RNA–Protein interactions for RNA: ENST00000354336.7

CRKL-201, Transcript of CRK like proto-oncogene, adaptor protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRKL, Length 5,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRKL-201ENST00000354336 SPG11Q96JI7 2443 aa13.44□□□□□ -0.26
CRKL-201ENST00000354336 TNCP24821 2201 aa13.44□□□□□ -0.26
CRKL-201ENST00000354336 HIST2H2BDQ6DRA6 164 aa13.43□□□□□ -0.26
CRKL-201ENST00000354336 CRIP1P50238 77 aa13.43□□□□□ -0.26
CRKL-201ENST00000354336 TNRC6BQ9UPQ9 1833 aaKnown RBP13.42□□□□□ -0.26
CRKL-201ENST00000354336 LINC00643Q86TS7 51 aa13.42□□□□□ -0.26
CRKL-201ENST00000354336 COX7BP24311 80 aa13.42□□□□□ -0.26
CRKL-201ENST00000354336 Q6YL49 198 aa13.42□□□□□ -0.26
CRKL-201ENST00000354336 C19orf84I3L1E1 186 aa13.41□□□□□ -0.26
CRKL-201ENST00000354336 LINC00467Q9BRT7 94 aa13.41□□□□□ -0.26
CRKL-201ENST00000354336 U3KQK5 164 aa13.41□□□□□ -0.26
CRKL-201ENST00000354336 C14orf132Q9NPU4 83 aa13.41□□□□□ -0.26
CRKL-201ENST00000354336 LRRC75A-AS1Q8N1F1 130 aa13.4□□□□□ -0.26
CRKL-201ENST00000354336 J3KT08 172 aa13.4□□□□□ -0.26
CRKL-201ENST00000354336 WFDC9Q8NEX5 89 aa13.4□□□□□ -0.26
CRKL-201ENST00000354336 TMEM223A0PJW6 202 aa13.4□□□□□ -0.26
CRKL-201ENST00000354336 ZNF22P17026 224 aaPredicted RBP13.4□□□□□ -0.26
CRKL-201ENST00000354336 DEFB114Q30KQ6 69 aa13.4□□□□□ -0.26
CRKL-201ENST00000354336 UFSP1Q6NVU6 142 aa13.39□□□□□ -0.27
CRKL-201ENST00000354336 IGLV4-3A0A075B6K6 122 aa13.39□□□□□ -0.27
CRKL-201ENST00000354336 CDKN2A-AS1Q9UH64 79 aa13.39□□□□□ -0.27
CRKL-201ENST00000354336 C5orf47Q569G3 176 aa13.39□□□□□ -0.27
CRKL-201ENST00000354336 H7C423 109 aa13.38□□□□□ -0.27
CRKL-201ENST00000354336 RNF185Q96GF1 192 aa13.38□□□□□ -0.27
CRKL-201ENST00000354336 SPANXB1Q9NS25 103 aaPredicted RBP13.38□□□□□ -0.27
CRKL-201ENST00000354336 MED12LQ86YW9 2145 aa13.38□□□□□ -0.27
CRKL-201ENST00000354336 REG3AQ06141 175 aa13.38□□□□□ -0.27
CRKL-201ENST00000354336 LINC00269Q8N2A0 174 aa13.38□□□□□ -0.27
CRKL-201ENST00000354336 TRAV26-1A0A087WT03 109 aa13.37□□□□□ -0.27
CRKL-201ENST00000354336 TP73-AS1Q9UF72 201 aa13.37□□□□□ -0.27
CRKL-201ENST00000354336 ALPK3Q96L96 1907 aa13.37□□□□□ -0.27
CRKL-201ENST00000354336 IGKV2D-26A0A0A0MRZ7 120 aa13.37□□□□□ -0.27
CRKL-201ENST00000354336 IGHV4-31P0DP07 118 aa13.37□□□□□ -0.27
CRKL-201ENST00000354336 PRORYQ9H606 182 aa13.37□□□□□ -0.27
CRKL-201ENST00000354336 M0QY20 66 aa13.37□□□□□ -0.27
CRKL-201ENST00000354336 IGLV2-11P01706 119 aa13.36□□□□□ -0.27
CRKL-201ENST00000354336 SMIM9A6NGZ8 99 aa13.36□□□□□ -0.27
CRKL-201ENST00000354336 CHKB-CPT1BH3BT56 60 aa13.36□□□□□ -0.27
CRKL-201ENST00000354336 LYRM9A8MSI8 78 aa13.35□□□□□ -0.27
CRKL-201ENST00000354336 PCDH15Q96QU1 1955 aa13.35□□□□□ -0.27
CRKL-201ENST00000354336 MAPKAPK5-AS1Q8N8E1 139 aa13.35□□□□□ -0.27
CRKL-201ENST00000354336 FAM222AQ5U5X8 452 aa13.34□□□□□ -0.27
CRKL-201ENST00000354336 CFAP126Q5VTH2 177 aa13.34□□□□□ -0.27
CRKL-201ENST00000354336 C11orf71Q6IPW1 123 aa13.34□□□□□ -0.27
CRKL-201ENST00000354336 HIVEP2P31629 2446 aa13.34□□□□□ -0.27
CRKL-201ENST00000354336 CHCHD10Q8WYQ3 142 aaPredicted RBP13.34□□□□□ -0.27
CRKL-201ENST00000354336 TEX49A0A1B0GTD5 131 aa13.33□□□□□ -0.28
CRKL-201ENST00000354336 LINC00308Q8TCZ7 52 aa13.33□□□□□ -0.28
CRKL-201ENST00000354336 PRB2P02812 416 aaPredicted RBP13.32□□□□□ -0.28
CRKL-201ENST00000354336 WFDC11Q8NEX6 87 aa13.32□□□□□ -0.28
CRKL-201ENST00000354336 KLK5Q9Y337 293 aaPredicted RBP13.32□□□□□ -0.28
CRKL-201ENST00000354336 PCNX3Q9H6A9 2034 aa13.32□□□□□ -0.28
CRKL-201ENST00000354336 WNK1Q9H4A3 2382 aa13.32□□□□□ -0.28
CRKL-201ENST00000354336 IBA57-AS1B1ANH7 110 aa13.32□□□□□ -0.28
CRKL-201ENST00000354336 C11orf45Q8TAV5 145 aa13.31□□□□□ -0.28
CRKL-201ENST00000354336 TRBV27A0A0K0K1C4 114 aa13.31□□□□□ -0.28
CRKL-201ENST00000354336 TRBV6-5A0A0K0K1A5 114 aa13.3□□□□□ -0.28
CRKL-201ENST00000354336 UPK3BQ9BT76 320 aa13.3□□□□□ -0.28
CRKL-201ENST00000354336 NOTCH2Q04721 2471 aa13.3□□□□□ -0.28
CRKL-201ENST00000354336 CSPG4Q6UVK1 2322 aa13.3□□□□□ -0.28
CRKL-201ENST00000354336 MT-ATP8P03928 68 aa13.3□□□□□ -0.28
CRKL-201ENST00000354336 Q8N6K4 173 aa13.3□□□□□ -0.28
CRKL-201ENST00000354336 NDUFC2O95298 119 aa13.29□□□□□ -0.28
CRKL-201ENST00000354336 NUP210LQ5VU65 1888 aa13.29□□□□□ -0.28
CRKL-201ENST00000354336 DSCAML1Q8TD84 2053 aa13.29□□□□□ -0.28
CRKL-201ENST00000354336 PYGO1Q9Y3Y4 419 aa13.29□□□□□ -0.28
CRKL-201ENST00000354336 TRBV30A0A0K0K1B3 111 aa13.29□□□□□ -0.28
CRKL-201ENST00000354336 CUL9Q8IWT3 2517 aa13.29□□□□□ -0.28
CRKL-201ENST00000354336 TRIAP1O43715 76 aa13.28□□□□□ -0.28
CRKL-201ENST00000354336 TRBV6-4A0A1B0GX49 114 aa13.28□□□□□ -0.28
CRKL-201ENST00000354336 BPY2O14599 106 aa13.28□□□□□ -0.28
CRKL-201ENST00000354336 TRBV6-8A0A0A6YYG3 113 aa13.28□□□□□ -0.28
CRKL-201ENST00000354336 NDUFV3P56181 108 aaKnown RBP13.28□□□□□ -0.28
CRKL-201ENST00000354336 TRAV23DV6A0A075B6W5 121 aa13.28□□□□□ -0.28
CRKL-201ENST00000354336 B9D2Q9BPU9 175 aa13.28□□□□□ -0.28
CRKL-201ENST00000354336 NRACQ8N912 160 aa13.27□□□□□ -0.28
CRKL-201ENST00000354336 COL4A4P53420 1690 aaPredicted RBP13.27□□□□□ -0.28
CRKL-201ENST00000354336 FAM110AQ9BQ89 295 aa13.27□□□□□ -0.28
CRKL-201ENST00000354336 C14orf177Q52M58 125 aa13.27□□□□□ -0.29
CRKL-201ENST00000354336 Q6ZSV7 163 aa13.27□□□□□ -0.29
CRKL-201ENST00000354336 PIK3CD-AS1Q5SR53 167 aa13.26□□□□□ -0.29
CRKL-201ENST00000354336 C10orf99Q6UWK7 81 aa13.26□□□□□ -0.29
CRKL-201ENST00000354336 RNF183Q96D59 192 aa13.26□□□□□ -0.29
CRKL-201ENST00000354336 H0Y9J4 135 aa13.26□□□□□ -0.29
CRKL-201ENST00000354336 PROK1P58294 105 aa13.26□□□□□ -0.29
CRKL-201ENST00000354336 PRR14LQ5THK1 2151 aa13.26□□□□□ -0.29
CRKL-201ENST00000354336 RNASE3P12724 160 aaKnown RBP13.26□□□□□ -0.29
CRKL-201ENST00000354336 IGKV2-24A0A0C4DH68 120 aa13.25□□□□□ -0.29
CRKL-201ENST00000354336 C4orf48Q5BLP8 95 aa13.24□□□□□ -0.29
CRKL-201ENST00000354336 TSHBP01222 138 aa13.24□□□□□ -0.29
CRKL-201ENST00000354336 SDIM1Q6ZPB5 146 aa13.24□□□□□ -0.29
CRKL-201ENST00000354336 C11orf21Q9P2W6 132 aa13.24□□□□□ -0.29
CRKL-201ENST00000354336 ATP5EP2Q5VTU8 51 aa13.23□□□□□ -0.29
CRKL-201ENST00000354336 PRO3102Q9H379 93 aa13.23□□□□□ -0.29
CRKL-201ENST00000354336 C2orf91Q6ZV80 131 aa13.23□□□□□ -0.29
CRKL-201ENST00000354336 PSMG3-AS1Q96PY0 264 aa13.23□□□□□ -0.29
CRKL-201ENST00000354336 TIMM17BO60830 172 aa13.23□□□□□ -0.29
CRKL-201ENST00000354336 PRR9Q5T870 116 aa13.23□□□□□ -0.29
CRKL-201ENST00000354336 HIGD2AQ9BW72 106 aa13.23□□□□□ -0.29
CRKL-201ENST00000354336 SLPIP03973 132 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms