RNA–Protein interactions for RNA: ENST00000317991.9

GRAMD1A-201, Transcript of GRAM domain containing 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GRAMD1A, Length 2,695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-201ENST00000317991 BRI3O95415 125 aa16.38■□□□□ 0.21
GRAMD1A-201ENST00000317991 IGLV1-40P01703 118 aa16.38■□□□□ 0.21
GRAMD1A-201ENST00000317991 NDUFA12Q9UI09 145 aa16.38■□□□□ 0.21
GRAMD1A-201ENST00000317991 GAGE12JA6NER3 117 aa16.37■□□□□ 0.21
GRAMD1A-201ENST00000317991 GAGE7O76087 117 aa16.37■□□□□ 0.21
GRAMD1A-201ENST00000317991 GAGE12FP0CL80 117 aa16.37■□□□□ 0.21
GRAMD1A-201ENST00000317991 GAGE12GP0CL81 117 aa16.37■□□□□ 0.21
GRAMD1A-201ENST00000317991 GAGE12IP0CL82 117 aa16.37■□□□□ 0.21
GRAMD1A-201ENST00000317991 GAGE4Q13068 117 aa16.37■□□□□ 0.21
GRAMD1A-201ENST00000317991 C10orf99Q6UWK7 81 aa16.37■□□□□ 0.21
GRAMD1A-201ENST00000317991 PRM2P04554 102 aa16.36■□□□□ 0.21
GRAMD1A-201ENST00000317991 DAND5Q8N907 189 aa16.36■□□□□ 0.21
GRAMD1A-201ENST00000317991 DUX3Q96PT4 197 aa16.36■□□□□ 0.21
GRAMD1A-201ENST00000317991 MRPS36P82909 103 aaKnown RBP16.36■□□□□ 0.21
GRAMD1A-201ENST00000317991 CFAP46Q8IYW2 2715 aa16.36■□□□□ 0.21
GRAMD1A-201ENST00000317991 A6NDX4 124 aa16.35■□□□□ 0.21
GRAMD1A-201ENST00000317991 KLRB1Q12918 225 aa16.35■□□□□ 0.21
GRAMD1A-201ENST00000317991 ZFYVE26Q68DK2 2539 aa16.35■□□□□ 0.21
GRAMD1A-201ENST00000317991 IGHV1-58A0A0C4DH39 117 aa16.34■□□□□ 0.21
GRAMD1A-201ENST00000317991 LINC01600Q96MT4 127 aa16.34■□□□□ 0.21
GRAMD1A-201ENST00000317991 CUBNO60494 3623 aa16.34■□□□□ 0.21
GRAMD1A-201ENST00000317991 IGSF10Q6WRI0 2623 aa16.34■□□□□ 0.21
GRAMD1A-201ENST00000317991 IGHV4-61A0A0C4DH41 118 aa16.34■□□□□ 0.21
GRAMD1A-201ENST00000317991 KNCNA6PVL3 124 aa16.34■□□□□ 0.21
GRAMD1A-201ENST00000317991 K7EMT4 169 aa16.34■□□□□ 0.21
GRAMD1A-201ENST00000317991 PRORYQ9H606 182 aa16.33■□□□□ 0.2
GRAMD1A-201ENST00000317991 USP24Q9UPU5 2620 aa16.32■□□□□ 0.2
GRAMD1A-201ENST00000317991 RBMY1A1P0DJD3 496 aaKnown RBP16.32■□□□□ 0.2
GRAMD1A-201ENST00000317991 RBMY1CP0DJD4 496 aa16.32■□□□□ 0.2
GRAMD1A-201ENST00000317991 SNRPD3P62318 126 aaKnown RBP16.32■□□□□ 0.2
GRAMD1A-201ENST00000317991 RBMY1FQ15415 496 aaKnown RBP16.32■□□□□ 0.2
GRAMD1A-201ENST00000317991 MIAQ16674 131 aa16.32■□□□□ 0.2
GRAMD1A-201ENST00000317991 Q6Q795 121 aa16.31■□□□□ 0.2
GRAMD1A-201ENST00000317991 VSIG2Q96IQ7 327 aa16.31■□□□□ 0.2
GRAMD1A-201ENST00000317991 SPANXDQ9BXN6 97 aa16.31■□□□□ 0.2
GRAMD1A-201ENST00000317991 SPANXCQ9NY87 97 aa16.31■□□□□ 0.2
GRAMD1A-201ENST00000317991 DUX5Q96PT3 197 aa16.31■□□□□ 0.2
GRAMD1A-201ENST00000317991 PYGO1Q9Y3Y4 419 aa16.31■□□□□ 0.2
GRAMD1A-201ENST00000317991 COX6CP09669 75 aa16.3■□□□□ 0.2
GRAMD1A-201ENST00000317991 CFHR3Q02985 330 aa16.3■□□□□ 0.2
GRAMD1A-201ENST00000317991 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.29■□□□□ 0.2
GRAMD1A-201ENST00000317991 IGKV2-29A2NJV5 120 aaPredicted RBP16.29■□□□□ 0.2
GRAMD1A-201ENST00000317991 TMEM61Q8N0U2 210 aa16.29■□□□□ 0.2
GRAMD1A-201ENST00000317991 NACAE9PAV3 2078 aa16.29■□□□□ 0.2
GRAMD1A-201ENST00000317991 C19orf84I3L1E1 186 aa16.29■□□□□ 0.2
GRAMD1A-201ENST00000317991 K7EQG2 157 aa16.29■□□□□ 0.2
GRAMD1A-201ENST00000317991 Q6ZSN1 163 aa16.29■□□□□ 0.2
GRAMD1A-201ENST00000317991 LST1O00453 97 aa16.28■□□□□ 0.2
GRAMD1A-201ENST00000317991 H3BT86 120 aa16.27■□□□□ 0.2
GRAMD1A-201ENST00000317991 TNFRSF18Q9Y5U5 241 aa16.27■□□□□ 0.19
GRAMD1A-201ENST00000317991 IGHV3-38A0A0C4DH36 116 aa16.26■□□□□ 0.19
GRAMD1A-201ENST00000317991 EPG5Q9HCE0 2579 aa16.26■□□□□ 0.19
GRAMD1A-201ENST00000317991 SYNJ2BPP57105 145 aa16.25■□□□□ 0.19
GRAMD1A-201ENST00000317991 TINCRA0A1B0GVN0 87 aa16.25■□□□□ 0.19
GRAMD1A-201ENST00000317991 CHCHD7Q9BUK0 85 aa16.25■□□□□ 0.19
GRAMD1A-201ENST00000317991 TRGV11A0A075B6L2 103 aa16.24■□□□□ 0.19
GRAMD1A-201ENST00000317991 CHCHD5Q9BSY4 110 aa16.24■□□□□ 0.19
GRAMD1A-201ENST00000317991 UBE2D4Q9Y2X8 147 aa16.24■□□□□ 0.19
GRAMD1A-201ENST00000317991 A0A0U1RRA0 63 aa16.24■□□□□ 0.19
GRAMD1A-201ENST00000317991 PSMB8P28062 276 aa16.24■□□□□ 0.19
GRAMD1A-201ENST00000317991 CDKN2A-AS1Q9UH64 79 aa16.23■□□□□ 0.19
GRAMD1A-201ENST00000317991 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.23■□□□□ 0.19
GRAMD1A-201ENST00000317991 LINC00467Q9BRT7 94 aa16.23■□□□□ 0.19
GRAMD1A-201ENST00000317991 AVPP01185 164 aa16.22■□□□□ 0.19
GRAMD1A-201ENST00000317991 C3orf56Q8N813 242 aa16.22■□□□□ 0.19
GRAMD1A-201ENST00000317991 CITED2Q99967 270 aaPredicted RBP16.22■□□□□ 0.19
GRAMD1A-201ENST00000317991 SMIM20Q8N5G0 67 aa16.22■□□□□ 0.19
GRAMD1A-201ENST00000317991 ZNF625Q96I27 306 aaPredicted RBP16.22■□□□□ 0.19
GRAMD1A-201ENST00000317991 ZANQ9Y493 2812 aa16.21■□□□□ 0.19
GRAMD1A-201ENST00000317991 MEIG1Q5JSS6 88 aa16.2■□□□□ 0.18
GRAMD1A-201ENST00000317991 DEFB121Q5J5C9 76 aa16.19■□□□□ 0.18
GRAMD1A-201ENST00000317991 TMEM101Q96IK0 257 aa16.18■□□□□ 0.18
GRAMD1A-201ENST00000317991 PIMREGQ9BSJ6 248 aa16.18■□□□□ 0.18
GRAMD1A-201ENST00000317991 YAE1D1Q9NRH1 226 aa16.18■□□□□ 0.18
GRAMD1A-201ENST00000317991 COX6A2Q02221 97 aa16.18■□□□□ 0.18
GRAMD1A-201ENST00000317991 FLNCQ14315 2725 aa16.17■□□□□ 0.18
GRAMD1A-201ENST00000317991 C2CD3Q4AC94 2353 aa16.17■□□□□ 0.18
GRAMD1A-201ENST00000317991 IGHV4-59P01825 116 aa16.17■□□□□ 0.18
GRAMD1A-201ENST00000317991 SPANXA1Q9NS26 97 aa16.17■□□□□ 0.18
GRAMD1A-201ENST00000317991 FAM240AA0A1B0GVK7 77 aa16.16■□□□□ 0.18
GRAMD1A-201ENST00000317991 EDA2RQ9HAV5 297 aa16.16■□□□□ 0.18
GRAMD1A-201ENST00000317991 IGHV4-30-2A0A087WSY4 118 aa16.16■□□□□ 0.18
GRAMD1A-201ENST00000317991 USP9YO00507 2555 aaPredicted RBP16.16■□□□□ 0.18
GRAMD1A-201ENST00000317991 MRPL23Q16540 153 aaKnown RBP16.15■□□□□ 0.18
GRAMD1A-201ENST00000317991 Q8N2B8 174 aa16.15■□□□□ 0.18
GRAMD1A-201ENST00000317991 HERV-K104P63124 156 aa16.14■□□□□ 0.17
GRAMD1A-201ENST00000317991 C10orf105Q8TEF2 133 aa16.14■□□□□ 0.17
GRAMD1A-201ENST00000317991 LINC00308Q8TCZ7 52 aa16.14■□□□□ 0.17
GRAMD1A-201ENST00000317991 Q9H8V8 135 aa16.14■□□□□ 0.17
GRAMD1A-201ENST00000317991 RBMY1BA6NDE4 496 aaKnown RBP16.13■□□□□ 0.17
GRAMD1A-201ENST00000317991 RBMY1EA6NEQ0 496 aaKnown RBP16.13■□□□□ 0.17
GRAMD1A-201ENST00000317991 RBMY1DP0C7P1 496 aaKnown RBP16.13■□□□□ 0.17
GRAMD1A-201ENST00000317991 DEFB131AP59861 70 aa16.13■□□□□ 0.17
GRAMD1A-201ENST00000317991 NDUFA1O15239 70 aa16.13■□□□□ 0.17
GRAMD1A-201ENST00000317991 NOTCH3Q9UM47 2321 aa16.13■□□□□ 0.17
GRAMD1A-201ENST00000317991 TIMM17BO60830 172 aa16.12■□□□□ 0.17
GRAMD1A-201ENST00000317991 NDUFA7O95182 113 aa16.12■□□□□ 0.17
GRAMD1A-201ENST00000317991 TRBV7-7A0A0K0K1E9 115 aa16.12■□□□□ 0.17
GRAMD1A-201ENST00000317991 MSMBP08118 114 aa16.12■□□□□ 0.17
GRAMD1A-201ENST00000317991 SHISA2Q6UWI4 295 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms