RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 BEAN1Q3B7T3 259 aa11.85□□□□□ -0.51
CHD1L-203ENST00000369259 hADV29S1A0JD25 119 aa11.84□□□□□ -0.51
CHD1L-203ENST00000369259 C22orf24Q9Y442 160 aa11.84□□□□□ -0.51
CHD1L-203ENST00000369259 TRAV12-2A0A075B6T6 113 aa11.83□□□□□ -0.52
CHD1L-203ENST00000369259 IGHV1OR15-1A0A075B7D0 117 aa11.83□□□□□ -0.52
CHD1L-203ENST00000369259 INAFM2P0DMQ5 153 aa11.83□□□□□ -0.52
CHD1L-203ENST00000369259 UBTD1Q9HAC8 227 aa11.83□□□□□ -0.52
CHD1L-203ENST00000369259 PIEZO2Q9H5I5 2752 aa11.83□□□□□ -0.52
CHD1L-203ENST00000369259 IGHV3-11P01762 117 aa11.83□□□□□ -0.52
CHD1L-203ENST00000369259 FAM222AQ5U5X8 452 aa11.83□□□□□ -0.52
CHD1L-203ENST00000369259 MGAQ8IWI9 3026 aa11.82□□□□□ -0.52
CHD1L-203ENST00000369259 WIPF1O43516 503 aa11.82□□□□□ -0.52
CHD1L-203ENST00000369259 Q8N2B8 174 aa11.82□□□□□ -0.52
CHD1L-203ENST00000369259 MOB4Q9Y3A3 225 aa11.82□□□□□ -0.52
CHD1L-203ENST00000369259 IGHG2P01859 326 aa11.81□□□□□ -0.52
CHD1L-203ENST00000369259 Q8NA96 180 aa11.81□□□□□ -0.52
CHD1L-203ENST00000369259 UBE2D4Q9Y2X8 147 aa11.81□□□□□ -0.52
CHD1L-203ENST00000369259 SPTBN2O15020 2390 aa11.81□□□□□ -0.52
CHD1L-203ENST00000369259 IGHV3OR16-10A0A075B7F0 116 aa11.81□□□□□ -0.52
CHD1L-203ENST00000369259 GRNP28799 593 aaKnown RBP11.81□□□□□ -0.52
CHD1L-203ENST00000369259 USMG5Q96IX5 58 aa11.81□□□□□ -0.52
CHD1L-203ENST00000369259 CDKN2A-AS1Q9UH64 79 aa11.81□□□□□ -0.52
CHD1L-203ENST00000369259 DCHS2Q6V1P9 2916 aa11.8□□□□□ -0.52
CHD1L-203ENST00000369259 LAMA5O15230 3695 aa11.8□□□□□ -0.52
CHD1L-203ENST00000369259 IGKV3-20P01619 116 aa11.79□□□□□ -0.52
CHD1L-203ENST00000369259 COPS9Q8WXC6 57 aa11.79□□□□□ -0.52
CHD1L-203ENST00000369259 TTC28Q96AY4 2481 aa11.79□□□□□ -0.52
CHD1L-203ENST00000369259 CHCHD7Q9BUK0 85 aa11.79□□□□□ -0.52
CHD1L-203ENST00000369259 DMXL1Q9Y485 3027 aa11.79□□□□□ -0.52
CHD1L-203ENST00000369259 MED13LQ71F56 2210 aa11.79□□□□□ -0.52
CHD1L-203ENST00000369259 IGHV3-73A0A0B4J1V6 119 aa11.78□□□□□ -0.52
CHD1L-203ENST00000369259 RPL18AQ02543 176 aaKnown RBP11.78□□□□□ -0.52
CHD1L-203ENST00000369259 C11orf71Q6IPW1 123 aa11.78□□□□□ -0.52
CHD1L-203ENST00000369259 CYSTM1Q9H1C7 97 aa11.78□□□□□ -0.52
CHD1L-203ENST00000369259 TMEM258P61165 79 aa11.78□□□□□ -0.52
CHD1L-203ENST00000369259 FAM218AQ96MZ4 157 aa11.78□□□□□ -0.52
CHD1L-203ENST00000369259 Q9H8V8 135 aa11.78□□□□□ -0.52
CHD1L-203ENST00000369259 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.77□□□□□ -0.52
CHD1L-203ENST00000369259 IGLV5-45A0A087WSX0 123 aa11.77□□□□□ -0.52
CHD1L-203ENST00000369259 IGKV2-29A2NJV5 120 aaPredicted RBP11.77□□□□□ -0.52
CHD1L-203ENST00000369259 EDN2P20800 178 aa11.77□□□□□ -0.52
CHD1L-203ENST00000369259 SOSTDC1Q6X4U4 206 aa11.77□□□□□ -0.52
CHD1L-203ENST00000369259 DPH3Q96FX2 82 aa11.77□□□□□ -0.52
CHD1L-203ENST00000369259 TRAV13-1A0A0B4J241 112 aa11.77□□□□□ -0.53
CHD1L-203ENST00000369259 A0A0U1RRA0 63 aa11.77□□□□□ -0.53
CHD1L-203ENST00000369259 PROK1P58294 105 aa11.77□□□□□ -0.53
CHD1L-203ENST00000369259 LRBAP50851 2863 aa11.77□□□□□ -0.53
CHD1L-203ENST00000369259 ANKHD1Q8IWZ3 2542 aaKnown RBP11.76□□□□□ -0.53
CHD1L-203ENST00000369259 MALP21145 153 aa11.76□□□□□ -0.53
CHD1L-203ENST00000369259 ZNF625Q96I27 306 aaPredicted RBP11.76□□□□□ -0.53
CHD1L-203ENST00000369259 TRAV25A0A0B4J276 109 aa11.76□□□□□ -0.53
CHD1L-203ENST00000369259 H3BUA1 57 aa11.76□□□□□ -0.53
CHD1L-203ENST00000369259 KLRB1Q12918 225 aa11.76□□□□□ -0.53
CHD1L-203ENST00000369259 SPINK13Q1W4C9 94 aa11.76□□□□□ -0.53
CHD1L-203ENST00000369259 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.75□□□□□ -0.53
CHD1L-203ENST00000369259 KIR2DL5BQ8NHK3 375 aa11.75□□□□□ -0.53
CHD1L-203ENST00000369259 PF4V1P10720 104 aa11.75□□□□□ -0.53
CHD1L-203ENST00000369259 SERP2Q8N6R1 65 aa11.75□□□□□ -0.53
CHD1L-203ENST00000369259 LINC00467Q9BRT7 94 aa11.75□□□□□ -0.53
CHD1L-203ENST00000369259 PRIMA1Q86XR5 153 aa11.74□□□□□ -0.53
CHD1L-203ENST00000369259 IGLV5-39A0A0G2JS06 123 aa11.74□□□□□ -0.53
CHD1L-203ENST00000369259 K7EMT4 169 aa11.74□□□□□ -0.53
CHD1L-203ENST00000369259 Q9HAA7 133 aa11.74□□□□□ -0.53
CHD1L-203ENST00000369259 ZNF415Q09FC8 603 aa11.73□□□□□ -0.53
CHD1L-203ENST00000369259 UPK3BQ9BT76 320 aa11.73□□□□□ -0.53
CHD1L-203ENST00000369259 SVEP1Q4LDE5 3571 aa11.73□□□□□ -0.53
CHD1L-203ENST00000369259 DNAL4O96015 105 aa11.72□□□□□ -0.53
CHD1L-203ENST00000369259 COX6A2Q02221 97 aa11.72□□□□□ -0.53
CHD1L-203ENST00000369259 FBXL19-AS1Q494R0 122 aa11.72□□□□□ -0.53
CHD1L-203ENST00000369259 PRORYQ9H606 182 aa11.72□□□□□ -0.53
CHD1L-203ENST00000369259 Q9UF83 564 aa11.72□□□□□ -0.53
CHD1L-203ENST00000369259 BSNQ9UPA5 3926 aa11.72□□□□□ -0.53
CHD1L-203ENST00000369259 SNRPD3P62318 126 aaKnown RBP11.72□□□□□ -0.53
CHD1L-203ENST00000369259 HIST2H2BCQ6DN03 193 aa11.71□□□□□ -0.53
CHD1L-203ENST00000369259 HIST2H2BDQ6DRA6 164 aa11.71□□□□□ -0.53
CHD1L-203ENST00000369259 Q6JHZ5 121 aa11.71□□□□□ -0.53
CHD1L-203ENST00000369259 IGKV3D-7A0A0C4DH55 119 aa11.7□□□□□ -0.54
CHD1L-203ENST00000369259 RS1O15537 224 aa11.7□□□□□ -0.54
CHD1L-203ENST00000369259 OXTP01178 125 aa11.69□□□□□ -0.54
CHD1L-203ENST00000369259 RPL28P46779 137 aaKnown RBP11.69□□□□□ -0.54
CHD1L-203ENST00000369259 Q6ZSN1 163 aa11.69□□□□□ -0.54
CHD1L-203ENST00000369259 ACACAQ13085 2346 aa11.69□□□□□ -0.54
CHD1L-203ENST00000369259 KNCNA6PVL3 124 aa11.69□□□□□ -0.54
CHD1L-203ENST00000369259 DSCR8Q96T75 97 aa11.69□□□□□ -0.54
CHD1L-203ENST00000369259 NACAE9PAV3 2078 aa11.68□□□□□ -0.54
CHD1L-203ENST00000369259 HOXD3P31249 432 aaPredicted RBP11.68□□□□□ -0.54
CHD1L-203ENST00000369259 DGAT2L7PQ6IED9 249 aa11.68□□□□□ -0.54
CHD1L-203ENST00000369259 IGHV3-38A0A0C4DH36 116 aa11.68□□□□□ -0.54
CHD1L-203ENST00000369259 PF4P02776 101 aa11.68□□□□□ -0.54
CHD1L-203ENST00000369259 LINC00242Q5T6M2 205 aa11.68□□□□□ -0.54
CHD1L-203ENST00000369259 OVOL2Q9BRP0 275 aa11.68□□□□□ -0.54
CHD1L-203ENST00000369259 C14orf132Q9NPU4 83 aa11.68□□□□□ -0.54
CHD1L-203ENST00000369259 EP300Q09472 2414 aaPredicted RBP11.67□□□□□ -0.54
CHD1L-203ENST00000369259 IGHV3OR16-12A0A075B7B8 117 aa11.67□□□□□ -0.54
CHD1L-203ENST00000369259 SMIM1B2RUZ4 78 aa11.67□□□□□ -0.54
CHD1L-203ENST00000369259 HTN1P15515 57 aa11.67□□□□□ -0.54
CHD1L-203ENST00000369259 RNF152Q8N8N0 203 aa11.67□□□□□ -0.54
CHD1L-203ENST00000369259 LINC00846Q9NV44 126 aa11.67□□□□□ -0.54
CHD1L-203ENST00000369259 ANKRD11Q6UB99 2663 aaPredicted RBP11.67□□□□□ -0.54
CHD1L-203ENST00000369259 A0A087WVE0 104 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms