RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 K7EMI3 77 aa9.31□□□□□ -0.92
DDX39A-202ENST00000324340 RBMY1A1P0DJD3 496 aaKnown RBP9.31□□□□□ -0.92
DDX39A-202ENST00000324340 RBMY1CP0DJD4 496 aa9.31□□□□□ -0.92
DDX39A-202ENST00000324340 FXYD7P58549 80 aa9.31□□□□□ -0.92
DDX39A-202ENST00000324340 RBMY1FQ15415 496 aaKnown RBP9.31□□□□□ -0.92
DDX39A-202ENST00000324340 ANXA2RQ3ZCQ2 193 aa9.31□□□□□ -0.92
DDX39A-202ENST00000324340 OXLD1Q5BKU9 147 aa9.31□□□□□ -0.92
DDX39A-202ENST00000324340 MORN3Q6PF18 240 aaPredicted RBP9.31□□□□□ -0.92
DDX39A-202ENST00000324340 RNF183Q96D59 192 aa9.31□□□□□ -0.92
DDX39A-202ENST00000324340 COL6A5A8TX70 2615 aa9.31□□□□□ -0.92
DDX39A-202ENST00000324340 UBE2D3P61077 147 aa9.3□□□□□ -0.92
DDX39A-202ENST00000324340 UBE2D2P62837 147 aa9.3□□□□□ -0.92
DDX39A-202ENST00000324340 FAM159AQ6UWV7 190 aa9.3□□□□□ -0.92
DDX39A-202ENST00000324340 LINC00467Q9BRT7 94 aa9.3□□□□□ -0.92
DDX39A-202ENST00000324340 VWFP04275 2813 aa9.3□□□□□ -0.92
DDX39A-202ENST00000324340 MYMXA0A1B0GTQ4 84 aa9.29□□□□□ -0.92
DDX39A-202ENST00000324340 RHODO00212 210 aa9.29□□□□□ -0.92
DDX39A-202ENST00000324340 INSP01308 110 aa9.29□□□□□ -0.92
DDX39A-202ENST00000324340 MT-ATP8P03928 68 aa9.29□□□□□ -0.92
DDX39A-202ENST00000324340 GIG44P09565 113 aaPredicted RBP9.29□□□□□ -0.92
DDX39A-202ENST00000324340 MED14OSP0DP75 135 aa9.29□□□□□ -0.92
DDX39A-202ENST00000324340 UBE2D1P51668 147 aa9.29□□□□□ -0.92
DDX39A-202ENST00000324340 MRPL23Q16540 153 aaKnown RBP9.29□□□□□ -0.92
DDX39A-202ENST00000324340 IGHV1OR15-1A0A075B7D0 117 aa9.28□□□□□ -0.92
DDX39A-202ENST00000324340 LINC01549A6NIU2 74 aa9.28□□□□□ -0.92
DDX39A-202ENST00000324340 XGP55808 180 aa9.28□□□□□ -0.92
DDX39A-202ENST00000324340 RNF185Q96GF1 192 aa9.28□□□□□ -0.92
DDX39A-202ENST00000324340 A8MWV9 139 aa9.27□□□□□ -0.93
DDX39A-202ENST00000324340 H7C1H1 209 aa9.27□□□□□ -0.93
DDX39A-202ENST00000324340 GNRH2O43555 120 aa9.27□□□□□ -0.93
DDX39A-202ENST00000324340 TNFRSF6BO95407 300 aa9.27□□□□□ -0.93
DDX39A-202ENST00000324340 RPL35AP18077 110 aaKnown RBP9.27□□□□□ -0.93
DDX39A-202ENST00000324340 SMCPP49901 116 aaPredicted RBP9.27□□□□□ -0.93
DDX39A-202ENST00000324340 KRTAP10-11P60412 298 aa9.27□□□□□ -0.93
DDX39A-202ENST00000324340 STAB1Q9NY15 2570 aa9.27□□□□□ -0.93
DDX39A-202ENST00000324340 IGLV2-18A0A075B6J9 118 aa9.26□□□□□ -0.93
DDX39A-202ENST00000324340 IGHV4-4A0A075B6R2 117 aa9.26□□□□□ -0.93
DDX39A-202ENST00000324340 GAGE12JA6NER3 117 aa9.26□□□□□ -0.93
DDX39A-202ENST00000324340 GAGE7O76087 117 aa9.26□□□□□ -0.93
DDX39A-202ENST00000324340 GAGE12FP0CL80 117 aa9.26□□□□□ -0.93
DDX39A-202ENST00000324340 GAGE12GP0CL81 117 aa9.26□□□□□ -0.93
DDX39A-202ENST00000324340 GAGE12IP0CL82 117 aa9.26□□□□□ -0.93
DDX39A-202ENST00000324340 RNASE3P12724 160 aaKnown RBP9.26□□□□□ -0.93
DDX39A-202ENST00000324340 GAGE4Q13068 117 aa9.26□□□□□ -0.93
DDX39A-202ENST00000324340 C1orf158Q8N1D5 194 aa9.26□□□□□ -0.93
DDX39A-202ENST00000324340 CSNK1G2-AS1Q8NCQ2 148 aa9.26□□□□□ -0.93
DDX39A-202ENST00000324340 XCL2Q9UBD3 114 aa9.26□□□□□ -0.93
DDX39A-202ENST00000324340 TRGV11A0A075B6L2 103 aa9.25□□□□□ -0.93
DDX39A-202ENST00000324340 IGHV3-16A0A0C4DH30 117 aa9.25□□□□□ -0.93
DDX39A-202ENST00000324340 F8VRH5 84 aa9.25□□□□□ -0.93
DDX39A-202ENST00000324340 LAGE3Q14657 143 aa9.25□□□□□ -0.93
DDX39A-202ENST00000324340 NFE4Q86UQ8 179 aa9.25□□□□□ -0.93
DDX39A-202ENST00000324340 MAPKAPK5-AS1Q8N8E1 139 aa9.25□□□□□ -0.93
DDX39A-202ENST00000324340 C9orf85Q96MD7 179 aa9.25□□□□□ -0.93
DDX39A-202ENST00000324340 TPPP3Q9BW30 176 aa9.25□□□□□ -0.93
DDX39A-202ENST00000324340 A8MZ25 164 aa9.24□□□□□ -0.93
DDX39A-202ENST00000324340 H3BVH4 76 aa9.24□□□□□ -0.93
DDX39A-202ENST00000324340 KIR2DL5BQ8NHK3 375 aa9.24□□□□□ -0.93
DDX39A-202ENST00000324340 CARD19Q96LW7 228 aa9.24□□□□□ -0.93
DDX39A-202ENST00000324340 LINC01587Q99440 93 aa9.24□□□□□ -0.93
DDX39A-202ENST00000324340 MRPL35Q9NZE8 188 aaKnown RBP9.24□□□□□ -0.93
DDX39A-202ENST00000324340 NXPH4O95158 308 aa9.24□□□□□ -0.93
DDX39A-202ENST00000324340 S100A4P26447 101 aaKnown RBP9.24□□□□□ -0.93
DDX39A-202ENST00000324340 PAPPA-AS1Q5QFB9 102 aa9.24□□□□□ -0.93
DDX39A-202ENST00000324340 SPANXCQ9NY87 97 aa9.24□□□□□ -0.93
DDX39A-202ENST00000324340 IGHV4-30-4P0DP06 118 aa9.23□□□□□ -0.93
DDX39A-202ENST00000324340 GAGE2BQ13066 116 aa9.23□□□□□ -0.93
DDX39A-202ENST00000324340 GAGE2EQ4V326 116 aa9.23□□□□□ -0.93
DDX39A-202ENST00000324340 MDFICQ9P1T7 246 aa9.23□□□□□ -0.93
DDX39A-202ENST00000324340 GAGE2DQ9UEU5 116 aa9.23□□□□□ -0.93
DDX39A-202ENST00000324340 SS18L2Q9UHA2 77 aa9.23□□□□□ -0.93
DDX39A-202ENST00000324340 PRSS29PA6NIE9 313 aa9.22□□□□□ -0.93
DDX39A-202ENST00000324340 SCGB1C2P0DMR2 95 aa9.22□□□□□ -0.93
DDX39A-202ENST00000324340 APOC4P55056 127 aa9.22□□□□□ -0.93
DDX39A-202ENST00000324340 NDUFV3P56181 108 aaKnown RBP9.22□□□□□ -0.93
DDX39A-202ENST00000324340 ORMDL2Q53FV1 153 aa9.22□□□□□ -0.93
DDX39A-202ENST00000324340 KPRPQ5T749 579 aaPredicted RBP9.22□□□□□ -0.93
DDX39A-202ENST00000324340 C11orf72Q8NBR9 251 aa9.22□□□□□ -0.93
DDX39A-202ENST00000324340 TMEM126AQ9H061 195 aa9.22□□□□□ -0.93
DDX39A-202ENST00000324340 PHLDA3Q9Y5J5 127 aa9.22□□□□□ -0.93
DDX39A-202ENST00000324340 TRRAPQ9Y4A5 3859 aa9.21□□□□□ -0.94
DDX39A-202ENST00000324340 NHLRC4P0CG21 123 aaPredicted RBP9.21□□□□□ -0.94
DDX39A-202ENST00000324340 SPANXN1Q5VSR9 72 aa9.21□□□□□ -0.94
DDX39A-202ENST00000324340 PTH2Q96A98 100 aa9.21□□□□□ -0.94
DDX39A-202ENST00000324340 TTTY13Q9BZ97 58 aa9.21□□□□□ -0.94
DDX39A-202ENST00000324340 MSRB1Q9NZV6 116 aa9.21□□□□□ -0.94
DDX39A-202ENST00000324340 TNFRSF18Q9Y5U5 241 aa9.21□□□□□ -0.94
DDX39A-202ENST00000324340 NOTCH3Q9UM47 2321 aa9.2□□□□□ -0.94
DDX39A-202ENST00000324340 SNCGO76070 127 aa9.2□□□□□ -0.94
DDX39A-202ENST00000324340 PRM2P04554 102 aa9.2□□□□□ -0.94
DDX39A-202ENST00000324340 IFITM1P13164 125 aa9.2□□□□□ -0.94
DDX39A-202ENST00000324340 PSMB2P49721 201 aa9.2□□□□□ -0.94
DDX39A-202ENST00000324340 ZNF415Q09FC8 603 aa9.2□□□□□ -0.94
DDX39A-202ENST00000324340 B5MCH6 92 aa9.19□□□□□ -0.94
DDX39A-202ENST00000324340 SMKR1H3BMG3 65 aa9.19□□□□□ -0.94
DDX39A-202ENST00000324340 P0DMU3 169 aa9.19□□□□□ -0.94
DDX39A-202ENST00000324340 FAM231AP0DMU4 169 aa9.19□□□□□ -0.94
DDX39A-202ENST00000324340 FAM231CP0DMU5 169 aa9.19□□□□□ -0.94
DDX39A-202ENST00000324340 HTN1P15515 57 aa9.19□□□□□ -0.94
DDX39A-202ENST00000324340 RPL13AP40429 203 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms