RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 TRBV10-2A0A0K0K1G8 114 aa17.35■□□□□ 0.37
TSKU-201ENST00000333090 ADAMTSL4-AS1Q5T5F5 129 aa17.35■□□□□ 0.37
TSKU-201ENST00000333090 PROK1P58294 105 aa17.34■□□□□ 0.37
TSKU-201ENST00000333090 K7EQG2 157 aa17.34■□□□□ 0.37
TSKU-201ENST00000333090 FAM104AQ969W3 186 aa17.34■□□□□ 0.37
TSKU-201ENST00000333090 MRPS36P82909 103 aaKnown RBP17.34■□□□□ 0.37
TSKU-201ENST00000333090 NDUFA12Q9UI09 145 aa17.34■□□□□ 0.37
TSKU-201ENST00000333090 A8MZ25 164 aa17.33■□□□□ 0.36
TSKU-201ENST00000333090 Q6ZSV7 163 aa17.33■□□□□ 0.36
TSKU-201ENST00000333090 ICOSQ9Y6W8 199 aa17.33■□□□□ 0.36
TSKU-201ENST00000333090 FAM208BQ5VWN6 2430 aa17.32■□□□□ 0.36
TSKU-201ENST00000333090 TRAV8-4A0A0B4J246 113 aa17.32■□□□□ 0.36
TSKU-201ENST00000333090 PSMB8P28062 276 aa17.32■□□□□ 0.36
TSKU-201ENST00000333090 IGHV1-58A0A0C4DH39 117 aa17.32■□□□□ 0.36
TSKU-201ENST00000333090 H3BMM0 161 aa17.32■□□□□ 0.36
TSKU-201ENST00000333090 UBE2WQ96B02 151 aa17.32■□□□□ 0.36
TSKU-201ENST00000333090 PYGO1Q9Y3Y4 419 aa17.32■□□□□ 0.36
TSKU-201ENST00000333090 FBN2P35556 2912 aa17.31■□□□□ 0.36
TSKU-201ENST00000333090 TRGV11A0A075B6L2 103 aa17.31■□□□□ 0.36
TSKU-201ENST00000333090 NHLRC4P0CG21 123 aaPredicted RBP17.31■□□□□ 0.36
TSKU-201ENST00000333090 C2orf82Q6UX34 121 aa17.31■□□□□ 0.36
TSKU-201ENST00000333090 RPL13AP40429 203 aaKnown RBP17.31■□□□□ 0.36
TSKU-201ENST00000333090 SS18L2Q9UHA2 77 aa17.31■□□□□ 0.36
TSKU-201ENST00000333090 SYNJ2BPP57105 145 aa17.3■□□□□ 0.36
TSKU-201ENST00000333090 DUX5Q96PT3 197 aa17.3■□□□□ 0.36
TSKU-201ENST00000333090 DOPEY1Q5JWR5 2465 aa17.3■□□□□ 0.36
TSKU-201ENST00000333090 GAGE5Q13069 117 aa17.3■□□□□ 0.36
TSKU-201ENST00000333090 GAGE6Q13070 117 aa17.3■□□□□ 0.36
TSKU-201ENST00000333090 IGHV4-30-2A0A087WSY4 118 aa17.29■□□□□ 0.36
TSKU-201ENST00000333090 KNCNA6PVL3 124 aa17.29■□□□□ 0.36
TSKU-201ENST00000333090 TNFRSF18Q9Y5U5 241 aa17.29■□□□□ 0.36
TSKU-201ENST00000333090 Q9UF83 564 aa17.29■□□□□ 0.36
TSKU-201ENST00000333090 B5MCH6 92 aa17.28■□□□□ 0.36
TSKU-201ENST00000333090 RBMY1A1P0DJD3 496 aaKnown RBP17.28■□□□□ 0.36
TSKU-201ENST00000333090 RBMY1CP0DJD4 496 aa17.28■□□□□ 0.36
TSKU-201ENST00000333090 NDUFV3P56181 108 aaKnown RBP17.28■□□□□ 0.36
TSKU-201ENST00000333090 RBMY1FQ15415 496 aaKnown RBP17.28■□□□□ 0.36
TSKU-201ENST00000333090 C10orf105Q8TEF2 133 aa17.28■□□□□ 0.36
TSKU-201ENST00000333090 CCL19Q99731 98 aa17.28■□□□□ 0.36
TSKU-201ENST00000333090 H7C423 109 aa17.27■□□□□ 0.36
TSKU-201ENST00000333090 COX6CP09669 75 aa17.27■□□□□ 0.36
TSKU-201ENST00000333090 CLEC2BQ92478 149 aa17.27■□□□□ 0.36
TSKU-201ENST00000333090 VSIG2Q96IQ7 327 aa17.27■□□□□ 0.36
TSKU-201ENST00000333090 SPANXDQ9BXN6 97 aa17.27■□□□□ 0.36
TSKU-201ENST00000333090 SPANXCQ9NY87 97 aa17.27■□□□□ 0.36
TSKU-201ENST00000333090 AVPP01185 164 aa17.27■□□□□ 0.36
TSKU-201ENST00000333090 PRM2P04554 102 aa17.27■□□□□ 0.36
TSKU-201ENST00000333090 MIAQ16674 131 aa17.27■□□□□ 0.36
TSKU-201ENST00000333090 TTC32Q5I0X7 151 aa17.27■□□□□ 0.36
TSKU-201ENST00000333090 C15orf53Q8NAA6 179 aa17.27■□□□□ 0.35
TSKU-201ENST00000333090 MSMBP08118 114 aa17.26■□□□□ 0.35
TSKU-201ENST00000333090 SVIPQ8NHG7 77 aa17.26■□□□□ 0.35
TSKU-201ENST00000333090 LINC01600Q96MT4 127 aa17.26■□□□□ 0.35
TSKU-201ENST00000333090 LRRK2Q5S007 2527 aa17.25■□□□□ 0.35
TSKU-201ENST00000333090 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.25■□□□□ 0.35
TSKU-201ENST00000333090 IGKV2-29A2NJV5 120 aaPredicted RBP17.25■□□□□ 0.35
TSKU-201ENST00000333090 ATP5J2P56134 94 aa17.25■□□□□ 0.35
TSKU-201ENST00000333090 IGHV4-59P01825 116 aa17.24■□□□□ 0.35
TSKU-201ENST00000333090 IFITM1P13164 125 aa17.24■□□□□ 0.35
TSKU-201ENST00000333090 DAND5Q8N907 189 aa17.24■□□□□ 0.35
TSKU-201ENST00000333090 MAPK1IP1LQ8NDC0 245 aa17.24■□□□□ 0.35
TSKU-201ENST00000333090 TINCRA0A1B0GVN0 87 aa17.23■□□□□ 0.35
TSKU-201ENST00000333090 MXRA5Q9NR99 2828 aa17.23■□□□□ 0.35
TSKU-201ENST00000333090 TMEM61Q8N0U2 210 aa17.22■□□□□ 0.35
TSKU-201ENST00000333090 UBE2D4Q9Y2X8 147 aa17.22■□□□□ 0.35
TSKU-201ENST00000333090 Q6ZSN1 163 aa17.21■□□□□ 0.35
TSKU-201ENST00000333090 CHCHD7Q9BUK0 85 aa17.21■□□□□ 0.35
TSKU-201ENST00000333090 ZNF462Q96JM2 2506 aa17.21■□□□□ 0.35
TSKU-201ENST00000333090 ABCA12Q86UK0 2595 aa17.21■□□□□ 0.35
TSKU-201ENST00000333090 EDA2RQ9HAV5 297 aa17.21■□□□□ 0.35
TSKU-201ENST00000333090 H3BT86 120 aa17.2■□□□□ 0.34
TSKU-201ENST00000333090 IGHV3-38A0A0C4DH36 116 aa17.2■□□□□ 0.34
TSKU-201ENST00000333090 DUX3Q96PT4 197 aa17.2■□□□□ 0.34
TSKU-201ENST00000333090 SPANXA1Q9NS26 97 aa17.2■□□□□ 0.34
TSKU-201ENST00000333090 LINC00467Q9BRT7 94 aa17.19■□□□□ 0.34
TSKU-201ENST00000333090 CCDC179H3BU77 68 aa17.19■□□□□ 0.34
TSKU-201ENST00000333090 LST1O00453 97 aa17.19■□□□□ 0.34
TSKU-201ENST00000333090 Q6Q795 121 aa17.19■□□□□ 0.34
TSKU-201ENST00000333090 NACAE9PAV3 2078 aa17.18■□□□□ 0.34
TSKU-201ENST00000333090 YAE1D1Q9NRH1 226 aa17.18■□□□□ 0.34
TSKU-201ENST00000333090 ANKRD17O75179 2603 aaKnown RBP17.18■□□□□ 0.34
TSKU-201ENST00000333090 GAGE12JA6NER3 117 aa17.18■□□□□ 0.34
TSKU-201ENST00000333090 GAGE7O76087 117 aa17.18■□□□□ 0.34
TSKU-201ENST00000333090 GAGE12FP0CL80 117 aa17.18■□□□□ 0.34
TSKU-201ENST00000333090 GAGE12GP0CL81 117 aa17.18■□□□□ 0.34
TSKU-201ENST00000333090 GAGE12IP0CL82 117 aa17.18■□□□□ 0.34
TSKU-201ENST00000333090 HOXD3P31249 432 aaPredicted RBP17.18■□□□□ 0.34
TSKU-201ENST00000333090 GAGE4Q13068 117 aa17.18■□□□□ 0.34
TSKU-201ENST00000333090 DEFB112Q30KQ8 113 aa17.17■□□□□ 0.34
TSKU-201ENST00000333090 CDKN2A-AS1Q9UH64 79 aa17.17■□□□□ 0.34
TSKU-201ENST00000333090 DEFB131AP59861 70 aa17.17■□□□□ 0.34
TSKU-201ENST00000333090 PTPN13Q12923 2485 aa17.16■□□□□ 0.34
TSKU-201ENST00000333090 RNF152Q8N8N0 203 aa17.16■□□□□ 0.34
TSKU-201ENST00000333090 PRB1P04280 392 aa17.15■□□□□ 0.34
TSKU-201ENST00000333090 ZNF469Q96JG9 3925 aaPredicted RBP17.13■□□□□ 0.33
TSKU-201ENST00000333090 B4DSR2 109 aa17.12■□□□□ 0.33
TSKU-201ENST00000333090 A0A0U1RRA0 63 aa17.12■□□□□ 0.33
TSKU-201ENST00000333090 RBMY1BA6NDE4 496 aaKnown RBP17.12■□□□□ 0.33
TSKU-201ENST00000333090 RBMY1EA6NEQ0 496 aaKnown RBP17.12■□□□□ 0.33
TSKU-201ENST00000333090 RBMY1DP0C7P1 496 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms