LNJ9 63 aa10.27□□□□□ -0.77
RPF1-202ENST00000370656 IGHV1-24A0A0C4DH33 117 aa10.27□□□□□ -0.77
RPF1-202ENST00000370656 LOC389332A0A1B0GUA5 103 aa10.27□□□□□ -0.77
RPF1-202ENST00000370656 FUSP35637 526 aaKnown RBP eCLIP10.27□□□□□ -0.77
RPF1-202ENST00000370656 ZNF56Q15929 161 aa10.27□□□□□ -0.77
RPF1-202ENST00000370656 DNAJC30Q96LL9 226 aa10.27□□□□□ -0.77
RPF1-202ENST00000370656 TMEM70Q9BUB7 260 aa10.27□□□□□ -0.77
RPF1-202ENST00000370656 ST20Q9HBF5 79 aa10.27□□□□□ -0.77
RPF1-202ENST00000370656 TRAV9-2A0A087WT02 112 aa10.26□□□□□ -0.77
RPF1-202ENST00000370656 VCYO14598 125 aa10.26□□□□□ -0.77
RPF1-202ENST00000370656 AMTP48728 403 aa10.26□□□□□ -0.77
RPF1-202ENST00000370656 FAM19A2Q8N3H0 131 aa10.26□□□□□ -0.77
RPF1-202ENST00000370656 OR10D4PQ8NGN7 298 aa10.26□□□□□ -0.77
RPF1-202ENST00000370656 VSIG2Q96IQ7 327 aa10.26□□□□□ -0.77
RPF1-202ENST00000370656 ZNF479Q96JC4 524 aa10.26□□□□□ -0.77
RPF1-202ENST00000370656 TRBV10-1A0A0K0K1A3 114 aa10.25□□□□□ -0.77
RPF1-202ENST00000370656 ICOSQ9Y6W8 199 aa10.25□□□□□ -0.77
RPF1-202ENST00000370656 A0A087WTM6 91 aa10.24□□□□□ -0.77
RPF1-202ENST00000370656 TRBV6-4A0A1B0GX49 114 aa10.24□□□□□ -0.77
RPF1-202ENST00000370656 SDHAF1A6NFY7 115 aa10.24□□□□□ -0.77
RPF1-202ENST00000370656 SMR3BP02814 79 aaPredicted RBP10.24□□□□□ -0.77
RPF1-202ENST00000370656 FCER1GP30273 86 aa10.24□□□□□ -0.77
RPF1-202ENST00000370656 KRTAP10-1P60331 282 aa10.24□□□□□ -0.77
RPF1-202ENST00000370656 LAGE3Q14657 143 aa10.24□□□□□ -0.77
RPF1-202ENST00000370656 IGHV3-73A0A0B4J1V6 119 aa10.23□□□□□ -0.77
RPF1-202ENST00000370656 TCAPO15273 167 aa10.23□□□□□ -0.77
RPF1-202ENST00000370656 PAX4O43316 350 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms