RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 ZNF48Q96MX3 618 aaPredicted RBP4.89□□□□□ -1.63
HMG20A-201ENST00000336216 PRO1854Q9UHT4 67 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 U3KQK5 164 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 TRBV7-9A0A0J9YWB2 115 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 A0A0J9YY99 117 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 A6NDX4 124 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 TSPAN13O95857 204 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 TCL1BO95988 128 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 XGP55808 180 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 MRGPRG-AS1Q2M3A8 158 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 LINC01559Q495D7 138 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 STAB1Q9NY15 2570 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 A4D1N5 150 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 J3QLI3 93 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 SCGB1A1P11684 91 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 GAGE6Q13070 117 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 C2orf82Q6UX34 121 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 ZNF843Q8N446 348 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 SMIM20Q8N5G0 67 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 BAALCQ8WXS3 180 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 TRAV8-3A0A0A6YYJ7 113 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 PFN2P35080 140 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 TEN1Q86WV5 123 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 DPH3Q96FX2 82 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 BBC3Q96PG8 261 aaPredicted RBP4.88□□□□□ -1.63
HMG20A-201ENST00000336216 NBEAL2Q6ZNJ1 2754 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 DCHS2Q6V1P9 2916 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 J3QQQ9 107 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 PRIMA1Q86XR5 153 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 SMR3AQ99954 134 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 NOTCH1P46531 2555 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 F5H768 121 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 MALP21145 153 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 PMVKQ15126 192 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 SUMO4Q6EEV6 95 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 MRPL53Q96EL3 112 aaKnown RBP4.88□□□□□ -1.63
HMG20A-201ENST00000336216 TIMM21Q9BVV7 248 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 ZFAND3Q9H8U3 227 aa4.88□□□□□ -1.63
HMG20A-201ENST00000336216 A0A0J9YXV3 536 aa4.87□□□□□ -1.63
HMG20A-201ENST00000336216 TRBV6-1A0A0K0K1D8 114 aa4.87□□□□□ -1.63
HMG20A-201ENST00000336216 GATD1Q8NB37 220 aa4.87□□□□□ -1.63
HMG20A-201ENST00000336216 I3L3M4 83 aa4.87□□□□□ -1.63
HMG20A-201ENST00000336216 NXPH4O95158 308 aa4.87□□□□□ -1.63
HMG20A-201ENST00000336216 DNAL4O96015 105 aa4.87□□□□□ -1.63
HMG20A-201ENST00000336216 C6orf226Q5I0X4 101 aa4.87□□□□□ -1.63
HMG20A-201ENST00000336216 C15orf53Q8NAA6 179 aa4.87□□□□□ -1.63
HMG20A-201ENST00000336216 RBAKDNA6NC62 111 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 MRPS12O15235 138 aaKnown RBP4.86□□□□□ -1.63
HMG20A-201ENST00000336216 RS1O15537 224 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 PAX4O43316 350 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 C9orf47Q6ZRZ4 202 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 NFE4Q86UQ8 179 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 RASL10AQ92737 203 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 CRYBG3Q68DQ2 2970 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 ZANQ9Y493 2812 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 EBI3Q14213 229 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 PRR9Q5T870 116 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 NDUFA11Q86Y39 141 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 MUSTN1Q8IVN3 82 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 C10orf126Q8N4M7 172 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 DAND5Q8N907 189 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 NRACQ8N912 160 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 MRAPQ8TCY5 172 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 SPATA25Q9BR10 227 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 CSMD1Q96PZ7 3565 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 SVEP1Q4LDE5 3571 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 TRBV7-3A0A075B6L6 115 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 CFC1BP0CG36 223 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 CFC1P0CG37 223 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 IGHV4-31P0DP07 118 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 PROK1P58294 105 aa4.86□□□□□ -1.63
HMG20A-201ENST00000336216 MORN3Q6PF18 240 aaPredicted RBP4.86□□□□□ -1.63
HMG20A-201ENST00000336216 M0R2P5 195 aa4.85□□□□□ -1.63
HMG20A-201ENST00000336216 GPHB5Q86YW7 130 aa4.85□□□□□ -1.63
HMG20A-201ENST00000336216 WFDC10AQ9H1F0 79 aa4.85□□□□□ -1.63
HMG20A-201ENST00000336216 DNAJC9-AS1A6NH13 148 aa4.85□□□□□ -1.63
HMG20A-201ENST00000336216 H3BUA1 57 aa4.85□□□□□ -1.63
HMG20A-201ENST00000336216 ATXN8Q156A1 80 aa4.85□□□□□ -1.63
HMG20A-201ENST00000336216 CFAP126Q5VTH2 177 aa4.85□□□□□ -1.63
HMG20A-201ENST00000336216 Q8N6K4 173 aa4.85□□□□□ -1.63
HMG20A-201ENST00000336216 IGLV10-54A0A075B6I4 117 aa4.85□□□□□ -1.63
HMG20A-201ENST00000336216 A0A0J9YX75 114 aa4.85□□□□□ -1.63
HMG20A-201ENST00000336216 TEX49A0A1B0GTD5 131 aa4.85□□□□□ -1.63
HMG20A-201ENST00000336216 IGHG4P01861 327 aa4.85□□□□□ -1.63
HMG20A-201ENST00000336216 TOMM6Q96B49 74 aa4.85□□□□□ -1.63
HMG20A-201ENST00000336216 COL6A5A8TX70 2615 aa4.85□□□□□ -1.63
HMG20A-201ENST00000336216 UTP20O75691 2785 aaKnown RBP4.84□□□□□ -1.63
HMG20A-201ENST00000336216 IFITM1P13164 125 aa4.84□□□□□ -1.63
HMG20A-201ENST00000336216 CFAP161Q6P656 301 aa4.84□□□□□ -1.63
HMG20A-201ENST00000336216 NEXN-AS1Q8NBZ9 246 aa4.84□□□□□ -1.63
HMG20A-201ENST00000336216 F8W735 103 aaPredicted RBP4.84□□□□□ -1.63
HMG20A-201ENST00000336216 H3BMM0 161 aa4.84□□□□□ -1.63
HMG20A-201ENST00000336216 CRIP2P52943 208 aaPredicted RBP4.84□□□□□ -1.63
HMG20A-201ENST00000336216 C5orf38Q86SI9 138 aa4.84□□□□□ -1.63
HMG20A-201ENST00000336216 UBE2WQ96B02 151 aa4.84□□□□□ -1.63
HMG20A-201ENST00000336216 NDUFA12Q9UI09 145 aa4.84□□□□□ -1.63
HMG20A-201ENST00000336216 LENEPQ9Y5L5 61 aa4.84□□□□□ -1.63
HMG20A-201ENST00000336216 ZFAND2AQ8N6M9 145 aa4.84□□□□□ -1.64
HMG20A-201ENST00000336216 TRAV12-1A0A0B4J245 112 aa4.83□□□□□ -1.64
HMG20A-201ENST00000336216 CLPSL1A2RUU4 121 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms