RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 DAD1P61803 113 aa11.11□□□□□ -0.63
RRP1B-201ENST00000340648 RBMY1FQ15415 496 aaKnown RBP11.11□□□□□ -0.63
RRP1B-201ENST00000340648 MIR7-3HGQ8N6C7 128 aa11.11□□□□□ -0.63
RRP1B-201ENST00000340648 CDKN2A-AS1Q9UH64 79 aa11.11□□□□□ -0.63
RRP1B-201ENST00000340648 TMEM61Q8N0U2 210 aa11.11□□□□□ -0.63
RRP1B-201ENST00000340648 ATOX1O00244 68 aa11.1□□□□□ -0.63
RRP1B-201ENST00000340648 CLPSL1A2RUU4 121 aa11.1□□□□□ -0.63
RRP1B-201ENST00000340648 LINC00467Q9BRT7 94 aa11.1□□□□□ -0.63
RRP1B-201ENST00000340648 CCL24O00175 119 aa11.09□□□□□ -0.63
RRP1B-201ENST00000340648 TRBV27A0A0K0K1C4 114 aa11.09□□□□□ -0.63
RRP1B-201ENST00000340648 A8MZ25 164 aa11.09□□□□□ -0.63
RRP1B-201ENST00000340648 ZNF561-AS1K7EIQ3 104 aa11.09□□□□□ -0.63
RRP1B-201ENST00000340648 HIST2H2BCQ6DN03 193 aa11.09□□□□□ -0.63
RRP1B-201ENST00000340648 IGHV4-4A0A075B6R2 117 aa11.09□□□□□ -0.63
RRP1B-201ENST00000340648 TRAV25A0A0B4J276 109 aa11.08□□□□□ -0.64
RRP1B-201ENST00000340648 ZMAT4Q9H898 229 aa11.08□□□□□ -0.64
RRP1B-201ENST00000340648 PROK1P58294 105 aa11.08□□□□□ -0.64
RRP1B-201ENST00000340648 TET2Q6N021 2002 aaPredicted RBP11.08□□□□□ -0.64
RRP1B-201ENST00000340648 CUL9Q8IWT3 2517 aa11.08□□□□□ -0.64
RRP1B-201ENST00000340648 IGLV10-54A0A075B6I4 117 aa11.08□□□□□ -0.64
RRP1B-201ENST00000340648 MRPL23Q16540 153 aaKnown RBP11.07□□□□□ -0.64
RRP1B-201ENST00000340648 LINC00643Q86TS7 51 aa11.07□□□□□ -0.64
RRP1B-201ENST00000340648 TRBV30A0A0K0K1B3 111 aa11.07□□□□□ -0.64
RRP1B-201ENST00000340648 K7EQG2 157 aa11.07□□□□□ -0.64
RRP1B-201ENST00000340648 COX7A2LO14548 114 aa11.07□□□□□ -0.64
RRP1B-201ENST00000340648 SORL1Q92673 2214 aa11.07□□□□□ -0.64
RRP1B-201ENST00000340648 CLUHP3Q96NS8 147 aa11.07□□□□□ -0.64
RRP1B-201ENST00000340648 C14orf132Q9NPU4 83 aa11.07□□□□□ -0.64
RRP1B-201ENST00000340648 POLR2KP53803 58 aaKnown RBP11.06□□□□□ -0.64
RRP1B-201ENST00000340648 ODF3Q96PU9 254 aa11.06□□□□□ -0.64
RRP1B-201ENST00000340648 GYPEP15421 78 aa11.05□□□□□ -0.64
RRP1B-201ENST00000340648 PRO3102Q9H379 93 aa11.05□□□□□ -0.64
RRP1B-201ENST00000340648 TSHBP01222 138 aa11.05□□□□□ -0.64
RRP1B-201ENST00000340648 C16orf74Q96GX8 76 aa11.05□□□□□ -0.64
RRP1B-201ENST00000340648 F8W735 103 aaPredicted RBP11.05□□□□□ -0.64
RRP1B-201ENST00000340648 TLN1Q9Y490 2541 aaKnown RBP11.05□□□□□ -0.64
RRP1B-201ENST00000340648 TRBV6-5A0A0K0K1A5 114 aa11.04□□□□□ -0.64
RRP1B-201ENST00000340648 C11orf71Q6IPW1 123 aa11.04□□□□□ -0.64
RRP1B-201ENST00000340648 ATP5G1P05496 136 aa11.04□□□□□ -0.64
RRP1B-201ENST00000340648 MRGPRG-AS1Q2M3A8 158 aa11.04□□□□□ -0.64
RRP1B-201ENST00000340648 MAP6D1Q9H9H5 199 aa11.04□□□□□ -0.64
RRP1B-201ENST00000340648 C10orf99Q6UWK7 81 aa11.04□□□□□ -0.64
RRP1B-201ENST00000340648 LINC00308Q8TCZ7 52 aa11.04□□□□□ -0.64
RRP1B-201ENST00000340648 TMEM89A2RUT3 159 aa11.03□□□□□ -0.64
RRP1B-201ENST00000340648 J3KT08 172 aa11.03□□□□□ -0.64
RRP1B-201ENST00000340648 PTPN13Q12923 2485 aa11.03□□□□□ -0.64
RRP1B-201ENST00000340648 CACNA1AO00555 2505 aa11.03□□□□□ -0.64
RRP1B-201ENST00000340648 TMEM263Q8WUH6 116 aaKnown RBP11.02□□□□□ -0.64
RRP1B-201ENST00000340648 ATRXP46100 2492 aa11.02□□□□□ -0.65
RRP1B-201ENST00000340648 IGIPA6NJ69 53 aa11.02□□□□□ -0.65
RRP1B-201ENST00000340648 HIST2H2BDQ6DRA6 164 aa11.02□□□□□ -0.65
RRP1B-201ENST00000340648 SPANXCQ9NY87 97 aa11.02□□□□□ -0.65
RRP1B-201ENST00000340648 PIK3CD-AS1Q5SR53 167 aa11.02□□□□□ -0.65
RRP1B-201ENST00000340648 KLLNB2CW77 178 aa11.01□□□□□ -0.65
RRP1B-201ENST00000340648 C19orf84I3L1E1 186 aa11.01□□□□□ -0.65
RRP1B-201ENST00000340648 Q6ZTI0 123 aa11.01□□□□□ -0.65
RRP1B-201ENST00000340648 PSMG3-AS1Q96PY0 264 aa11.01□□□□□ -0.65
RRP1B-201ENST00000340648 PRB1P04280 392 aa11.01□□□□□ -0.65
RRP1B-201ENST00000340648 UBE2D1P51668 147 aa11.01□□□□□ -0.65
RRP1B-201ENST00000340648 ESM1Q9NQ30 184 aa11.01□□□□□ -0.65
RRP1B-201ENST00000340648 COX8CQ7Z4L0 72 aa11.01□□□□□ -0.65
RRP1B-201ENST00000340648 IGLV2-18A0A075B6J9 118 aa11.01□□□□□ -0.65
RRP1B-201ENST00000340648 CCDC179H3BU77 68 aa11.01□□□□□ -0.65
RRP1B-201ENST00000340648 NCR3O14931 201 aa11□□□□□ -0.65
RRP1B-201ENST00000340648 CRYGDP07320 174 aa11□□□□□ -0.65
RRP1B-201ENST00000340648 RBM3P98179 157 aaKnown RBP11□□□□□ -0.65
RRP1B-201ENST00000340648 SDIM1Q6ZPB5 146 aa11□□□□□ -0.65
RRP1B-201ENST00000340648 TSPEAR-AS2P59090 65 aa11□□□□□ -0.65
RRP1B-201ENST00000340648 NKAPP1Q8N9T2 125 aa11□□□□□ -0.65
RRP1B-201ENST00000340648 IGF2RP11717 2491 aa10.99□□□□□ -0.65
RRP1B-201ENST00000340648 IGLV4-69A0A075B6H9 119 aa10.99□□□□□ -0.65
RRP1B-201ENST00000340648 F8WEM9 126 aa10.99□□□□□ -0.65
RRP1B-201ENST00000340648 TRBV10-1A0A0K0K1A3 114 aa10.99□□□□□ -0.65
RRP1B-201ENST00000340648 NDUFA1O15239 70 aa10.99□□□□□ -0.65
RRP1B-201ENST00000340648 CRIP2P52943 208 aaPredicted RBP10.99□□□□□ -0.65
RRP1B-201ENST00000340648 PRM2P04554 102 aa10.99□□□□□ -0.65
RRP1B-201ENST00000340648 PYGO1Q9Y3Y4 419 aa10.99□□□□□ -0.65
RRP1B-201ENST00000340648 PSMB8P28062 276 aa10.97□□□□□ -0.65
RRP1B-201ENST00000340648 JMJD7-PLA2G4BH0Y9G9 81 aa10.97□□□□□ -0.65
RRP1B-201ENST00000340648 LST1O00453 97 aa10.97□□□□□ -0.65
RRP1B-201ENST00000340648 C9orf85Q96MD7 179 aa10.97□□□□□ -0.65
RRP1B-201ENST00000340648 C4orf3Q8WVX3 66 aa10.97□□□□□ -0.65
RRP1B-201ENST00000340648 H7C423 109 aa10.97□□□□□ -0.65
RRP1B-201ENST00000340648 UBE2D3P61077 147 aa10.97□□□□□ -0.65
RRP1B-201ENST00000340648 UBE2D2P62837 147 aa10.97□□□□□ -0.65
RRP1B-201ENST00000340648 A0A0C4DFX4 3053 aa10.97□□□□□ -0.65
RRP1B-201ENST00000340648 CDSNQ15517 529 aa10.96□□□□□ -0.65
RRP1B-201ENST00000340648 UQCRQO14949 82 aa10.96□□□□□ -0.65
RRP1B-201ENST00000340648 EDN2P20800 178 aa10.96□□□□□ -0.65
RRP1B-201ENST00000340648 SLPIP03973 132 aa10.96□□□□□ -0.66
RRP1B-201ENST00000340648 APOC4P55056 127 aa10.95□□□□□ -0.66
RRP1B-201ENST00000340648 RAI1Q7Z5J4 1906 aaPredicted RBP10.95□□□□□ -0.66
RRP1B-201ENST00000340648 TIRAPP58753 221 aa10.95□□□□□ -0.66
RRP1B-201ENST00000340648 C5orf42Q9H799 3197 aa10.95□□□□□ -0.66
RRP1B-201ENST00000340648 DEFB105AQ8NG35 78 aa10.95□□□□□ -0.66
RRP1B-201ENST00000340648 DCANP1Q8TF63 244 aa10.95□□□□□ -0.66
RRP1B-201ENST00000340648 MRAPQ8TCY5 172 aa10.94□□□□□ -0.66
RRP1B-201ENST00000340648 TRAV23DV6A0A075B6W5 121 aa10.94□□□□□ -0.66
RRP1B-201ENST00000340648 UBE2D4Q9Y2X8 147 aa10.94□□□□□ -0.66
RRP1B-201ENST00000340648 POM121L12Q8N7R1 296 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms