RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 SLC25A29Q8N8R3 303 aa14.92□□□□□ -0.02
CBWD3-201ENST00000360171 AZU1P20160 251 aa14.91□□□□□ -0.02
CBWD3-201ENST00000360171 TEP1Q99973 2627 aaKnown RBP14.91□□□□□ -0.02
CBWD3-201ENST00000360171 A0A0J9YX75 114 aa14.91□□□□□ -0.02
CBWD3-201ENST00000360171 NDUFA11Q86Y39 141 aa14.91□□□□□ -0.02
CBWD3-201ENST00000360171 M0QY20 66 aa14.9□□□□□ -0.02
CBWD3-201ENST00000360171 ZNF688P0C7X2 276 aa14.9□□□□□ -0.02
CBWD3-201ENST00000360171 IGHV3-30P01768 117 aa14.9□□□□□ -0.02
CBWD3-201ENST00000360171 IGHV3-30-5P0DP03 117 aa14.9□□□□□ -0.02
CBWD3-201ENST00000360171 SNRPD3P62318 126 aaKnown RBP14.9□□□□□ -0.02
CBWD3-201ENST00000360171 ZNRF2Q8NHG8 242 aa14.9□□□□□ -0.02
CBWD3-201ENST00000360171 JMJD1CQ15652 2540 aa14.9□□□□□ -0.02
CBWD3-201ENST00000360171 TRPT1Q86TN4 253 aaKnown RBP14.89□□□□□ -0.03
CBWD3-201ENST00000360171 TMEM61Q8N0U2 210 aa14.89□□□□□ -0.03
CBWD3-201ENST00000360171 AMELXQ99217 191 aa14.89□□□□□ -0.03
CBWD3-201ENST00000360171 C1QTNF4Q9BXJ3 329 aa14.89□□□□□ -0.03
CBWD3-201ENST00000360171 GTSF1LQ9H1H1 148 aa14.89□□□□□ -0.03
CBWD3-201ENST00000360171 TENM1Q9UKZ4 2725 aa14.89□□□□□ -0.03
CBWD3-201ENST00000360171 SORL1Q92673 2214 aa14.88□□□□□ -0.03
CBWD3-201ENST00000360171 TSPEAR-AS2P59090 65 aa14.88□□□□□ -0.03
CBWD3-201ENST00000360171 TMEM170BQ5T4T1 132 aa14.88□□□□□ -0.03
CBWD3-201ENST00000360171 DYNLRB2Q8TF09 96 aa14.88□□□□□ -0.03
CBWD3-201ENST00000360171 APOMO95445 188 aa14.88□□□□□ -0.03
CBWD3-201ENST00000360171 EMP1P54849 157 aa14.88□□□□□ -0.03
CBWD3-201ENST00000360171 DEFB114Q30KQ6 69 aa14.88□□□□□ -0.03
CBWD3-201ENST00000360171 TRBV20-1A0A075B6N2 111 aa14.87□□□□□ -0.03
CBWD3-201ENST00000360171 IGHV1OR15-1A0A075B7D0 117 aa14.87□□□□□ -0.03
CBWD3-201ENST00000360171 J3QQQ9 107 aa14.87□□□□□ -0.03
CBWD3-201ENST00000360171 ZNF256Q9Y2P7 627 aaPredicted RBP14.87□□□□□ -0.03
CBWD3-201ENST00000360171 SMCPP49901 116 aaPredicted RBP14.87□□□□□ -0.03
CBWD3-201ENST00000360171 FOXI1Q12951 378 aa14.87□□□□□ -0.03
CBWD3-201ENST00000360171 Q8N1Y9 231 aa14.87□□□□□ -0.03
CBWD3-201ENST00000360171 MTURNQ8N3F0 131 aa14.87□□□□□ -0.03
CBWD3-201ENST00000360171 MDFICQ9P1T7 246 aa14.87□□□□□ -0.03
CBWD3-201ENST00000360171 ZNF56Q15929 161 aa14.86□□□□□ -0.03
CBWD3-201ENST00000360171 FAM74A4Q5TZK3 123 aa14.86□□□□□ -0.03
CBWD3-201ENST00000360171 C10orf126Q8N4M7 172 aa14.85□□□□□ -0.03
CBWD3-201ENST00000360171 LOC107984156A0A0G2JMH3 177 aa14.85□□□□□ -0.03
CBWD3-201ENST00000360171 LEPROTO15243 131 aa14.85□□□□□ -0.03
CBWD3-201ENST00000360171 CFC1BP0CG36 223 aa14.85□□□□□ -0.03
CBWD3-201ENST00000360171 CFC1P0CG37 223 aa14.85□□□□□ -0.03
CBWD3-201ENST00000360171 LGALS3P17931 250 aaKnown RBP14.85□□□□□ -0.03
CBWD3-201ENST00000360171 ARL17AQ8IVW1 177 aa14.85□□□□□ -0.03
CBWD3-201ENST00000360171 EDA2RQ9HAV5 297 aa14.85□□□□□ -0.03
CBWD3-201ENST00000360171 TMEM223A0PJW6 202 aa14.84□□□□□ -0.03
CBWD3-201ENST00000360171 C20orf203Q8NBC4 194 aa14.84□□□□□ -0.03
CBWD3-201ENST00000360171 PSMB2P49721 201 aa14.84□□□□□ -0.03
CBWD3-201ENST00000360171 INSL3P51460 131 aa14.84□□□□□ -0.03
CBWD3-201ENST00000360171 SMAGPQ0VAQ4 97 aa14.84□□□□□ -0.03
CBWD3-201ENST00000360171 P0DMU3 169 aa14.83□□□□□ -0.04
CBWD3-201ENST00000360171 FAM231AP0DMU4 169 aa14.83□□□□□ -0.04
CBWD3-201ENST00000360171 FAM231CP0DMU5 169 aa14.83□□□□□ -0.04
CBWD3-201ENST00000360171 SBSPONQ8IVN8 264 aa14.83□□□□□ -0.04
CBWD3-201ENST00000360171 I3L3M4 83 aa14.83□□□□□ -0.04
CBWD3-201ENST00000360171 TRGV11A0A075B6L2 103 aa14.82□□□□□ -0.04
CBWD3-201ENST00000360171 TRAV12-2A0A075B6T6 113 aa14.82□□□□□ -0.04
CBWD3-201ENST00000360171 PRO1854Q9UHT4 67 aa14.82□□□□□ -0.04
CBWD3-201ENST00000360171 TRAV2A0A0B4J234 112 aa14.81□□□□□ -0.04
CBWD3-201ENST00000360171 ATRQ13535 2644 aa14.81□□□□□ -0.04
CBWD3-201ENST00000360171 DEFB104AQ8WTQ1 72 aa14.8□□□□□ -0.04
CBWD3-201ENST00000360171 CRYBA4P53673 196 aa14.8□□□□□ -0.04
CBWD3-201ENST00000360171 SPINK13Q1W4C9 94 aa14.8□□□□□ -0.04
CBWD3-201ENST00000360171 TEN1Q86WV5 123 aa14.8□□□□□ -0.04
CBWD3-201ENST00000360171 VCX2Q9H322 139 aa14.8□□□□□ -0.04
CBWD3-201ENST00000360171 RHODO00212 210 aa14.79□□□□□ -0.04
CBWD3-201ENST00000360171 TCL1BO95988 128 aa14.79□□□□□ -0.04
CBWD3-201ENST00000360171 ZNF22P17026 224 aaPredicted RBP14.79□□□□□ -0.04
CBWD3-201ENST00000360171 DEFB131AP59861 70 aa14.79□□□□□ -0.04
CBWD3-201ENST00000360171 PYGO1Q9Y3Y4 419 aa14.79□□□□□ -0.04
CBWD3-201ENST00000360171 CIDEAO60543 219 aa14.78□□□□□ -0.04
CBWD3-201ENST00000360171 PPDPFLQ8WWR9 84 aa14.78□□□□□ -0.04
CBWD3-201ENST00000360171 IGLV4-3A0A075B6K6 122 aa14.78□□□□□ -0.04
CBWD3-201ENST00000360171 A0A0B4J2C4 111 aa14.78□□□□□ -0.04
CBWD3-201ENST00000360171 IGKV3-20P01619 116 aa14.78□□□□□ -0.04
CBWD3-201ENST00000360171 CITED1Q99966 193 aa14.78□□□□□ -0.04
CBWD3-201ENST00000360171 TRAV25A0A0B4J276 109 aa14.77□□□□□ -0.04
CBWD3-201ENST00000360171 M0QXV9 152 aa14.77□□□□□ -0.04
CBWD3-201ENST00000360171 LINC00482Q8N8I6 264 aa14.77□□□□□ -0.04
CBWD3-201ENST00000360171 MAP6D1Q9H9H5 199 aa14.77□□□□□ -0.04
CBWD3-201ENST00000360171 VWFP04275 2813 aa14.77□□□□□ -0.04
CBWD3-201ENST00000360171 PF4P02776 101 aa14.77□□□□□ -0.05
CBWD3-201ENST00000360171 OPRPNQ99935 248 aaPredicted RBP14.77□□□□□ -0.05
CBWD3-201ENST00000360171 KNCNA6PVL3 124 aa14.76□□□□□ -0.05
CBWD3-201ENST00000360171 MAST4O15021 2626 aa14.76□□□□□ -0.05
CBWD3-201ENST00000360171 KRTAP24-1Q3LI83 254 aa14.75□□□□□ -0.05
CBWD3-201ENST00000360171 SFTA2Q6UW10 78 aa14.75□□□□□ -0.05
CBWD3-201ENST00000360171 A4D1N5 150 aa14.75□□□□□ -0.05
CBWD3-201ENST00000360171 CDIP1Q9H305 208 aa14.75□□□□□ -0.05
CBWD3-201ENST00000360171 A8MTW9 85 aa14.74□□□□□ -0.05
CBWD3-201ENST00000360171 A8MWV9 139 aa14.74□□□□□ -0.05
CBWD3-201ENST00000360171 IGLV1-51P01701 117 aa14.74□□□□□ -0.05
CBWD3-201ENST00000360171 PIK3CD-AS1Q5SR53 167 aa14.74□□□□□ -0.05
CBWD3-201ENST00000360171 SPATA3Q8NHX4 192 aa14.74□□□□□ -0.05
CBWD3-201ENST00000360171 A0A1B0GV72 72 aa14.74□□□□□ -0.05
CBWD3-201ENST00000360171 IGHV3-33P01772 117 aa14.74□□□□□ -0.05
CBWD3-201ENST00000360171 TMEM263Q8WUH6 116 aaKnown RBP14.74□□□□□ -0.05
CBWD3-201ENST00000360171 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.73□□□□□ -0.05
CBWD3-201ENST00000360171 M0R2P5 195 aa14.73□□□□□ -0.05
CBWD3-201ENST00000360171 ODF3L2Q3SX64 289 aa14.73□□□□□ -0.05
CBWD3-201ENST00000360171 A0A0J9YXV3 536 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms