RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 ZNF883P0CG24 379 aa2.34□□□□□ -2.04
SOCS4-201ENST00000339298 IGHV3-30-3P0DP02 117 aa2.34□□□□□ -2.04
SOCS4-201ENST00000339298 RSPO1Q2MKA7 263 aaPredicted RBP2.34□□□□□ -2.04
SOCS4-201ENST00000339298 SMIM2Q9BVW6 85 aa2.34□□□□□ -2.04
SOCS4-201ENST00000339298 SHROOM3Q8TF72 1996 aa2.34□□□□□ -2.04
SOCS4-201ENST00000339298 IGKV1-12A0A0C4DH73 117 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 TMEM14DPA8MWL7 114 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 IGKV1D-12P01611 117 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.33□□□□□ -2.04
SOCS4-201ENST00000339298 UBR2Q8IWV8 1755 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 SCN11AQ9UI33 1791 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 MYO18BQ8IUG5 2567 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 RNASE6Q93091 150 aaKnown RBP2.33□□□□□ -2.04
SOCS4-201ENST00000339298 PROK2Q9HC23 129 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 CDK5RAP2Q96SN8 1893 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 NHSQ6T4R5 1651 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 THADAQ6YHU6 1953 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 NEXN-AS1Q8NBZ9 246 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 TMEM14BQ9NUH8 114 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 SCN7AQ01118 1682 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 DPTQ07507 201 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.33□□□□□ -2.04
SOCS4-201ENST00000339298 LINC00467Q9BRT7 94 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 CYP4F30PQ9H0H9 118 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 LAMB4A4D0S4 1761 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 SLPIP03973 132 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 IGFL2Q6UWQ7 119 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 ZNF580Q9UK33 172 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 DOCK5Q9H7D0 1870 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 MUC4Q99102 2169 aa2.33□□□□□ -2.04
SOCS4-201ENST00000339298 NDUFA4O00483 81 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 ALPK3Q96L96 1907 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 H3BPC8 53 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 SYCNQ0VAF6 134 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 DEFB108BQ8NET1 73 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 MARF1Q9Y4F3 1742 aaKnown RBP2.32□□□□□ -2.04
SOCS4-201ENST00000339298 TRAV22A0A0B4J277 110 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 IGKV1-17P01599 117 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 WFDC13Q8IUB5 93 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 Q8N3U1 123 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 C11orf72Q8NBR9 251 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 LINC00476Q8WZB0 136 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 NOTCH2Q04721 2471 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 DDX60Q8IY21 1712 aaKnown RBP2.32□□□□□ -2.04
SOCS4-201ENST00000339298 PSCAO43653 123 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 BPESC1Q9GZL8 116 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 RALGAPA2Q2PPJ7 1873 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 SPTY2D1-AS1A0A0U1RR47 76 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 HCP5Q6MZN7 132 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 UNQ9165/PRO28630Q6UXU0 137 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 TANC2Q9HCD6 1990 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 MYO5BQ9ULV0 1848 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 I3L3M4 83 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 ODF3Q96PU9 254 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 KAAG1Q9UBP8 84 aa2.32□□□□□ -2.04
SOCS4-201ENST00000339298 STRCQ7RTU9 1775 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 IGHV3OR16-9A0A0B4J2B5 98 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 PDE6GP18545 87 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 FAM229BQ4G0N7 80 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 PCOTHQ58A44 107 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 Q5XG85 94 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 C8orf17Q9NRJ1 99 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 IGLV3-9A0A075B6K5 115 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 ZFAND2AQ8N6M9 145 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 TJP1Q07157 1748 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 C19orf71A6NCJ1 209 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 C2orf70A6NJV1 201 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 RNASE4P34096 147 aaKnown RBP2.31□□□□□ -2.04
SOCS4-201ENST00000339298 PIGYQ3MUY2 71 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 BAZ2AQ9UIF9 1905 aaKnown RBP2.31□□□□□ -2.04
SOCS4-201ENST00000339298 LOC101927531A0A1B0GV80 90 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 IGLV1-47P01700 117 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 PATE2Q6UY27 113 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 CCDC88AQ3V6T2 1871 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 IGLV4-60A0A075B6I1 120 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 IGKV1-39P01597 117 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 IGKV1D-39P04432 117 aa2.31□□□□□ -2.04
SOCS4-201ENST00000339298 TLN1Q9Y490 2541 aaKnown RBP2.3□□□□□ -2.04
SOCS4-201ENST00000339298 COL24A1Q17RW2 1714 aa2.3□□□□□ -2.04
SOCS4-201ENST00000339298 CYSRT1A8MQ03 144 aa2.3□□□□□ -2.04
SOCS4-201ENST00000339298 C11orf71Q6IPW1 123 aa2.3□□□□□ -2.04
SOCS4-201ENST00000339298 UBE2D4Q9Y2X8 147 aa2.3□□□□□ -2.04
SOCS4-201ENST00000339298 BDP1A6H8Y1 2624 aa2.3□□□□□ -2.04
SOCS4-201ENST00000339298 TRGV2A0A075B6R0 118 aa2.3□□□□□ -2.04
SOCS4-201ENST00000339298 TRGV4A0A0C4DH28 118 aa2.3□□□□□ -2.04
SOCS4-201ENST00000339298 IGKV2-29A2NJV5 120 aaPredicted RBP2.3□□□□□ -2.04
SOCS4-201ENST00000339298 IGHV3-33P01772 117 aa2.3□□□□□ -2.04
SOCS4-201ENST00000339298 CSAG1Q6PB30 78 aa2.3□□□□□ -2.04
SOCS4-201ENST00000339298 CHCHD7Q9BUK0 85 aa2.3□□□□□ -2.04
SOCS4-201ENST00000339298 ANKHD1Q8IWZ3 2542 aaKnown RBP2.3□□□□□ -2.04
SOCS4-201ENST00000339298 MUC6Q6W4X9 2439 aa2.3□□□□□ -2.04
SOCS4-201ENST00000339298 IGHV3-16A0A0C4DH30 117 aa2.3□□□□□ -2.04
SOCS4-201ENST00000339298 MINOS1Q5TGZ0 78 aa2.3□□□□□ -2.04
SOCS4-201ENST00000339298 ZNF702PQ9H963 129 aa2.3□□□□□ -2.04
SOCS4-201ENST00000339298 ACACAQ13085 2346 aa2.3□□□□□ -2.04
SOCS4-201ENST00000339298 IGHV3-53P01767 116 aa2.3□□□□□ -2.04
SOCS4-201ENST00000339298 ZNF646O15015 1829 aaPredicted RBP2.3□□□□□ -2.04
SOCS4-201ENST00000339298 MYO9AB2RTY4 2548 aa2.3□□□□□ -2.04
SOCS4-201ENST00000339298 NAV1Q8NEY1 1877 aa2.3□□□□□ -2.04
SOCS4-201ENST00000339298 IGKV1-9A0A0C4DH69 117 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms