RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 C20orf203Q8NBC4 194 aa13.97□□□□□ -0.17
CLIP2-202ENST00000361545 LINC01545Q5VT33 79 aa13.97□□□□□ -0.17
CLIP2-202ENST00000361545 Q6ZS46 218 aa13.97□□□□□ -0.17
CLIP2-202ENST00000361545 DEFB131BA0A096LNP1 70 aa13.97□□□□□ -0.17
CLIP2-202ENST00000361545 ZFAND3Q9H8U3 227 aa13.97□□□□□ -0.17
CLIP2-202ENST00000361545 PSMG3-AS1Q96PY0 264 aa13.97□□□□□ -0.17
CLIP2-202ENST00000361545 BAALC-AS2P0C853 105 aa13.96□□□□□ -0.17
CLIP2-202ENST00000361545 UBE2AP49459 152 aa13.96□□□□□ -0.17
CLIP2-202ENST00000361545 HILS1P60008 231 aa13.96□□□□□ -0.17
CLIP2-202ENST00000361545 C18orf65Q6ZTR6 163 aa13.96□□□□□ -0.17
CLIP2-202ENST00000361545 A4D1N5 150 aa13.96□□□□□ -0.17
CLIP2-202ENST00000361545 SS18L2Q9UHA2 77 aa13.96□□□□□ -0.18
CLIP2-202ENST00000361545 C11orf86A6NJI1 115 aa13.95□□□□□ -0.18
CLIP2-202ENST00000361545 HIGD2BQ4VC39 106 aa13.95□□□□□ -0.18
CLIP2-202ENST00000361545 PSMB8P28062 276 aa13.95□□□□□ -0.18
CLIP2-202ENST00000361545 NTN5Q8WTR8 489 aaPredicted RBP13.95□□□□□ -0.18
CLIP2-202ENST00000361545 GDF5OSQ5U4N7 250 aa13.95□□□□□ -0.18
CLIP2-202ENST00000361545 SPATA25Q9BR10 227 aa13.95□□□□□ -0.18
CLIP2-202ENST00000361545 Q6ZUT4 128 aa13.94□□□□□ -0.18
CLIP2-202ENST00000361545 IGKV2-24A0A0C4DH68 120 aa13.94□□□□□ -0.18
CLIP2-202ENST00000361545 NDUFS5O43920 106 aa13.94□□□□□ -0.18
CLIP2-202ENST00000361545 LINC00269Q8N2A0 174 aa13.94□□□□□ -0.18
CLIP2-202ENST00000361545 RNF183Q96D59 192 aa13.94□□□□□ -0.18
CLIP2-202ENST00000361545 ARHGAP32A7KAX9 2087 aa13.94□□□□□ -0.18
CLIP2-202ENST00000361545 ZFYVE26Q68DK2 2539 aa13.93□□□□□ -0.18
CLIP2-202ENST00000361545 RS1O15537 224 aa13.93□□□□□ -0.18
CLIP2-202ENST00000361545 ODF3Q96PU9 254 aa13.93□□□□□ -0.18
CLIP2-202ENST00000361545 SMIM9A6NGZ8 99 aa13.93□□□□□ -0.18
CLIP2-202ENST00000361545 LYRM9A8MSI8 78 aa13.93□□□□□ -0.18
CLIP2-202ENST00000361545 DSCAML1Q8TD84 2053 aa13.93□□□□□ -0.18
CLIP2-202ENST00000361545 IGHV4-28A0A0C4DH34 117 aa13.93□□□□□ -0.18
CLIP2-202ENST00000361545 AVPP01185 164 aa13.93□□□□□ -0.18
CLIP2-202ENST00000361545 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.93□□□□□ -0.18
CLIP2-202ENST00000361545 CHD8Q9HCK8 2581 aa13.92□□□□□ -0.18
CLIP2-202ENST00000361545 PTPRSQ13332 1948 aa13.92□□□□□ -0.18
CLIP2-202ENST00000361545 WFDC10AQ9H1F0 79 aa13.91□□□□□ -0.18
CLIP2-202ENST00000361545 ANKRD11Q6UB99 2663 aaPredicted RBP13.91□□□□□ -0.18
CLIP2-202ENST00000361545 TANC2Q9HCD6 1990 aa13.91□□□□□ -0.18
CLIP2-202ENST00000361545 IGLV2-8P01709 118 aa13.91□□□□□ -0.18
CLIP2-202ENST00000361545 C15orf53Q8NAA6 179 aa13.91□□□□□ -0.18
CLIP2-202ENST00000361545 CXCL5P42830 114 aa13.91□□□□□ -0.18
CLIP2-202ENST00000361545 MIR7-3HGQ8N6C7 128 aa13.91□□□□□ -0.18
CLIP2-202ENST00000361545 Q8N6K4 173 aa13.9□□□□□ -0.18
CLIP2-202ENST00000361545 CENPFP49454 3210 aa13.9□□□□□ -0.18
CLIP2-202ENST00000361545 TRACP01848 142 aa13.9□□□□□ -0.18
CLIP2-202ENST00000361545 TLN2Q9Y4G6 2542 aa13.9□□□□□ -0.18
CLIP2-202ENST00000361545 REG3AQ06141 175 aa13.9□□□□□ -0.18
CLIP2-202ENST00000361545 KIAA1549Q9HCM3 1950 aa13.89□□□□□ -0.19
CLIP2-202ENST00000361545 PRB2P02812 416 aaPredicted RBP13.89□□□□□ -0.19
CLIP2-202ENST00000361545 GOLGB1Q14789 3259 aaKnown RBP13.88□□□□□ -0.19
CLIP2-202ENST00000361545 CRYGDP07320 174 aa13.88□□□□□ -0.19
CLIP2-202ENST00000361545 FUSP35637 526 aaKnown RBP eCLIP13.88□□□□□ -0.19
CLIP2-202ENST00000361545 IGHV1-58A0A0C4DH39 117 aa13.87□□□□□ -0.19
CLIP2-202ENST00000361545 E9PLD3 99 aa13.87□□□□□ -0.19
CLIP2-202ENST00000361545 SPANXDQ9BXN6 97 aa13.87□□□□□ -0.19
CLIP2-202ENST00000361545 IGLC6P0CF74 106 aa13.87□□□□□ -0.19
CLIP2-202ENST00000361545 ODF1Q14990 250 aa13.87□□□□□ -0.19
CLIP2-202ENST00000361545 SMIM20Q8N5G0 67 aa13.87□□□□□ -0.19
CLIP2-202ENST00000361545 H0YGX0 51 aa13.87□□□□□ -0.19
CLIP2-202ENST00000361545 MIFP14174 115 aa13.86□□□□□ -0.19
CLIP2-202ENST00000361545 ABCA12Q86UK0 2595 aa13.86□□□□□ -0.19
CLIP2-202ENST00000361545 ZFAND2AQ8N6M9 145 aa13.86□□□□□ -0.19
CLIP2-202ENST00000361545 ANKRD29Q8N6D5 301 aa13.86□□□□□ -0.19
CLIP2-202ENST00000361545 MLST8Q9BVC4 326 aa13.86□□□□□ -0.19
CLIP2-202ENST00000361545 LINC00467Q9BRT7 94 aa13.85□□□□□ -0.19
CLIP2-202ENST00000361545 CRYBA4P53673 196 aa13.85□□□□□ -0.19
CLIP2-202ENST00000361545 A0A1B0GXF2 115 aa13.84□□□□□ -0.19
CLIP2-202ENST00000361545 SPTBN4Q9H254 2564 aa13.84□□□□□ -0.19
CLIP2-202ENST00000361545 FXYD2P54710 66 aa13.84□□□□□ -0.19
CLIP2-202ENST00000361545 PROK1P58294 105 aa13.83□□□□□ -0.19
CLIP2-202ENST00000361545 OXLD1Q5BKU9 147 aa13.83□□□□□ -0.19
CLIP2-202ENST00000361545 CFAP126Q5VTH2 177 aa13.83□□□□□ -0.2
CLIP2-202ENST00000361545 CHCHD10Q8WYQ3 142 aaPredicted RBP13.83□□□□□ -0.2
CLIP2-202ENST00000361545 A0A1W2PPR1 153 aa13.83□□□□□ -0.2
CLIP2-202ENST00000361545 NEXN-AS1Q8NBZ9 246 aa13.83□□□□□ -0.2
CLIP2-202ENST00000361545 LECT2O14960 151 aa13.82□□□□□ -0.2
CLIP2-202ENST00000361545 DIRC1Q969H9 104 aa13.82□□□□□ -0.2
CLIP2-202ENST00000361545 LRP4O75096 1905 aa13.82□□□□□ -0.2
CLIP2-202ENST00000361545 IGLV1-40P01703 118 aa13.81□□□□□ -0.2
CLIP2-202ENST00000361545 CRIP1P50238 77 aa13.81□□□□□ -0.2
CLIP2-202ENST00000361545 C4orf48Q5BLP8 95 aa13.81□□□□□ -0.2
CLIP2-202ENST00000361545 BBC3Q96PG8 261 aaPredicted RBP13.81□□□□□ -0.2
CLIP2-202ENST00000361545 TAX1BP3O14907 124 aa13.81□□□□□ -0.2
CLIP2-202ENST00000361545 C14orf177Q52M58 125 aa13.81□□□□□ -0.2
CLIP2-202ENST00000361545 USP9XQ93008 2570 aaPredicted RBP13.81□□□□□ -0.2
CLIP2-202ENST00000361545 WFDC2Q14508 124 aa13.8□□□□□ -0.2
CLIP2-202ENST00000361545 PRM2P04554 102 aa13.8□□□□□ -0.2
CLIP2-202ENST00000361545 NFE4Q86UQ8 179 aa13.8□□□□□ -0.2
CLIP2-202ENST00000361545 Q8N976 141 aa13.8□□□□□ -0.2
CLIP2-202ENST00000361545 IGLV2-18A0A075B6J9 118 aa13.79□□□□□ -0.2
CLIP2-202ENST00000361545 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.79□□□□□ -0.2
CLIP2-202ENST00000361545 TNRC6BQ9UPQ9 1833 aaKnown RBP13.77□□□□□ -0.2
CLIP2-202ENST00000361545 CLEC2BQ92478 149 aa13.77□□□□□ -0.21
CLIP2-202ENST00000361545 TRBV6-8A0A0A6YYG3 113 aa13.77□□□□□ -0.21
CLIP2-202ENST00000361545 TRAV10A0A0B4J240 114 aa13.77□□□□□ -0.21
CLIP2-202ENST00000361545 CDKN2A-AS1Q9UH64 79 aa13.77□□□□□ -0.21
CLIP2-202ENST00000361545 ZNF462Q96JM2 2506 aa13.77□□□□□ -0.21
CLIP2-202ENST00000361545 HIGD2AQ9BW72 106 aa13.76□□□□□ -0.21
CLIP2-202ENST00000361545 M0QY20 66 aa13.76□□□□□ -0.21
CLIP2-202ENST00000361545 SETD2Q9BYW2 2564 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms