RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 DNAH11Q96DT5 4516 aa11.18□□□□□ -0.62
RAB5C-201ENST00000346213 TRAV26-2A0A0B4J265 109 aa11.17□□□□□ -0.62
RAB5C-201ENST00000346213 P0DMU3 169 aa11.17□□□□□ -0.62
RAB5C-201ENST00000346213 FAM231AP0DMU4 169 aa11.17□□□□□ -0.62
RAB5C-201ENST00000346213 FAM231CP0DMU5 169 aa11.17□□□□□ -0.62
RAB5C-201ENST00000346213 LINC00315P59091 139 aa11.17□□□□□ -0.62
RAB5C-201ENST00000346213 MRPL16Q9NX20 251 aaKnown RBP11.17□□□□□ -0.62
RAB5C-201ENST00000346213 RTL8CO15255 209 aa11.17□□□□□ -0.62
RAB5C-201ENST00000346213 SMIM17P0DL12 118 aa11.17□□□□□ -0.62
RAB5C-201ENST00000346213 Q6ZR54 194 aa11.17□□□□□ -0.62
RAB5C-201ENST00000346213 Q8N8P6 123 aa11.17□□□□□ -0.62
RAB5C-201ENST00000346213 HSPB8Q9UJY1 196 aa11.17□□□□□ -0.62
RAB5C-201ENST00000346213 A0A096LNJ9 63 aa11.16□□□□□ -0.62
RAB5C-201ENST00000346213 A0A0J9YY99 117 aa11.16□□□□□ -0.62
RAB5C-201ENST00000346213 C20orf202A1L168 122 aa11.16□□□□□ -0.62
RAB5C-201ENST00000346213 VSIG2Q96IQ7 327 aa11.16□□□□□ -0.62
RAB5C-201ENST00000346213 DYNC1H1Q14204 4646 aaKnown RBP11.16□□□□□ -0.62
RAB5C-201ENST00000346213 TRAV26-1A0A087WT03 109 aa11.15□□□□□ -0.62
RAB5C-201ENST00000346213 NUDT3O95989 172 aa11.15□□□□□ -0.62
RAB5C-201ENST00000346213 PPP1R17O96001 155 aa11.15□□□□□ -0.62
RAB5C-201ENST00000346213 MGPP08493 103 aa11.15□□□□□ -0.62
RAB5C-201ENST00000346213 RBX1P62877 108 aa11.15□□□□□ -0.62
RAB5C-201ENST00000346213 LINC00173Q6ZV60 143 aa11.15□□□□□ -0.62
RAB5C-201ENST00000346213 RASL10AQ92737 203 aa11.15□□□□□ -0.62
RAB5C-201ENST00000346213 TMEM70Q9BUB7 260 aa11.15□□□□□ -0.62
RAB5C-201ENST00000346213 LINC00588Q9Y4M8 146 aa11.15□□□□□ -0.62
RAB5C-201ENST00000346213 PTH2Q96A98 100 aa11.14□□□□□ -0.63
RAB5C-201ENST00000346213 C20orf78Q9BR46 151 aa11.14□□□□□ -0.63
RAB5C-201ENST00000346213 JPT2Q9H910 190 aa11.14□□□□□ -0.63
RAB5C-201ENST00000346213 TRGV1A0A0A0MS02 117 aa11.14□□□□□ -0.63
RAB5C-201ENST00000346213 HBDP02042 147 aa11.14□□□□□ -0.63
RAB5C-201ENST00000346213 ZNF415Q09FC8 603 aa11.14□□□□□ -0.63
RAB5C-201ENST00000346213 PIK3CD-AS1Q5SR53 167 aa11.14□□□□□ -0.63
RAB5C-201ENST00000346213 VAMP8Q9BV40 100 aa11.14□□□□□ -0.63
RAB5C-201ENST00000346213 HERC2O95714 4834 aa11.13□□□□□ -0.63
RAB5C-201ENST00000346213 KIAA1109Q2LD37 5005 aa11.13□□□□□ -0.63
RAB5C-201ENST00000346213 SYS1-DBNDD2H3BUS1 97 aa11.13□□□□□ -0.63
RAB5C-201ENST00000346213 IGHV3-53P01767 116 aa11.13□□□□□ -0.63
RAB5C-201ENST00000346213 ZNF876PQ49A33 203 aa11.13□□□□□ -0.63
RAB5C-201ENST00000346213 C15orf53Q8NAA6 179 aa11.13□□□□□ -0.63
RAB5C-201ENST00000346213 ZNRF2Q8NHG8 242 aa11.13□□□□□ -0.63
RAB5C-201ENST00000346213 MAP1LC3CQ9BXW4 147 aa11.13□□□□□ -0.63
RAB5C-201ENST00000346213 A0A1B0GVY2 172 aa11.12□□□□□ -0.63
RAB5C-201ENST00000346213 CRYGDP07320 174 aa11.12□□□□□ -0.63
RAB5C-201ENST00000346213 FCER1GP30273 86 aa11.12□□□□□ -0.63
RAB5C-201ENST00000346213 C18orf15Q96N68 181 aa11.12□□□□□ -0.63
RAB5C-201ENST00000346213 SMIM2Q9BVW6 85 aa11.12□□□□□ -0.63
RAB5C-201ENST00000346213 KRTAP1-5Q9BYS1 174 aa11.12□□□□□ -0.63
RAB5C-201ENST00000346213 A0A087WWL8 130 aa11.11□□□□□ -0.63
RAB5C-201ENST00000346213 SUMO2P61956 95 aaKnown RBP11.11□□□□□ -0.63
RAB5C-201ENST00000346213 PET117Q6UWS5 81 aa11.11□□□□□ -0.63
RAB5C-201ENST00000346213 UBE2DNLQ8IWF7 75 aa11.11□□□□□ -0.63
RAB5C-201ENST00000346213 SPXQ9BT56 116 aa11.11□□□□□ -0.63
RAB5C-201ENST00000346213 CHTOPQ9Y3Y2 248 aaKnown RBP11.11□□□□□ -0.63
RAB5C-201ENST00000346213 M0R2P5 195 aa11.11□□□□□ -0.63
RAB5C-201ENST00000346213 SUMO4Q6EEV6 95 aa11.11□□□□□ -0.63
RAB5C-201ENST00000346213 RPL39LQ96EH5 51 aaKnown RBP11.11□□□□□ -0.63
RAB5C-201ENST00000346213 UQCR10Q9UDW1 63 aa11.11□□□□□ -0.63
RAB5C-201ENST00000346213 A0A096LPF7 62 aa11.1□□□□□ -0.63
RAB5C-201ENST00000346213 K7EMI3 77 aa11.1□□□□□ -0.63
RAB5C-201ENST00000346213 RPL32P62910 135 aaKnown RBP11.1□□□□□ -0.63
RAB5C-201ENST00000346213 UBE2V1Q13404 147 aa11.1□□□□□ -0.63
RAB5C-201ENST00000346213 LAGE3Q14657 143 aa11.1□□□□□ -0.63
RAB5C-201ENST00000346213 LGALS9BQ3B8N2 356 aa11.1□□□□□ -0.63
RAB5C-201ENST00000346213 SPATA12Q7Z6I5 190 aa11.1□□□□□ -0.63
RAB5C-201ENST00000346213 PTTG1IPP53801 180 aa11.09□□□□□ -0.63
RAB5C-201ENST00000346213 ESRGQ1W209 222 aa11.09□□□□□ -0.63
RAB5C-201ENST00000346213 ZNF479Q96JC4 524 aa11.09□□□□□ -0.63
RAB5C-201ENST00000346213 TRGV2A0A075B6R0 118 aa11.08□□□□□ -0.64
RAB5C-201ENST00000346213 F5H697 171 aa11.08□□□□□ -0.64
RAB5C-201ENST00000346213 FHL2Q14192 279 aa11.08□□□□□ -0.64
RAB5C-201ENST00000346213 TRBV6-5A0A0K0K1A5 114 aa11.08□□□□□ -0.64
RAB5C-201ENST00000346213 A8MWV9 139 aa11.08□□□□□ -0.64
RAB5C-201ENST00000346213 FAM74A4Q5TZK3 123 aa11.08□□□□□ -0.64
RAB5C-201ENST00000346213 ST20Q9HBF5 79 aa11.08□□□□□ -0.64
RAB5C-201ENST00000346213 POLR2KP53803 58 aaKnown RBP11.07□□□□□ -0.64
RAB5C-201ENST00000346213 ZNF56Q15929 161 aa11.07□□□□□ -0.64
RAB5C-201ENST00000346213 ORMDL2Q53FV1 153 aa11.07□□□□□ -0.64
RAB5C-201ENST00000346213 LINC01545Q5VT33 79 aa11.07□□□□□ -0.64
RAB5C-201ENST00000346213 SVIPQ8NHG7 77 aa11.07□□□□□ -0.64
RAB5C-201ENST00000346213 IFI27L1Q96BM0 104 aa11.07□□□□□ -0.64
RAB5C-201ENST00000346213 MRPS16Q9Y3D3 137 aaKnown RBP11.07□□□□□ -0.64
RAB5C-201ENST00000346213 M0QY20 66 aa11.06□□□□□ -0.64
RAB5C-201ENST00000346213 PAM16Q9Y3D7 125 aa11.06□□□□□ -0.64
RAB5C-201ENST00000346213 UFSP1Q6NVU6 142 aa11.05□□□□□ -0.64
RAB5C-201ENST00000346213 TRAV9-2A0A087WT02 112 aa11.04□□□□□ -0.64
RAB5C-201ENST00000346213 CIDEAO60543 219 aa11.04□□□□□ -0.64
RAB5C-201ENST00000346213 CRYBA4P53673 196 aa11.04□□□□□ -0.64
RAB5C-201ENST00000346213 NBDYA0A0U1RRE5 68 aa11.04□□□□□ -0.64
RAB5C-201ENST00000346213 HSBP1L1C9JCN9 74 aa11.04□□□□□ -0.64
RAB5C-201ENST00000346213 H3BNG1 76 aa11.04□□□□□ -0.64
RAB5C-201ENST00000346213 VCYO14598 125 aa11.04□□□□□ -0.64
RAB5C-201ENST00000346213 ATOH7Q8N100 152 aa11.04□□□□□ -0.64
RAB5C-201ENST00000346213 LOC100131303A0A0U1RQF7 123 aa11.03□□□□□ -0.64
RAB5C-201ENST00000346213 H7C1H1 209 aa11.03□□□□□ -0.64
RAB5C-201ENST00000346213 RS1O15537 224 aa11.03□□□□□ -0.64
RAB5C-201ENST00000346213 ATP5LO75964 103 aa11.03□□□□□ -0.64
RAB5C-201ENST00000346213 HNRNPA3P51991 378 aaKnown RBP11.03□□□□□ -0.64
RAB5C-201ENST00000346213 SPATA45Q537H7 98 aa11.03□□□□□ -0.64
RAB5C-201ENST00000346213 COX11Q9Y6N1 276 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms