RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 ZNF462Q96JM2 2506 aa11.6□□□□□ -0.55
PTPRO-202ENST00000348962 ZNF80P51504 273 aaPredicted RBP11.6□□□□□ -0.55
PTPRO-202ENST00000348962 ZFAND2AQ8N6M9 145 aa11.6□□□□□ -0.55
PTPRO-202ENST00000348962 Q6ZUT4 128 aa11.59□□□□□ -0.55
PTPRO-202ENST00000348962 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.59□□□□□ -0.55
PTPRO-202ENST00000348962 ZFAND3Q9H8U3 227 aa11.59□□□□□ -0.55
PTPRO-202ENST00000348962 ABCA12Q86UK0 2595 aa11.59□□□□□ -0.55
PTPRO-202ENST00000348962 DENND4AQ7Z401 1863 aa11.58□□□□□ -0.56
PTPRO-202ENST00000348962 ACYP1P07311 99 aa11.58□□□□□ -0.56
PTPRO-202ENST00000348962 C1orf229Q6ZS94 237 aaPredicted RBP11.58□□□□□ -0.56
PTPRO-202ENST00000348962 C11orf1Q9H5F2 150 aa11.58□□□□□ -0.56
PTPRO-202ENST00000348962 H7C423 109 aa11.58□□□□□ -0.56
PTPRO-202ENST00000348962 LRRK2Q5S007 2527 aa11.58□□□□□ -0.56
PTPRO-202ENST00000348962 CHCHD10Q8WYQ3 142 aaPredicted RBP11.57□□□□□ -0.56
PTPRO-202ENST00000348962 JMJD7-PLA2G4BH0Y9G9 81 aa11.57□□□□□ -0.56
PTPRO-202ENST00000348962 P0DMU3 169 aa11.57□□□□□ -0.56
PTPRO-202ENST00000348962 FAM231AP0DMU4 169 aa11.57□□□□□ -0.56
PTPRO-202ENST00000348962 FAM231CP0DMU5 169 aa11.57□□□□□ -0.56
PTPRO-202ENST00000348962 CEMP1Q6PRD7 247 aaPredicted RBP11.57□□□□□ -0.56
PTPRO-202ENST00000348962 TRBV6-4A0A1B0GX49 114 aa11.56□□□□□ -0.56
PTPRO-202ENST00000348962 LECT2O14960 151 aa11.56□□□□□ -0.56
PTPRO-202ENST00000348962 HIGD2AQ9BW72 106 aa11.56□□□□□ -0.56
PTPRO-202ENST00000348962 KIR2DL5BA0A0G2JN68 375 aa11.56□□□□□ -0.56
PTPRO-202ENST00000348962 KIR2DL5BA0A0G2JPC4 375 aa11.56□□□□□ -0.56
PTPRO-202ENST00000348962 KIR2DL5AQ8N109 375 aa11.56□□□□□ -0.56
PTPRO-202ENST00000348962 KIR2DL5BQ8NHK3 375 aa11.56□□□□□ -0.56
PTPRO-202ENST00000348962 TLN2Q9Y4G6 2542 aa11.56□□□□□ -0.56
PTPRO-202ENST00000348962 COX7BP24311 80 aa11.55□□□□□ -0.56
PTPRO-202ENST00000348962 Q6ZPA2 131 aa11.55□□□□□ -0.56
PTPRO-202ENST00000348962 NFE4Q86UQ8 179 aa11.55□□□□□ -0.56
PTPRO-202ENST00000348962 MBD6Q96DN6 1003 aa11.55□□□□□ -0.56
PTPRO-202ENST00000348962 Q8N6K4 173 aa11.55□□□□□ -0.56
PTPRO-202ENST00000348962 HIGD1BQ9P298 99 aa11.55□□□□□ -0.56
PTPRO-202ENST00000348962 IGLC6P0CF74 106 aa11.54□□□□□ -0.56
PTPRO-202ENST00000348962 C20orf173Q96LM9 149 aa11.54□□□□□ -0.56
PTPRO-202ENST00000348962 USP9XQ93008 2570 aaPredicted RBP11.54□□□□□ -0.56
PTPRO-202ENST00000348962 ODF1Q14990 250 aa11.54□□□□□ -0.56
PTPRO-202ENST00000348962 A0A087WZ39 114 aa11.53□□□□□ -0.56
PTPRO-202ENST00000348962 EIF4EBP1Q13541 118 aaPredicted RBP11.53□□□□□ -0.56
PTPRO-202ENST00000348962 RS1O15537 224 aa11.53□□□□□ -0.56
PTPRO-202ENST00000348962 NUPR1O60356 82 aa11.53□□□□□ -0.56
PTPRO-202ENST00000348962 MP68P56378 58 aa11.53□□□□□ -0.56
PTPRO-202ENST00000348962 COL4A4P53420 1690 aaPredicted RBP11.53□□□□□ -0.56
PTPRO-202ENST00000348962 TRBV6-8A0A0A6YYG3 113 aa11.52□□□□□ -0.56
PTPRO-202ENST00000348962 NDUFA7O95182 113 aa11.52□□□□□ -0.57
PTPRO-202ENST00000348962 LINC01620Q4KN68 170 aa11.52□□□□□ -0.57
PTPRO-202ENST00000348962 A0A1B0GX51 115 aa11.52□□□□□ -0.57
PTPRO-202ENST00000348962 CDSNQ15517 529 aa11.52□□□□□ -0.57
PTPRO-202ENST00000348962 CRIP3Q6Q6R5 217 aa11.52□□□□□ -0.57
PTPRO-202ENST00000348962 TTTY13Q9BZ97 58 aa11.52□□□□□ -0.57
PTPRO-202ENST00000348962 C10orf142B7Z368 130 aa11.52□□□□□ -0.57
PTPRO-202ENST00000348962 CEP295Q9C0D2 2601 aa11.51□□□□□ -0.57
PTPRO-202ENST00000348962 RBM3P98179 157 aaKnown RBP11.51□□□□□ -0.57
PTPRO-202ENST00000348962 MLST8Q9BVC4 326 aa11.51□□□□□ -0.57
PTPRO-202ENST00000348962 CFAP126Q5VTH2 177 aa11.51□□□□□ -0.57
PTPRO-202ENST00000348962 C7orf33Q8WU49 177 aa11.51□□□□□ -0.57
PTPRO-202ENST00000348962 NEXN-AS1Q8NBZ9 246 aa11.51□□□□□ -0.57
PTPRO-202ENST00000348962 LRCOL1A6NCL2 159 aa11.5□□□□□ -0.57
PTPRO-202ENST00000348962 TMEM256-PLSCR3K7ERE1 68 aa11.5□□□□□ -0.57
PTPRO-202ENST00000348962 PDE6GP18545 87 aa11.5□□□□□ -0.57
PTPRO-202ENST00000348962 LINC00467Q9BRT7 94 aa11.5□□□□□ -0.57
PTPRO-202ENST00000348962 SPANXCQ9NY87 97 aa11.5□□□□□ -0.57
PTPRO-202ENST00000348962 IGLV1-40P01703 118 aa11.5□□□□□ -0.57
PTPRO-202ENST00000348962 OBSL1O75147 1896 aa11.5□□□□□ -0.57
PTPRO-202ENST00000348962 LINC00322Q6ZN03 302 aaPredicted RBP11.5□□□□□ -0.57
PTPRO-202ENST00000348962 TNRC6AQ8NDV7 1962 aaKnown RBP11.5□□□□□ -0.57
PTPRO-202ENST00000348962 PLXNB1O43157 2135 aa11.5□□□□□ -0.57
PTPRO-202ENST00000348962 MIAQ16674 131 aa11.49□□□□□ -0.57
PTPRO-202ENST00000348962 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.49□□□□□ -0.57
PTPRO-202ENST00000348962 A0A1B0GXF2 115 aa11.49□□□□□ -0.57
PTPRO-202ENST00000348962 KRTAP10-9P60411 292 aa11.49□□□□□ -0.57
PTPRO-202ENST00000348962 BBC3Q96PG8 261 aaPredicted RBP11.49□□□□□ -0.57
PTPRO-202ENST00000348962 SYCNQ0VAF6 134 aa11.49□□□□□ -0.57
PTPRO-202ENST00000348962 KPRPQ5T749 579 aaPredicted RBP11.49□□□□□ -0.57
PTPRO-202ENST00000348962 DSCAML1Q8TD84 2053 aa11.48□□□□□ -0.57
PTPRO-202ENST00000348962 OXLD1Q5BKU9 147 aa11.48□□□□□ -0.57
PTPRO-202ENST00000348962 GDF5OSQ5U4N7 250 aa11.48□□□□□ -0.57
PTPRO-202ENST00000348962 CHKB-CPT1BH3BT56 60 aa11.48□□□□□ -0.57
PTPRO-202ENST00000348962 ALPK3Q96L96 1907 aa11.48□□□□□ -0.57
PTPRO-202ENST00000348962 IGLV2-8P01709 118 aa11.48□□□□□ -0.57
PTPRO-202ENST00000348962 FXYD2P54710 66 aa11.48□□□□□ -0.57
PTPRO-202ENST00000348962 FAM19A1Q7Z5A9 133 aa11.48□□□□□ -0.57
PTPRO-202ENST00000348962 IGLV2-18A0A075B6J9 118 aa11.47□□□□□ -0.57
PTPRO-202ENST00000348962 FN1P02751 2386 aaKnown RBP11.47□□□□□ -0.57
PTPRO-202ENST00000348962 CDKN2A-AS1Q9UH64 79 aa11.47□□□□□ -0.57
PTPRO-202ENST00000348962 SMR3AQ99954 134 aa11.47□□□□□ -0.57
PTPRO-202ENST00000348962 H0Y9J4 135 aa11.46□□□□□ -0.57
PTPRO-202ENST00000348962 AVPP01185 164 aa11.46□□□□□ -0.57
PTPRO-202ENST00000348962 FRMD6-AS1P0C7T7 363 aa11.46□□□□□ -0.57
PTPRO-202ENST00000348962 HIST2H2BDQ6DRA6 164 aa11.46□□□□□ -0.57
PTPRO-202ENST00000348962 FASNP49327 2511 aaKnown RBP11.46□□□□□ -0.57
PTPRO-202ENST00000348962 LY6G6CO95867 125 aa11.46□□□□□ -0.57
PTPRO-202ENST00000348962 A0A0B4J2C4 111 aa11.46□□□□□ -0.58
PTPRO-202ENST00000348962 M0QY20 66 aa11.46□□□□□ -0.58
PTPRO-202ENST00000348962 Q8N976 141 aa11.46□□□□□ -0.58
PTPRO-202ENST00000348962 ANKRD11Q6UB99 2663 aaPredicted RBP11.46□□□□□ -0.58
PTPRO-202ENST00000348962 Q6ZS46 218 aa11.45□□□□□ -0.58
PTPRO-202ENST00000348962 C18orf65Q6ZTR6 163 aa11.45□□□□□ -0.58
PTPRO-202ENST00000348962 NPSP0C0P6 89 aa11.45□□□□□ -0.58
PTPRO-202ENST00000348962 WFDC10AQ9H1F0 79 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms