RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 DOPEY2Q9Y3R5 2298 aa12.01□□□□□ -0.49
UPK3B-202ENST00000334348 BRI3O95415 125 aa12.01□□□□□ -0.49
UPK3B-202ENST00000334348 ID1P41134 155 aa12.01□□□□□ -0.49
UPK3B-202ENST00000334348 HERV-K104P63124 156 aa12.01□□□□□ -0.49
UPK3B-202ENST00000334348 MRPS36P82909 103 aaKnown RBP12.01□□□□□ -0.49
UPK3B-202ENST00000334348 PYGO1Q9Y3Y4 419 aa12.01□□□□□ -0.49
UPK3B-202ENST00000334348 LST1O00453 97 aa12□□□□□ -0.49
UPK3B-202ENST00000334348 IGHV3-11P01762 117 aa12□□□□□ -0.49
UPK3B-202ENST00000334348 IGHV1-58A0A0C4DH39 117 aa12□□□□□ -0.49
UPK3B-202ENST00000334348 H3BUA1 57 aa12□□□□□ -0.49
UPK3B-202ENST00000334348 MIAQ16674 131 aa12□□□□□ -0.49
UPK3B-202ENST00000334348 MEIG1Q5JSS6 88 aa12□□□□□ -0.49
UPK3B-202ENST00000334348 FBN2P35556 2912 aa12□□□□□ -0.49
UPK3B-202ENST00000334348 TRBV7-7A0A0K0K1E9 115 aa11.99□□□□□ -0.49
UPK3B-202ENST00000334348 DAZ1Q9NQZ3 744 aaKnown RBP11.99□□□□□ -0.49
UPK3B-202ENST00000334348 SHISA2Q6UWI4 295 aa11.99□□□□□ -0.49
UPK3B-202ENST00000334348 CLEC2BQ92478 149 aa11.99□□□□□ -0.49
UPK3B-202ENST00000334348 DUX3Q96PT4 197 aa11.99□□□□□ -0.49
UPK3B-202ENST00000334348 NDUFA12Q9UI09 145 aa11.99□□□□□ -0.49
UPK3B-202ENST00000334348 TRAV8-3A0A0A6YYJ7 113 aa11.98□□□□□ -0.49
UPK3B-202ENST00000334348 CFAP161Q6P656 301 aa11.98□□□□□ -0.49
UPK3B-202ENST00000334348 DCANP1Q8TF63 244 aa11.98□□□□□ -0.49
UPK3B-202ENST00000334348 FAM104AQ969W3 186 aa11.98□□□□□ -0.49
UPK3B-202ENST00000334348 PTPN13Q12923 2485 aa11.98□□□□□ -0.49
UPK3B-202ENST00000334348 CD28P10747 220 aa11.98□□□□□ -0.49
UPK3B-202ENST00000334348 TMEM61Q8N0U2 210 aa11.97□□□□□ -0.49
UPK3B-202ENST00000334348 LMO4P61968 165 aa11.97□□□□□ -0.49
UPK3B-202ENST00000334348 YAE1D1Q9NRH1 226 aa11.97□□□□□ -0.49
UPK3B-202ENST00000334348 TRGV11A0A075B6L2 103 aa11.96□□□□□ -0.49
UPK3B-202ENST00000334348 C19orf84I3L1E1 186 aa11.96□□□□□ -0.49
UPK3B-202ENST00000334348 Q6ZSV7 163 aa11.96□□□□□ -0.49
UPK3B-202ENST00000334348 VSIG2Q96IQ7 327 aa11.96□□□□□ -0.49
UPK3B-202ENST00000334348 CHCHD5Q9BSY4 110 aa11.96□□□□□ -0.5
UPK3B-202ENST00000334348 AKAP6Q13023 2319 aa11.95□□□□□ -0.5
UPK3B-202ENST00000334348 IGHV1OR15-1A0A075B7D0 117 aa11.95□□□□□ -0.5
UPK3B-202ENST00000334348 J3QKU1 62 aa11.95□□□□□ -0.5
UPK3B-202ENST00000334348 K7EMT4 169 aa11.95□□□□□ -0.5
UPK3B-202ENST00000334348 ABCA12Q86UK0 2595 aa11.95□□□□□ -0.5
UPK3B-202ENST00000334348 TRAV12-2A0A075B6T6 113 aa11.94□□□□□ -0.5
UPK3B-202ENST00000334348 PF4V1P10720 104 aa11.94□□□□□ -0.5
UPK3B-202ENST00000334348 TINCRA0A1B0GVN0 87 aa11.94□□□□□ -0.5
UPK3B-202ENST00000334348 TIMM17BO60830 172 aa11.94□□□□□ -0.5
UPK3B-202ENST00000334348 TMEM126AQ9H061 195 aa11.94□□□□□ -0.5
UPK3B-202ENST00000334348 IGHG2P01859 326 aa11.93□□□□□ -0.5
UPK3B-202ENST00000334348 EDN2P20800 178 aa11.93□□□□□ -0.5
UPK3B-202ENST00000334348 TMEM101Q96IK0 257 aa11.93□□□□□ -0.5
UPK3B-202ENST00000334348 EDA2RQ9HAV5 297 aa11.93□□□□□ -0.5
UPK3B-202ENST00000334348 MED13LQ71F56 2210 aa11.93□□□□□ -0.5
UPK3B-202ENST00000334348 POLQO75417 2590 aa11.93□□□□□ -0.5
UPK3B-202ENST00000334348 ACYP1P07311 99 aa11.93□□□□□ -0.5
UPK3B-202ENST00000334348 NPC2P61916 151 aa11.93□□□□□ -0.5
UPK3B-202ENST00000334348 IMUPQ9GZP8 106 aa11.93□□□□□ -0.5
UPK3B-202ENST00000334348 FLNBO75369 2602 aaKnown RBP11.92□□□□□ -0.5
UPK3B-202ENST00000334348 IGHV3OR16-10A0A075B7F0 116 aa11.92□□□□□ -0.5
UPK3B-202ENST00000334348 LINC01587Q99440 93 aa11.92□□□□□ -0.5
UPK3B-202ENST00000334348 BPESC1Q9GZL8 116 aa11.92□□□□□ -0.5
UPK3B-202ENST00000334348 ITPR2Q14571 2701 aa11.92□□□□□ -0.5
UPK3B-202ENST00000334348 SVEP1Q4LDE5 3571 aa11.91□□□□□ -0.5
UPK3B-202ENST00000334348 SPG11Q96JI7 2443 aa11.91□□□□□ -0.5
UPK3B-202ENST00000334348 CEMP1Q6PRD7 247 aaPredicted RBP11.91□□□□□ -0.5
UPK3B-202ENST00000334348 A0A1W2PPR1 153 aa11.91□□□□□ -0.5
UPK3B-202ENST00000334348 A8MZ25 164 aa11.91□□□□□ -0.5
UPK3B-202ENST00000334348 IGKV3-20P01619 116 aa11.91□□□□□ -0.5
UPK3B-202ENST00000334348 APCP25054 2843 aa11.9□□□□□ -0.5
UPK3B-202ENST00000334348 IGLV1-40P01703 118 aa11.9□□□□□ -0.51
UPK3B-202ENST00000334348 RNASE13Q5GAN3 156 aaKnown RBP11.9□□□□□ -0.51
UPK3B-202ENST00000334348 UBTD1Q9HAC8 227 aa11.89□□□□□ -0.51
UPK3B-202ENST00000334348 SPINK13Q1W4C9 94 aa11.89□□□□□ -0.51
UPK3B-202ENST00000334348 HIST2H2BCQ6DN03 193 aa11.89□□□□□ -0.51
UPK3B-202ENST00000334348 PRRC2AP48634 2157 aaKnown RBP11.88□□□□□ -0.51
UPK3B-202ENST00000334348 SNRPD3P62318 126 aaKnown RBP11.88□□□□□ -0.51
UPK3B-202ENST00000334348 LY6EQ16553 131 aa11.88□□□□□ -0.51
UPK3B-202ENST00000334348 BRD3OSQ6XYD6 125 aa11.88□□□□□ -0.51
UPK3B-202ENST00000334348 CITED2Q99967 270 aaPredicted RBP11.88□□□□□ -0.51
UPK3B-202ENST00000334348 SETXQ7Z333 2677 aaKnown RBP11.88□□□□□ -0.51
UPK3B-202ENST00000334348 FAM236AA0A1B0GUQ0 79 aa11.87□□□□□ -0.51
UPK3B-202ENST00000334348 FAM236BA0A1B0GV22 79 aa11.87□□□□□ -0.51
UPK3B-202ENST00000334348 TNFRSF18Q9Y5U5 241 aa11.87□□□□□ -0.51
UPK3B-202ENST00000334348 UBE2D4Q9Y2X8 147 aa11.87□□□□□ -0.51
UPK3B-202ENST00000334348 CHCHD7Q9BUK0 85 aa11.86□□□□□ -0.51
UPK3B-202ENST00000334348 UNC79Q9P2D8 2635 aa11.86□□□□□ -0.51
UPK3B-202ENST00000334348 BAHCC1Q9P281 2608 aa11.86□□□□□ -0.51
UPK3B-202ENST00000334348 NDUFA1O15239 70 aa11.86□□□□□ -0.51
UPK3B-202ENST00000334348 BLCAPP62952 87 aa11.86□□□□□ -0.51
UPK3B-202ENST00000334348 RNF152Q8N8N0 203 aa11.86□□□□□ -0.51
UPK3B-202ENST00000334348 A6NDX4 124 aa11.85□□□□□ -0.51
UPK3B-202ENST00000334348 DAND5Q8N907 189 aa11.85□□□□□ -0.51
UPK3B-202ENST00000334348 IGHV3-73A0A0B4J1V6 119 aa11.85□□□□□ -0.51
UPK3B-202ENST00000334348 K7EQG2 157 aa11.85□□□□□ -0.51
UPK3B-202ENST00000334348 COX7A2LO14548 114 aa11.85□□□□□ -0.51
UPK3B-202ENST00000334348 PROK1P58294 105 aa11.85□□□□□ -0.51
UPK3B-202ENST00000334348 LINC00643Q86TS7 51 aa11.85□□□□□ -0.51
UPK3B-202ENST00000334348 CIRBPQ14011 172 aaKnown RBP11.84□□□□□ -0.51
UPK3B-202ENST00000334348 DUX5Q96PT3 197 aa11.84□□□□□ -0.51
UPK3B-202ENST00000334348 CFHR3Q02985 330 aa11.84□□□□□ -0.51
UPK3B-202ENST00000334348 C3orf56Q8N813 242 aa11.84□□□□□ -0.51
UPK3B-202ENST00000334348 H3BUX3 64 aa11.83□□□□□ -0.52
UPK3B-202ENST00000334348 LINC00308Q8TCZ7 52 aa11.83□□□□□ -0.52
UPK3B-202ENST00000334348 SMCR5Q8TEV8 140 aa11.83□□□□□ -0.52
UPK3B-202ENST00000334348 TIRAPP58753 221 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms