RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 FAM231CP0DMU5 169 aa9.13□□□□□ -0.95
UBA3-202ENST00000361055 TSPEAR-AS2P59090 65 aa9.13□□□□□ -0.95
UBA3-202ENST00000361055 ZNF256Q9Y2P7 627 aaPredicted RBP9.13□□□□□ -0.95
UBA3-202ENST00000361055 LOC107984156A0A0G2JMH3 177 aa9.13□□□□□ -0.95
UBA3-202ENST00000361055 LEPROTO15243 131 aa9.13□□□□□ -0.95
UBA3-202ENST00000361055 PSMB2P49721 201 aa9.13□□□□□ -0.95
UBA3-202ENST00000361055 SMCPP49901 116 aaPredicted RBP9.13□□□□□ -0.95
UBA3-202ENST00000361055 ZNF56Q15929 161 aa9.13□□□□□ -0.95
UBA3-202ENST00000361055 ARL17AQ8IVW1 177 aa9.13□□□□□ -0.95
UBA3-202ENST00000361055 DEFB104AQ8WTQ1 72 aa9.13□□□□□ -0.95
UBA3-202ENST00000361055 TRAV12-2A0A075B6T6 113 aa9.12□□□□□ -0.95
UBA3-202ENST00000361055 TMEM223A0PJW6 202 aa9.12□□□□□ -0.95
UBA3-202ENST00000361055 I3L3M4 83 aa9.12□□□□□ -0.95
UBA3-202ENST00000361055 LGALS3P17931 250 aaKnown RBP9.12□□□□□ -0.95
UBA3-202ENST00000361055 FOXI1Q12951 378 aa9.12□□□□□ -0.95
UBA3-202ENST00000361055 MTURNQ8N3F0 131 aa9.12□□□□□ -0.95
UBA3-202ENST00000361055 C20orf203Q8NBC4 194 aa9.12□□□□□ -0.95
UBA3-202ENST00000361055 C1QTNF4Q9BXJ3 329 aa9.12□□□□□ -0.95
UBA3-202ENST00000361055 TRGV11A0A075B6L2 103 aa9.11□□□□□ -0.95
UBA3-202ENST00000361055 IGKV3-20P01619 116 aa9.11□□□□□ -0.95
UBA3-202ENST00000361055 INSL3P51460 131 aa9.11□□□□□ -0.95
UBA3-202ENST00000361055 C10orf126Q8N4M7 172 aa9.11□□□□□ -0.95
UBA3-202ENST00000361055 UBE2E2Q96LR5 201 aa9.11□□□□□ -0.95
UBA3-202ENST00000361055 EDA2RQ9HAV5 297 aa9.11□□□□□ -0.95
UBA3-202ENST00000361055 PRO1854Q9UHT4 67 aa9.11□□□□□ -0.95
UBA3-202ENST00000361055 SMAGPQ0VAQ4 97 aa9.1□□□□□ -0.95
UBA3-202ENST00000361055 SPINK13Q1W4C9 94 aa9.1□□□□□ -0.95
UBA3-202ENST00000361055 SBSPONQ8IVN8 264 aa9.1□□□□□ -0.95
UBA3-202ENST00000361055 PROK1P58294 105 aa9.1□□□□□ -0.95
UBA3-202ENST00000361055 OPRPNQ99935 248 aaPredicted RBP9.1□□□□□ -0.95
UBA3-202ENST00000361055 VCX2Q9H322 139 aa9.1□□□□□ -0.95
UBA3-202ENST00000361055 CRYBA4P53673 196 aa9.09□□□□□ -0.95
UBA3-202ENST00000361055 TCTEX1D4Q5JR98 221 aa9.09□□□□□ -0.95
UBA3-202ENST00000361055 PYGO1Q9Y3Y4 419 aa9.09□□□□□ -0.95
UBA3-202ENST00000361055 RHODO00212 210 aa9.09□□□□□ -0.95
UBA3-202ENST00000361055 SYNJ2BPP57105 145 aa9.09□□□□□ -0.95
UBA3-202ENST00000361055 TEP1Q99973 2627 aaKnown RBP9.09□□□□□ -0.95
UBA3-202ENST00000361055 NIPBLQ6KC79 2804 aaeCLIP9.09□□□□□ -0.96
UBA3-202ENST00000361055 IGLV4-3A0A075B6K6 122 aa9.08□□□□□ -0.96
UBA3-202ENST00000361055 TCL1BO95988 128 aa9.08□□□□□ -0.96
UBA3-202ENST00000361055 ZNF22P17026 224 aaPredicted RBP9.08□□□□□ -0.96
UBA3-202ENST00000361055 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.08□□□□□ -0.96
UBA3-202ENST00000361055 C2CD3Q4AC94 2353 aa9.08□□□□□ -0.96
UBA3-202ENST00000361055 SFTA2Q6UW10 78 aa9.07□□□□□ -0.96
UBA3-202ENST00000361055 PPDPFLQ8WWR9 84 aa9.07□□□□□ -0.96
UBA3-202ENST00000361055 CIDEAO60543 219 aa9.07□□□□□ -0.96
UBA3-202ENST00000361055 SCGB1C2P0DMR2 95 aa9.07□□□□□ -0.96
UBA3-202ENST00000361055 CD28P10747 220 aa9.07□□□□□ -0.96
UBA3-202ENST00000361055 KHDC1LQ5JSQ8 128 aa9.07□□□□□ -0.96
UBA3-202ENST00000361055 TEN1Q86WV5 123 aa9.07□□□□□ -0.96
UBA3-202ENST00000361055 C4orf3Q8WVX3 66 aa9.07□□□□□ -0.96
UBA3-202ENST00000361055 A0A0J9YXV3 536 aa9.06□□□□□ -0.96
UBA3-202ENST00000361055 A4D1N5 150 aa9.06□□□□□ -0.96
UBA3-202ENST00000361055 PIK3CD-AS1Q5SR53 167 aa9.06□□□□□ -0.96
UBA3-202ENST00000361055 A0A0B4J2C4 111 aa9.06□□□□□ -0.96
UBA3-202ENST00000361055 A8MTW9 85 aa9.06□□□□□ -0.96
UBA3-202ENST00000361055 A8MWV9 139 aa9.06□□□□□ -0.96
UBA3-202ENST00000361055 M0QXV9 152 aa9.06□□□□□ -0.96
UBA3-202ENST00000361055 IGHV3-33P01772 117 aa9.06□□□□□ -0.96
UBA3-202ENST00000361055 C11orf44Q8N8P7 122 aa9.06□□□□□ -0.96
UBA3-202ENST00000361055 TMEM263Q8WUH6 116 aaKnown RBP9.06□□□□□ -0.96
UBA3-202ENST00000361055 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.05□□□□□ -0.96
UBA3-202ENST00000361055 M0R2P5 195 aa9.05□□□□□ -0.96
UBA3-202ENST00000361055 HOXD3P31249 432 aaPredicted RBP9.05□□□□□ -0.96
UBA3-202ENST00000361055 PRIMA1Q86XR5 153 aa9.05□□□□□ -0.96
UBA3-202ENST00000361055 MUSTN1Q8IVN3 82 aa9.05□□□□□ -0.96
UBA3-202ENST00000361055 PTH2Q96A98 100 aa9.05□□□□□ -0.96
UBA3-202ENST00000361055 CARD19Q96LW7 228 aa9.05□□□□□ -0.96
UBA3-202ENST00000361055 CITED2Q99967 270 aaPredicted RBP9.05□□□□□ -0.96
UBA3-202ENST00000361055 MRPS36P82909 103 aaKnown RBP9.05□□□□□ -0.96
UBA3-202ENST00000361055 C18orf65Q6ZTR6 163 aa9.05□□□□□ -0.96
UBA3-202ENST00000361055 CDIP1Q9H305 208 aa9.05□□□□□ -0.96
UBA3-202ENST00000361055 ERG28Q9UKR5 140 aa9.05□□□□□ -0.96
UBA3-202ENST00000361055 TRAV2A0A0B4J234 112 aa9.03□□□□□ -0.96
UBA3-202ENST00000361055 FAM104AQ969W3 186 aa9.03□□□□□ -0.96
UBA3-202ENST00000361055 TNFRSF18Q9Y5U5 241 aa9.03□□□□□ -0.96
UBA3-202ENST00000361055 JMJD1CQ15652 2540 aa9.03□□□□□ -0.96
UBA3-202ENST00000361055 A0A0J9YXY3 114 aa9.03□□□□□ -0.96
UBA3-202ENST00000361055 EIF4EBP3O60516 100 aaPredicted RBP9.03□□□□□ -0.96
UBA3-202ENST00000361055 RBMY1A1P0DJD3 496 aaKnown RBP9.03□□□□□ -0.96
UBA3-202ENST00000361055 RBMY1CP0DJD4 496 aa9.03□□□□□ -0.96
UBA3-202ENST00000361055 KRTAP10-3P60369 221 aa9.03□□□□□ -0.96
UBA3-202ENST00000361055 RBMY1FQ15415 496 aaKnown RBP9.03□□□□□ -0.96
UBA3-202ENST00000361055 KRTAP24-1Q3LI83 254 aa9.03□□□□□ -0.96
UBA3-202ENST00000361055 HIST2H2BDQ6DRA6 164 aa9.03□□□□□ -0.96
UBA3-202ENST00000361055 IGHV3-30-3P0DP02 117 aa9.02□□□□□ -0.97
UBA3-202ENST00000361055 DEFB136Q30KP8 78 aa9.02□□□□□ -0.97
UBA3-202ENST00000361055 RAX2Q96IS3 184 aa9.02□□□□□ -0.97
UBA3-202ENST00000361055 SPXQ9BT56 116 aa9.02□□□□□ -0.97
UBA3-202ENST00000361055 A0A1B0GV72 72 aa9.02□□□□□ -0.97
UBA3-202ENST00000361055 A0A1W2PRX2 142 aa9.02□□□□□ -0.97
UBA3-202ENST00000361055 KNCNA6PVL3 124 aa9.02□□□□□ -0.97
UBA3-202ENST00000361055 H3BMM0 161 aa9.02□□□□□ -0.97
UBA3-202ENST00000361055 TIMM21Q9BVV7 248 aa9.02□□□□□ -0.97
UBA3-202ENST00000361055 IGHV3-64A0A075B6Q5 118 aa9.01□□□□□ -0.97
UBA3-202ENST00000361055 LINC01600Q96MT4 127 aa9.01□□□□□ -0.97
UBA3-202ENST00000361055 SPANXA1Q9NS26 97 aa9.01□□□□□ -0.97
UBA3-202ENST00000361055 IGHV1-58A0A0C4DH39 117 aa9□□□□□ -0.97
UBA3-202ENST00000361055 TINCRA0A1B0GVN0 87 aa9□□□□□ -0.97
UBA3-202ENST00000361055 DEFB131AP59861 70 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms