RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ZFP2Q6ZN57 461 aa8.89□□□□□ -0.99
HDAC6-201ENST00000334136 I3L3M4 83 aa8.89□□□□□ -0.99
HDAC6-201ENST00000334136 GAS8-AS1O95177 125 aa8.89□□□□□ -0.99
HDAC6-201ENST00000334136 INSL3P51460 131 aa8.89□□□□□ -0.99
HDAC6-201ENST00000334136 GAGE5Q13069 117 aa8.89□□□□□ -0.99
HDAC6-201ENST00000334136 GAGE6Q13070 117 aa8.89□□□□□ -0.99
HDAC6-201ENST00000334136 C18orf65Q6ZTR6 163 aa8.89□□□□□ -0.99
HDAC6-201ENST00000334136 C16orf95Q9H693 158 aa8.89□□□□□ -0.99
HDAC6-201ENST00000334136 AGRNO00468 2067 aa8.89□□□□□ -0.99
HDAC6-201ENST00000334136 MAST4O15021 2626 aa8.89□□□□□ -0.99
HDAC6-201ENST00000334136 TMEM61Q8N0U2 210 aa8.88□□□□□ -0.99
HDAC6-201ENST00000334136 ANKRD29Q8N6D5 301 aa8.88□□□□□ -0.99
HDAC6-201ENST00000334136 CRPP02741 224 aa8.88□□□□□ -0.99
HDAC6-201ENST00000334136 CRIP2P52943 208 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-201ENST00000334136 C9orf153Q5TBE3 101 aa8.88□□□□□ -0.99
HDAC6-201ENST00000334136 BAALCQ8WXS3 180 aa8.88□□□□□ -0.99
HDAC6-201ENST00000334136 XCL2Q9UBD3 114 aa8.88□□□□□ -0.99
HDAC6-201ENST00000334136 RBAKDNA6NC62 111 aa8.88□□□□□ -0.99
HDAC6-201ENST00000334136 IGLV2-11P01706 119 aa8.88□□□□□ -0.99
HDAC6-201ENST00000334136 SMIM20Q8N5G0 67 aa8.88□□□□□ -0.99
HDAC6-201ENST00000334136 JPT2Q9H910 190 aa8.88□□□□□ -0.99
HDAC6-201ENST00000334136 IGHV1OR15-1A0A075B7D0 117 aa8.87□□□□□ -0.99
HDAC6-201ENST00000334136 MUSTN1Q8IVN3 82 aa8.87□□□□□ -0.99
HDAC6-201ENST00000334136 TRGV4A0A0C4DH28 118 aa8.87□□□□□ -0.99
HDAC6-201ENST00000334136 SPANXB1Q9NS25 103 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-201ENST00000334136 TRAV25A0A0B4J276 109 aa8.87□□□□□ -0.99
HDAC6-201ENST00000334136 RBMY1BA6NDE4 496 aaKnown RBP8.87□□□□□ -0.99
HDAC6-201ENST00000334136 RBMY1EA6NEQ0 496 aaKnown RBP8.87□□□□□ -0.99
HDAC6-201ENST00000334136 E9PLD3 99 aa8.87□□□□□ -0.99
HDAC6-201ENST00000334136 RBMY1DP0C7P1 496 aaKnown RBP8.87□□□□□ -0.99
HDAC6-201ENST00000334136 RBMY1A1P0DJD3 496 aaKnown RBP8.87□□□□□ -0.99
HDAC6-201ENST00000334136 RBMY1CP0DJD4 496 aa8.87□□□□□ -0.99
HDAC6-201ENST00000334136 RPL36AP83881 106 aaKnown RBP8.87□□□□□ -0.99
HDAC6-201ENST00000334136 RPL36ALQ969Q0 106 aaKnown RBP8.87□□□□□ -0.99
HDAC6-201ENST00000334136 OPRPNQ99935 248 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-201ENST00000334136 LGALS9O00182 355 aa8.86□□□□□ -0.99
HDAC6-201ENST00000334136 KMT2BQ9UMN6 2715 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-201ENST00000334136 INSP01308 110 aa8.86□□□□□ -0.99
HDAC6-201ENST00000334136 MT-ATP8P03928 68 aa8.86□□□□□ -0.99
HDAC6-201ENST00000334136 ZNF415Q09FC8 603 aa8.86□□□□□ -0.99
HDAC6-201ENST00000334136 RASL10AQ92737 203 aa8.86□□□□□ -0.99
HDAC6-201ENST00000334136 ZNF580Q9UK33 172 aa8.86□□□□□ -0.99
HDAC6-201ENST00000334136 SUMO4Q6EEV6 95 aa8.86□□□□□ -0.99
HDAC6-201ENST00000334136 UBR5O95071 2799 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-201ENST00000334136 IGLC6P0CF74 106 aa8.85□□□□□ -0.99
HDAC6-201ENST00000334136 APRG1Q8IVJ8 170 aa8.85□□□□□ -0.99
HDAC6-201ENST00000334136 DAND5Q8N907 189 aa8.85□□□□□ -0.99
HDAC6-201ENST00000334136 TRBV6-1A0A0K0K1D8 114 aa8.85□□□□□ -0.99
HDAC6-201ENST00000334136 PROK1P58294 105 aa8.85□□□□□ -0.99
HDAC6-201ENST00000334136 HTN3P15516 51 aa8.84□□□□□ -0.99
HDAC6-201ENST00000334136 MRGPRG-AS1Q2M3A8 158 aa8.84□□□□□ -0.99
HDAC6-201ENST00000334136 TM2D2Q9BX73 214 aa8.84□□□□□ -0.99
HDAC6-201ENST00000334136 LAMA5O15230 3695 aa8.84□□□□□ -0.99
HDAC6-201ENST00000334136 UTP20O75691 2785 aaKnown RBP8.84□□□□□ -0.99
HDAC6-201ENST00000334136 PRSS47A8MTI9 375 aa8.84□□□□□ -0.99
HDAC6-201ENST00000334136 TET2Q6N021 2002 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-201ENST00000334136 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-201ENST00000334136 IGKV2-29A2NJV5 120 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-201ENST00000334136 LEPROTO15243 131 aa8.84□□□□□ -0.99
HDAC6-201ENST00000334136 PFN2P35080 140 aa8.84□□□□□ -0.99
HDAC6-201ENST00000334136 APOC4P55056 127 aa8.84□□□□□ -0.99
HDAC6-201ENST00000334136 KRTAP1-1Q07627 177 aa8.84□□□□□ -0.99
HDAC6-201ENST00000334136 RNF183Q96D59 192 aa8.83□□□□□ -1
HDAC6-201ENST00000334136 TEX15Q9BXT5 2789 aa8.83□□□□□ -1
HDAC6-201ENST00000334136 TCL1BO95988 128 aa8.83□□□□□ -1
HDAC6-201ENST00000334136 LINC01620Q4KN68 170 aa8.83□□□□□ -1
HDAC6-201ENST00000334136 ZNRF2Q8NHG8 242 aa8.83□□□□□ -1
HDAC6-201ENST00000334136 ZFAND3Q9H8U3 227 aa8.83□□□□□ -1
HDAC6-201ENST00000334136 DEFB114Q30KQ6 69 aa8.83□□□□□ -1
HDAC6-201ENST00000334136 TOMM6Q96B49 74 aa8.83□□□□□ -1
HDAC6-201ENST00000334136 LENEPQ9Y5L5 61 aa8.83□□□□□ -1
HDAC6-201ENST00000334136 TRAV12-1A0A0B4J245 112 aa8.83□□□□□ -1
HDAC6-201ENST00000334136 CFHR3Q02985 330 aa8.83□□□□□ -1
HDAC6-201ENST00000334136 Q8N2B8 174 aa8.83□□□□□ -1
HDAC6-201ENST00000334136 LRBAP50851 2863 aa8.82□□□□□ -1
HDAC6-201ENST00000334136 C6orf226Q5I0X4 101 aa8.82□□□□□ -1
HDAC6-201ENST00000334136 MRAPQ8TCY5 172 aa8.82□□□□□ -1
HDAC6-201ENST00000334136 Q6ZUT4 128 aa8.82□□□□□ -1
HDAC6-201ENST00000334136 RNF185Q96GF1 192 aa8.82□□□□□ -1
HDAC6-201ENST00000334136 BRI3O95415 125 aa8.81□□□□□ -1
HDAC6-201ENST00000334136 APCP25054 2843 aa8.81□□□□□ -1
HDAC6-201ENST00000334136 CFAP161Q6P656 301 aa8.81□□□□□ -1
HDAC6-201ENST00000334136 MRPL53Q96EL3 112 aaKnown RBP8.81□□□□□ -1
HDAC6-201ENST00000334136 C9orf47Q6ZRZ4 202 aa8.81□□□□□ -1
HDAC6-201ENST00000334136 CR1P17927 2039 aa8.81□□□□□ -1
HDAC6-201ENST00000334136 KRTAP24-1Q3LI83 254 aa8.8□□□□□ -1
HDAC6-201ENST00000334136 Q9H8V8 135 aa8.8□□□□□ -1
HDAC6-201ENST00000334136 MALP21145 153 aa8.8□□□□□ -1
HDAC6-201ENST00000334136 CLEC2BQ92478 149 aa8.8□□□□□ -1
HDAC6-201ENST00000334136 CEMP1Q6PRD7 247 aaPredicted RBP8.79□□□□□ -1
HDAC6-201ENST00000334136 SMAD5-AS1Q9Y6J3 95 aa8.79□□□□□ -1
HDAC6-201ENST00000334136 UFSP1Q6NVU6 142 aa8.79□□□□□ -1
HDAC6-201ENST00000334136 Q8N1Y9 231 aa8.79□□□□□ -1
HDAC6-201ENST00000334136 CLUHP3Q96NS8 147 aa8.79□□□□□ -1
HDAC6-201ENST00000334136 MDFICQ9P1T7 246 aa8.78□□□□□ -1
HDAC6-201ENST00000334136 Q6ZQT7 251 aa8.78□□□□□ -1
HDAC6-201ENST00000334136 TINCRA0A1B0GVN0 87 aa8.78□□□□□ -1
HDAC6-201ENST00000334136 S100A7L2Q5SY68 101 aa8.78□□□□□ -1
HDAC6-201ENST00000334136 C11orf21Q9P2W6 132 aa8.78□□□□□ -1
HDAC6-201ENST00000334136 U3KQK5 164 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms